Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 3.3e-294 1014.2 491 100.0
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 1.1e-292 1009.2 491 99.4
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 8.6e-266 919.8 492 92.3
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 3.6e-256 887.9 491 87.8
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.1e-243 845.5 476 85.5
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 6.8e-231 803.9 447 85.7
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 5.5e-196 688.0 500 68.2
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 2.4e-191 672.5 503 67.0
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 1.9e-188 662.9 498 65.7
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 2.5e-188 662.5 495 66.3
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 3.2e-188 662.1 493 67.1
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 4.2e-188 661.8 497 66.0
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 4.1e-183 645.2 489 65.0
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 6.9e-183 644.4 491 65.0
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.0e-182 642.9 491 65.2
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 3.4e-182 642.1 495 65.1
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 1.0e-181 640.6 489 65.0
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 3.8e-181 638.6 495 64.2
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 1.9e-180 636.3 491 65.0
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 9.4e-180 634.0 494 63.6
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 2.1e-179 632.9 496 65.1
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 3.6e-179 632.1 517 62.9
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 2.3e-178 629.4 499 64.7
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.1e-177 627.1 491 64.0
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 1.5e-177 626.7 503 62.4
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 2.6e-177 625.9 479 64.1
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 2.6e-177 625.9 479 64.1
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 5.7e-177 624.8 482 63.5
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 9.7e-177 624.0 489 63.0
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 2.2e-176 622.9 483 64.4
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 2.8e-176 622.5 506 63.0
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 3.7e-176 622.1 494 63.2
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 3.7e-176 622.1 492 64.0
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 4.8e-176 621.7 493 63.3
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 1.4e-175 620.2 496 62.9
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.0e-174 616.3 491 63.5
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 4.5e-174 615.1 502 62.4
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 4.5e-174 615.1 491 62.9
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 7.7e-174 614.4 482 62.9
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 2.2e-173 612.8 503 63.4
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 1.4e-172 610.1 535 59.1
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 1.9e-172 609.8 468 64.7
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.9e-172 609.8 463 63.9
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 3.2e-172 609.0 496 62.1
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 5.5e-172 608.2 490 62.4
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 4.7e-171 605.1 491 61.5
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 2.0e-169 599.7 490 62.7
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 2.0e-169 599.7 502 60.4
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 9.7e-169 597.4 495 61.0
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 2.2e-168 596.3 506 60.1
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 8.2e-168 594.3 484 62.2
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 7.0e-167 591.3 496 60.5
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 9.1e-167 590.9 510 60.0
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 9.1e-167 590.9 517 60.3
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 1.2e-166 590.5 483 61.5
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 1.2e-166 590.5 507 58.6
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 6.5e-165 584.7 496 59.7
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 9.4e-164 580.9 466 63.1
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 9.4e-164 580.9 496 59.5
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 1.0e-162 577.4 493 59.6
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 1.0e-162 577.4 470 61.7
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.3e-162 576.2 418 66.7
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 8.8e-162 574.3 495 59.6
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 8.8e-162 574.3 346 80.9
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 1.2e-161 573.9 493 59.4
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 1.5e-161 573.5 490 60.0
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 1.5e-161 573.5 429 66.2
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 3.4e-161 572.4 493 58.8
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 3.4e-161 572.4 418 66.7
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 3.4e-161 572.4 490 60.2
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 5.7e-161 571.6 478 61.9
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 5.7e-161 571.6 489 58.9
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 5.7e-161 571.6 489 58.9
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 7.5e-161 571.2 495 60.2
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 1.7e-160 570.1 504 57.9
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 4.1e-159 565.5 441 63.0
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 4.1e-159 565.5 491 59.7
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 9.1e-159 564.3 419 64.7
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 1.2e-158 563.9 495 59.2
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 3.8e-157 558.9 511 55.6
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 5.0e-157 558.5 498 57.6
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 1.5e-156 557.0 489 56.9
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 7.2e-156 554.7 499 57.9
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 4.0e-154 548.9 499 56.9
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 1.2e-153 547.4 499 58.3
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 4.8e-152 542.0 495 56.4
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 8.3e-152 541.2 464 61.0
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 1.4e-151 540.4 491 56.8
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 1.6e-150 537.0 493 57.0
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 4.5e-150 535.4 521 53.7
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 2.3e-149 533.1 507 56.6
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 5.5e-148 528.5 498 55.0
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 4.4e-145 518.8 457 59.1
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 5.2e-138 495.4 508 51.0
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 9.8e-137 491.1 504 52.2
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 9.8e-137 491.1 504 52.2
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 7.0e-135 485.0 434 57.4
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 5.6e-132 475.3 493 54.4
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.1e-124 451.1 318 68.9
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 1.5e-124 450.7 563 45.5
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 4.7e-123 445.7 489 48.3
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 5.8e-121 438.7 543 44.2
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 3.7e-120 436.0 410 56.3
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 3.1e-114 416.4 483 48.7
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 5.8e-105 385.6 354 57.6
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 7.6e-105 385.2 314 62.4
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 3.8e-104 382.9 400 53.0
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 1.3e-99 367.9 461 44.9
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 9.0e-98 361.7 497 44.7
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 1.2e-81 308.1 291 54.3
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 7.6e-81 305.4 143 98.6
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 6.1e-70 269.2 145 93.1
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 3.9e-61 240.0 314 45.9
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 2.6e-60 237.3 343 37.0
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 4.8e-59 233.0 383 35.2
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 4.5e-49 199.9 823 24.9
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 7.0e-42 176.0 337 33.5
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 8.0e-38 162.5 95 76.8
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 1.7e-27 128.3 131 53.4
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 3.9e-24 117.1 73 76.7
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.7e-17 94.4 144 38.9
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 5.2e-13 80.1 115 42.6


User provided reference genes

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