Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 0.0e+00 1151.7 588 100.0
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 0.0e+00 1122.8 588 97.3
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 4.5e-253 877.9 595 75.6
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 4.5e-197 691.8 600 60.0
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 8.6e-180 634.4 661 55.7
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 1.9e-179 633.3 609 56.8
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 9.5e-179 630.9 608 54.9
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 6.2e-178 628.2 577 58.6
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 4.9e-175 618.6 600 54.8
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 1.6e-173 613.6 600 53.2
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 4.6e-173 612.1 642 56.1
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 1.7e-172 610.1 601 54.1
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 2.5e-171 606.3 596 54.9
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 7.3e-171 604.7 598 54.5
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 7.3e-171 604.7 612 53.6
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 1.2e-170 604.0 594 53.5
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 2.0e-168 596.7 612 52.5
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 1.3e-167 594.0 655 51.8
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 6.0e-165 585.1 675 49.5
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 1.9e-163 580.1 590 50.8
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 5.6e-163 578.6 595 51.6
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 9.6e-163 577.8 586 51.2
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.6e-162 577.0 593 51.3
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 2.8e-162 576.2 597 52.4
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 4.7e-162 575.5 611 51.2
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 6.2e-162 575.1 587 52.5
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 6.8e-161 571.6 598 50.3
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 3.4e-160 569.3 590 52.4
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 1.3e-159 567.4 586 50.5
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 1.4e-158 563.9 593 49.7
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 1.9e-158 563.5 589 51.1
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.9e-158 563.5 601 50.4
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 5.4e-158 562.0 585 51.5
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 9.3e-158 561.2 603 50.7
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 1.2e-157 560.8 608 48.5
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 3.5e-157 559.3 619 48.8
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 1.3e-156 557.4 598 49.3
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 3.0e-156 556.2 590 51.0
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 5.1e-156 555.4 578 54.3
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 1.9e-155 553.5 619 48.5
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.5e-155 553.1 609 50.2
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 4.3e-155 552.4 619 48.3
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 1.3e-154 550.8 589 50.4
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 8.1e-154 548.1 592 50.2
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.1e-153 547.7 597 48.4
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 1.4e-153 547.4 592 48.0
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 5.3e-153 545.4 588 49.1
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.0e-152 543.5 609 49.8
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 3.4e-152 542.7 593 48.6
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 3.4e-152 542.7 591 49.2
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 4.4e-152 542.3 601 49.6
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 9.9e-152 541.2 602 50.5
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 1.3e-151 540.8 603 50.2
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 1.4e-150 537.3 586 50.0
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 5.6e-147 525.4 638 45.8
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 9.6e-147 524.6 593 45.9
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 1.8e-145 520.4 655 43.7
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 9.0e-145 518.1 590 50.3
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 3.4e-144 516.2 619 46.2
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.7e-143 513.8 605 47.6
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 2.7e-141 506.5 569 49.4
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 3.5e-141 506.1 551 51.0
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 4.8e-138 495.7 631 44.2
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 5.8e-136 488.8 644 45.2
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 2.9e-135 486.5 594 45.6
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 5.5e-134 482.3 584 46.7
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 1.6e-133 480.7 610 46.9
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 1.2e-128 464.5 597 44.9
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 1.3e-127 461.1 606 40.4
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 1.1e-126 458.0 602 44.7
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 4.2e-126 456.1 594 44.4
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.6e-122 444.1 597 43.4
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 1.4e-121 441.0 540 46.9
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 1.8e-121 440.7 591 42.8
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 9.0e-121 438.3 594 43.1
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 2.0e-120 437.2 595 41.8
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 7.7e-120 435.3 594 42.8
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 1.3e-119 434.5 612 41.5
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 1.3e-119 434.5 564 43.8
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.1e-118 431.4 533 43.9
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 4.6e-117 426.0 475 48.0
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 3.9e-116 422.9 594 41.8
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 8.5e-111 405.2 594 41.1
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 8.5e-111 405.2 302 72.2
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 5.5e-110 402.5 528 42.6
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 1.6e-109 401.0 589 41.9
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 3.6e-109 399.8 440 48.4
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 8.8e-108 395.2 486 46.7
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 8.8e-108 395.2 592 39.4
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 6.5e-103 379.0 502 43.8
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.2e-102 376.7 379 54.6
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.6e-101 373.2 379 54.6
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 2.3e-100 370.5 401 48.6
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.4e-97 361.3 375 53.6
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 2.2e-95 354.0 422 45.0
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.0e-92 345.1 582 36.8
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.1e-89 333.6 379 49.9
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 1.0e-87 328.6 307 55.7
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 8.3e-82 308.9 557 36.3
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 5.6e-78 296.2 443 39.5
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 8.3e-74 282.3 275 55.6
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 2.3e-60 237.7 159 79.9
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 2.3e-55 221.1 457 35.0
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.2e-45 188.7 517 28.4
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 4.7e-45 186.8 586 28.0
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 3.9e-39 167.2 271 37.3
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 1.5e-38 165.2 638 25.9
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 9.6e-38 162.5 603 24.7
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 5.8e-35 153.3 591 25.2
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 1.6e-32 145.2 154 46.8
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 2.7e-32 144.4 288 34.4
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.0e-31 141.0 89 71.9
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 9.6e-30 136.0 96 74.0
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 7.6e-27 126.3 161 39.8
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 2.1e-13 81.6 70 57.1
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 1.8e-12 78.6 123 41.5
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.3e-10 72.4 63 54.0
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 6.5e-10 70.1 252 24.6
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 8.4e-10 69.7 62 53.2
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.4e-09 68.9 68 50.0
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.2e-09 67.8 63 52.4
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 8.7e-07 59.7 51 54.9


User provided reference genes

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