Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g045030 Solanum pennellii HOM05D004017 ORTHO05D004612 7.0e-153 543.9 268 100.0
Solyc01g102630.4 Solanum lycopersicum HOM05D004017 ORTHO05D004612 4.3e-70 268.9 340 50.0
Solyc01g110640.2 Solanum lycopersicum HOM05D004017 ORTHO05D013629 8.3e-21 105.1 105 54.3
Sopen02g037880 Solanum pennellii HOM05D004017 ORTHO05D004612 1.6e-19 100.9 83 67.5
CAN.G1238.14 Capsicum annuum HOM05D004017 ORTHO05D004612 2.0e-19 100.5 143 48.3
Solyc02g082660.3 Solanum lycopersicum HOM05D004017 ORTHO05D004612 3.5e-19 99.8 133 49.6
Nitab4.5_0004608g0010 Nicotiana tabacum HOM05D004017 ORTHO05D004612 1.0e-18 98.2 123 52.0
Sopen02g027400 Solanum pennellii HOM05D004017 ORTHO05D004612 2.9e-18 96.7 133 48.9
Nitab4.5_0001467g0040 Nicotiana tabacum HOM05D004017 ORTHO05D004612 1.9e-17 94.0 123 51.2
Sopen02g028020 Solanum pennellii HOM05D004017 ORTHO05D004612 3.3e-17 93.2 79 65.8
PGSC0003DMG400023778 Solanum tuberosum HOM05D004017 ORTHO05D004612 1.6e-16 90.9 93 59.1
Peaxi162Scf00121g02447 Petunia axillaris HOM05D004017 ORTHO05D004612 1.4e-15 87.8 96 55.2
Sopen01g052810 Solanum pennellii HOM05D004017 ORTHO05D004612 1.4e-15 87.8 55 76.4
Sopen02g027370 Solanum pennellii HOM05D004017 ORTHO05D004612 1.2e-14 84.7 51 76.5
Sopen02g027550 Solanum pennellii HOM05D004017 ORTHO05D004612 9.8e-14 81.6 119 46.2
Nitab4.5_0001467g0030 Nicotiana tabacum HOM05D004017 ORTHO05D004612 1.8e-12 77.4 159 36.5
Gohir.D03G001700 Gossypium hirsutum HOM05D004017 ORTHO05D004612 7.0e-12 75.5 131 42.0
Sopen02g027270 Solanum pennellii HOM05D004017 ORTHO05D004612 7.0e-12 75.5 69 65.2
Sopen02g033630 Solanum pennellii HOM05D000936 ORTHO05D015151 7.0e-12 75.5 80 55.0
Sopen02g033740 Solanum pennellii HOM05D004017 ORTHO05D015151 1.2e-11 74.7 79 55.7
GSVIVG01026635001 Vitis vinifera HOM05D004017 ORTHO05D004612 2.0e-11 73.9 79 53.2
Sopen02g027130 Solanum pennellii HOM05D004017 ORTHO05D004612 2.7e-11 73.6 76 59.2
Nitab4.5_0004608g0030 Nicotiana tabacum HOM05D004017 ORTHO05D004612 3.5e-11 73.2 49 65.3
Sopen02g033710 Solanum pennellii HOM05D004017 ORTHO05D004612 5.9e-11 72.4 51 68.6
Sopen02g033750 Solanum pennellii HOM05D004017 ORTHO05D004612 5.9e-11 72.4 51 68.6
TAR628G0231 Trochodendron aralioides HOM05D004017 ORTHO05D004612 1.0e-10 71.6 79 51.9
Ciclev10024702m.g Citrus clementina HOM05D004017 ORTHO05D004612 1.7e-10 70.9 79 50.6
Gohir.A02G178100 Gossypium hirsutum HOM05D004017 ORTHO05D004612 2.9e-10 70.1 131 40.5
Thecc.01G005000 Theobroma cacao HOM05D004017 ORTHO05D004612 1.5e-09 67.8 79 51.9
Aqoxy6G01621 Aquilegia oxysepala HOM05D004017 ORTHO05D004612 1.9e-09 67.4 79 49.4
QL06p053019 Quercus lobata HOM05D004017 ORTHO05D004612 2.5e-09 67.0 78 52.6
Ah.03g142850 Amaranthus hybridus HOM05D004017 ORTHO05D004612 5.6e-09 65.9 120 36.7
Solyc02g090045.1 Solanum lycopersicum HOM05D004017 ORTHO05D004612 7.3e-09 65.5 46 71.7
AUR62003744 Chenopodium quinoa HOM05D004017 ORTHO05D004612 1.2e-08 64.7 87 43.7
AUR62002051 Chenopodium quinoa HOM05D004017 ORTHO05D004612 2.1e-08 63.9 87 42.5
Eucgr.J02538 Eucalyptus grandis HOM05D004017 ORTHO05D004612 2.1e-08 63.9 79 46.8
Dinv28320 Davidia involucrata HOM05D004017 ORTHO05D004612 2.8e-08 63.5 79 50.6
Duzib147G1448 Durio zibethinus HOM05D004017 ORTHO05D004612 3.6e-08 63.2 79 50.6
HanXRQChr14g0442551 Helianthus annuus HOM05D004017 ORTHO05D004612 3.6e-08 63.2 79 48.1
ECA238G2486 Erigeron canadensis HOM05D004017 ORTHO05D004612 4.7e-08 62.8 79 45.6
Potri.005G101900 Populus trichocarpa HOM05D004017 ORTHO05D004612 4.7e-08 62.8 81 49.4
Cpa.g.sc6.367 Carica papaya HOM05D004017 ORTHO05D004612 6.1e-08 62.4 115 40.9
Sed0025898 Sechium edule HOM05D004017 ORTHO05D004612 8.0e-08 62.0 79 49.4
TWI09G1144 Tripterygium wilfordii HOM05D004017 ORTHO05D004612 8.0e-08 62.0 79 48.1
Hma1.2p1_0300F.1_g117960 Hydrangea macrophylla HOM05D004017 ORTHO05D004612 1.0e-07 61.6 79 46.8
MD02G1114700 Malus domestica HOM05D004017 ORTHO05D004612 1.0e-07 61.6 155 34.8
FAN26G0543 Fragaria x ananassa HOM05D004017 ORTHO05D004612 1.4e-07 61.2 79 48.1
Sc03g0003980 Simmondsia chinensis HOM05D004017 ORTHO05D004612 1.4e-07 61.2 156 30.8
PGSC0003DMG401018040 Solanum tuberosum HOM05D004017 ORTHO05D004612 1.4e-07 61.2 59 54.2
FAN23G1226 Fragaria x ananassa HOM05D004017 ORTHO05D004612 1.8e-07 60.8 79 49.4
MD15G1230500 Malus domestica HOM05D004017 ORTHO05D004612 1.8e-07 60.8 79 49.4
Manes.02G114300 Manihot esculenta HOM05D004017 ORTHO05D004612 1.8e-07 60.8 78 52.6
FvH4_1g10270 Fragaria vesca HOM05D004017 ORTHO05D004612 2.3e-07 60.5 79 48.1
FAN19G1215 Fragaria x ananassa HOM05D004017 ORTHO05D004612 2.3e-07 60.5 79 48.1
Prupe.7G183500 Prunus persica HOM05D004017 ORTHO05D004612 4.0e-07 59.7 79 46.8
Hund03598 Selenicereus undatus HOM05D004017 ORTHO05D004612 4.0e-07 59.7 79 45.6
Solyc01g150174.1 Solanum lycopersicum HOM05D043770 ORTHO05D018125 4.0e-07 59.7 53 54.7
Dinv28321 Davidia involucrata HOM05D004017 ORTHO05D004612 6.8e-07 58.9 120 30.8
Sopen02g031130 Solanum pennellii HOM05D004017 ORTHO05D004612 1.5e-06 57.8 42 73.8
Actinidia22894 Actinidia chinensis HOM05D004017 ORTHO05D004612 2.0e-06 57.4 78 44.9
RcHm_v2.0_Chr2g0097091 Rosa chinensis HOM05D004017 ORTHO05D004612 2.0e-06 57.4 79 46.8
Cc07_g11910 Coffea canephora HOM05D004017 ORTHO05D004612 2.6e-06 57.0 79 44.3
ATR0807G072 Amborella trichopoda HOM05D004017 ORTHO05D004612 3.4e-06 56.6 79 41.8
MELO3C013715.2 Cucumis melo HOM05D004017 ORTHO05D004612 3.4e-06 56.6 79 46.8
PGR142G4352 Punica granatum HOM05D004017 ORTHO05D004612 3.4e-06 56.6 82 42.7
Glyma.01G158400 Glycine max HOM05D004017 ORTHO05D004612 4.4e-06 56.2 117 34.2
Oeu045735.2 Olea europaea HOM05D004017 ORTHO05D004612 4.4e-06 56.2 79 44.3
CiPaw.07G002300 Carya illinoinensis HOM05D004017 ORTHO05D004612 5.8e-06 55.8 79 45.6
Ca_24985_v3 Cicer arietinum L. HOM05D004017 ORTHO05D004612 5.8e-06 55.8 79 40.5
CsaV3_3G000200 Cucumis sativus L. HOM05D004017 ORTHO05D004612 9.8e-06 55.1 79 45.6
HPP92_020507 Vanilla planifolia HOM05D004017 ORTHO05D004612 9.8e-06 55.1 78 43.6


User provided reference genes

Program Settings