Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 1.3e-72 276.2 133 100.0
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 1.3e-72 276.2 133 100.0
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 3.9e-72 274.6 133 99.2
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 3.4e-68 261.5 131 94.7
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 4.5e-68 261.2 133 92.5
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 5.8e-68 260.8 129 95.3
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 4.2e-66 254.6 130 91.5
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 2.4e-61 238.8 127 87.4
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 2.4e-61 238.8 121 95.0
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 7.7e-60 233.8 127 85.0
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 1.3e-59 233.0 127 83.5
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 1.9e-58 229.2 129 80.6
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 2.5e-58 228.8 126 82.5
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 3.2e-58 228.4 127 84.3
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.6e-57 226.1 126 82.5
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 1.6e-57 226.1 131 79.4
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 2.1e-57 225.7 126 82.5
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 3.6e-57 224.9 131 78.6
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 4.6e-57 224.6 127 81.1
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 7.9e-57 223.8 126 82.5
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 7.9e-57 223.8 127 80.3
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 7.9e-57 223.8 131 77.1
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 1.0e-56 223.4 127 81.1
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 1.0e-56 223.4 127 80.3
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 1.0e-56 223.4 126 82.5
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 1.8e-56 222.6 126 80.2
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 3.0e-56 221.9 131 80.2
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 3.9e-56 221.5 131 77.9
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 5.1e-56 221.1 129 79.8
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 6.7e-56 220.7 131 79.4
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 6.7e-56 220.7 126 81.0
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 6.7e-56 220.7 127 80.3
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 1.1e-55 219.9 130 80.8
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 1.5e-55 219.5 129 80.6
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.5e-55 219.5 131 78.6
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 2.0e-55 219.2 127 80.3
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 2.5e-55 218.8 126 79.4
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 3.3e-55 218.4 131 79.4
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 3.3e-55 218.4 127 78.7
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 4.3e-55 218.0 127 79.5
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 5.7e-55 217.6 131 80.2
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 7.4e-55 217.2 129 78.3
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 7.4e-55 217.2 129 78.3
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 7.4e-55 217.2 126 80.2
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 9.7e-55 216.9 127 78.0
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.3e-54 216.5 131 77.9
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 1.3e-54 216.5 129 77.5
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 2.2e-54 215.7 127 78.0
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 2.2e-54 215.7 127 78.0
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 3.7e-54 214.9 129 76.7
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 3.7e-54 214.9 127 78.7
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 6.3e-54 214.2 133 73.7
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 8.2e-54 213.8 129 77.5
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 8.2e-54 213.8 129 76.7
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 1.1e-53 213.4 126 78.6
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 1.1e-53 213.4 127 75.6
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 1.4e-53 213.0 127 77.2
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.8e-53 212.6 127 80.3
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 2.4e-53 212.2 126 78.6
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 3.1e-53 211.8 126 77.0
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 3.1e-53 211.8 131 75.6
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 4.1e-53 211.5 129 76.0
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 4.1e-53 211.5 125 77.6
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 5.3e-53 211.1 128 75.8
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 5.3e-53 211.1 128 75.8
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 6.9e-53 210.7 125 80.0
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 9.1e-53 210.3 125 72.8
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 9.1e-53 210.3 129 73.6
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 9.1e-53 210.3 113 87.6
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 1.2e-52 209.9 127 76.4
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 1.2e-52 209.9 127 76.4
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 1.2e-52 209.9 127 77.2
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 1.5e-52 209.5 133 72.9
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 3.4e-52 208.4 124 78.2
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 4.5e-52 208.0 126 77.0
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 5.9e-52 207.6 133 72.9
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 7.7e-52 207.2 128 75.0
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 7.7e-52 207.2 165 63.0
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 1.0e-51 206.8 127 74.8
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.3e-51 206.5 123 77.2
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 1.7e-51 206.1 127 74.8
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 2.2e-51 205.7 127 74.0
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 3.8e-51 204.9 126 74.6
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 5.0e-51 204.5 126 73.0
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 6.5e-51 204.1 126 73.8
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 6.5e-51 204.1 126 73.8
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 6.5e-51 204.1 126 73.8
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 6.5e-51 204.1 126 73.8
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 6.5e-51 204.1 126 73.8
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 1.2e-49 199.9 128 68.0
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 2.7e-49 198.7 113 81.4
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 7.4e-47 190.7 126 65.9
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 2.8e-46 188.7 128 65.6
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 1.8e-45 186.0 125 66.4
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 5.3e-45 184.5 116 72.4
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.5e-44 183.0 127 63.0
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 8.5e-43 177.2 126 65.1
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 1.6e-41 172.9 126 58.7
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.0e-40 170.2 126 58.7
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 2.0e-39 166.0 110 75.5
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 4.5e-36 154.8 125 54.4
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 7.2e-34 147.5 118 58.5
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 2.6e-31 139.0 80 82.5
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.8e-29 132.9 129 48.8
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 3.1e-29 132.1 130 50.0
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 9.1e-29 130.6 120 51.7
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 2.7e-28 129.0 152 45.4
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 2.2e-27 125.9 99 63.6
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 6.1e-25 117.9 75 76.0
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 1.7e-19 99.8 54 79.6
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 2.3e-19 99.4 53 77.4
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 2.9e-19 99.0 68 69.1
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 4.7e-17 91.7 58 63.8
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 8.0e-17 90.9 53 71.7
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 1.0e-16 90.5 53 77.4
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.8e-09 65.9 43 67.4
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-09 65.1 43 65.1
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 3.1e-08 62.4 36 83.3


User provided reference genes

Program Settings