Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g041220 Solanum pennellii HOM05D005810 ORTHO05D007279 1.7e-70 269.2 139 100.0
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.2e-55 219.9 143 85.3
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 2.5e-53 212.2 131 87.0
Nitab4.5_0005729g0070 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.4e-48 196.4 143 77.6
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 3.0e-38 162.2 115 79.1
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 4.1e-32 141.7 150 54.0
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 7.1e-32 141.0 145 55.9
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 2.1e-31 139.4 145 55.9
Dinv13660 Davidia involucrata HOM05D005810 ORTHO05D007279 6.0e-31 137.9 143 58.0
Hma1.2p1_0083F.1_g042850 Hydrangea macrophylla HOM05D005810 ORTHO05D007279 7.8e-31 137.5 141 56.0
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 7.8e-31 137.5 139 59.0
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 1.3e-30 136.7 142 54.2
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 5.1e-30 134.8 143 53.8
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 6.6e-30 134.4 142 52.1
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 1.1e-29 133.7 138 54.3
Cc02_g31840 Coffea canephora HOM05D005810 ORTHO05D007279 4.3e-29 131.7 140 56.4
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 5.6e-29 131.3 132 53.8
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 9.5e-29 130.6 140 52.9
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 9.5e-29 130.6 141 55.3
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 2.8e-28 129.0 142 50.7
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 2.8e-28 129.0 148 52.0
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 4.7e-28 128.3 144 54.2
Haze_04340 Corylus avellana HOM05D005810 ORTHO05D007279 6.2e-28 127.9 134 53.7
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 1.1e-27 127.1 147 51.7
CsaV3_UNG004060 Cucumis sativus L. HOM05D005810 ORTHO05D007279 1.8e-27 126.3 139 53.2
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 2.3e-27 125.9 141 50.4
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 3.1e-27 125.6 139 54.0
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 3.1e-27 125.6 141 50.4
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 3.1e-27 125.6 145 49.7
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 4.0e-27 125.2 140 53.6
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 5.2e-27 124.8 151 51.0
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 5.2e-27 124.8 137 55.5
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 5.2e-27 124.8 144 52.1
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 5.2e-27 124.8 143 51.0
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 6.8e-27 124.4 136 51.5
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 6.8e-27 124.4 139 54.0
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 1.5e-26 123.2 129 56.6
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 2.0e-26 122.9 138 50.7
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 2.6e-26 122.5 138 52.9
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 2.6e-26 122.5 142 50.0
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 2.6e-26 122.5 137 53.3
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 4.4e-26 121.7 138 49.3
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 5.8e-26 121.3 145 51.0
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 5.8e-26 121.3 139 53.2
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 7.6e-26 120.9 138 50.7
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 7.6e-26 120.9 139 54.0
FAN09G1409 Fragaria x ananassa HOM05D005810 ORTHO05D007279 7.6e-26 120.9 156 49.4
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 7.6e-26 120.9 138 50.7
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 9.9e-26 120.6 144 50.0
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 1.3e-25 120.2 147 47.6
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 1.3e-25 120.2 147 47.6
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 1.7e-25 119.8 140 49.3
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 2.2e-25 119.4 140 49.3
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 2.9e-25 119.0 141 48.2
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 3.7e-25 118.6 139 51.8
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 4.9e-25 118.2 138 51.4
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 1.1e-24 117.1 145 51.7
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 1.1e-24 117.1 141 49.6
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 1.9e-24 116.3 144 48.6
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 2.4e-24 115.9 159 47.2
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 3.2e-24 115.5 144 48.6
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 4.1e-24 115.2 147 50.3
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 9.2e-24 114.0 137 47.4
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 1.2e-23 113.6 137 48.2
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 1.2e-23 113.6 137 48.2
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 1.2e-23 113.6 137 48.2
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 1.6e-23 113.2 141 47.5
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 2.1e-23 112.8 144 48.6
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 2.7e-23 112.5 144 48.6
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 3.5e-23 112.1 137 46.7
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 3.5e-23 112.1 141 48.2
CsaV3_1G045610 Cucumis sativus L. HOM05D005810 ORTHO05D007279 4.6e-23 111.7 131 51.1
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 6.0e-23 111.3 131 50.4
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 1.3e-22 110.2 139 48.2
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 3.9e-22 108.6 133 49.6
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 5.1e-22 108.2 140 48.6
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 5.1e-22 108.2 139 47.5
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 8.6e-22 107.5 131 48.1
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 5.6e-21 104.8 149 43.6
ClCG06G009160 Citrullus lanatus HOM05D005810 ORTHO05D007279 9.6e-21 104.0 133 47.4
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 1.6e-20 103.2 137 45.3
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 1.6e-20 103.2 137 45.3
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 4.7e-20 101.7 129 47.3
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 8.1e-20 100.9 139 45.3
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 6.8e-19 97.8 124 50.8
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 6.8e-19 97.8 137 43.1
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 8.9e-19 97.4 136 44.9
AagrBONN_evm.TU.Sc2ySwM_362.2882 Anthoceros agrestis HOM05D005810 ORTHO05D007279 5.8e-18 94.7 137 43.8
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.3e-17 93.6 131 47.3
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 6.4e-17 91.3 138 42.8
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 6.0e-15 84.7 122 43.4
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 1.3e-14 83.6 139 39.6
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 4.3e-13 78.6 139 38.8
Atru.chr2.785 Acer truncatum HOM05D005810 ORTHO05D007279 1.3e-12 77.0 57 64.9
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 6.2e-12 74.7 90 43.3
CiPaw.07G064900 Carya illinoinensis HOM05D005810 ORTHO05D007279 4.4e-10 68.6 36 91.7
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 2.2e-09 66.2 131 35.9
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 4.9e-09 65.1 151 32.5
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 6.0e-07 58.2 136 30.1


User provided reference genes

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