Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 2.5e-256 888.3 443 100.0
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 5.0e-249 864.0 443 96.6
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 6.0e-226 787.3 443 88.3
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 1.6e-194 682.9 455 77.4
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 7.9e-194 680.6 420 81.2
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 2.1e-178 629.4 443 74.5
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 7.0e-158 561.2 432 63.9
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 9.1e-158 560.8 419 64.9
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 3.4e-152 542.3 441 62.6
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 9.7e-152 540.8 434 62.2
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 3.7e-151 538.9 454 61.7
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 5.9e-149 531.6 526 54.0
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 9.4e-147 524.2 473 58.1
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 3.0e-145 519.2 422 60.7
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 1.7e-143 513.5 423 58.9
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 1.6e-138 496.9 435 59.3
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 3.6e-138 495.7 427 56.7
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 4.7e-138 495.4 414 57.7
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.0e-137 494.2 413 58.1
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 1.4e-137 493.8 421 58.4
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.0e-136 490.0 446 53.6
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 5.7e-136 488.4 442 55.7
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 5.7e-136 488.4 416 57.5
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 3.7e-135 485.7 434 56.5
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 1.1e-134 484.2 420 57.4
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.2e-134 482.6 444 53.4
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 2.0e-133 479.9 441 54.9
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 5.9e-133 478.4 414 56.8
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 7.8e-133 478.0 428 56.1
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 1.0e-132 477.6 423 55.3
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 5.6e-131 471.9 426 56.8
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 4.7e-130 468.8 409 55.5
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 1.0e-129 467.6 419 52.7
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 1.0e-129 467.6 417 57.6
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 2.6e-128 463.0 437 53.1
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 2.6e-128 463.0 412 54.1
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 8.3e-127 458.0 440 52.0
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 1.1e-126 457.6 442 53.6
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 1.4e-126 457.2 427 54.3
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 2.4e-126 456.4 416 54.1
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 9.2e-126 454.5 421 53.9
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 9.2e-126 454.5 416 53.8
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 3.5e-125 452.6 380 58.2
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 6.0e-125 451.8 427 52.7
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 6.0e-125 451.8 427 52.5
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 1.3e-124 450.7 427 52.5
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 3.0e-124 449.5 427 52.2
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 3.9e-124 449.1 426 52.8
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 6.6e-124 448.4 427 51.5
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 8.6e-124 448.0 434 52.3
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 1.1e-123 447.6 426 51.9
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 1.1e-123 447.6 426 52.1
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 6.8e-121 438.3 444 50.5
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 2.0e-120 436.8 441 49.9
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 7.5e-120 434.9 446 50.7
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 3.7e-119 432.6 434 50.5
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 1.4e-118 430.6 432 50.0
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 7.1e-118 428.3 423 51.3
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 2.7e-117 426.4 426 50.5
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 3.5e-117 426.0 437 49.2
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 3.5e-117 426.0 434 49.8
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 6.0e-117 425.2 433 49.4
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 3.9e-116 422.5 419 51.3
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 3.3e-115 419.5 414 51.4
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 4.3e-115 419.1 415 50.8
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 1.2e-114 417.5 483 47.0
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 8.1e-114 414.8 432 49.3
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 1.4e-113 414.1 431 50.1
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.4e-113 414.1 313 65.2
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 1.8e-113 413.7 417 50.8
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 2.3e-113 413.3 429 50.1
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 2.3e-113 413.3 441 49.0
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 2.0e-112 410.2 444 47.5
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 9.9e-112 407.9 314 60.8
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 1.9e-110 403.7 309 64.7
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 4.1e-110 402.5 428 47.7
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 4.6e-109 399.1 310 60.0
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 6.2e-106 388.7 355 54.6
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 5.2e-105 385.6 413 45.8
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 1.2e-104 384.4 421 47.3
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 1.2e-104 384.4 415 47.0
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 2.2e-103 380.2 410 50.2
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 7.1e-102 375.2 370 51.9
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 2.3e-100 370.2 428 47.7
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 3.8e-95 352.8 422 46.2
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 8.4e-95 351.7 347 52.7
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 3.0e-92 343.2 313 58.5
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 9.3e-78 295.0 435 41.8
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.0e-76 290.0 464 43.8
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 5.1e-76 289.3 282 51.1
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 6.7e-76 288.9 464 43.5
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 9.6e-75 285.0 245 55.5
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.3e-74 284.6 421 39.4
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.3e-73 279.3 440 43.2
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.8e-71 273.1 462 42.4
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.6e-66 257.7 285 45.6
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.3e-65 252.7 438 41.1
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 1.5e-64 251.1 419 37.2
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 1.5e-64 251.1 419 37.2
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.1e-62 245.0 416 39.7
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 1.3e-55 221.5 200 56.0
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 8.5e-55 218.8 237 46.0
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.2e-53 214.9 153 67.3
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 1.0e-52 211.8 446 31.4
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 2.3e-52 210.7 208 50.5
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 2.3e-52 210.7 329 44.7
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 2.8e-50 203.8 285 40.0
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 2.7e-45 187.2 350 34.9
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 4.7e-45 186.4 226 46.9
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 8.0e-45 185.7 245 42.9
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 8.0e-45 185.7 192 50.0
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 1.8e-41 174.5 420 27.1
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 1.6e-40 171.4 231 44.2
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.6e-40 171.4 231 44.2
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.0e-39 168.7 154 54.5
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.1e-33 148.7 135 55.6
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.4e-33 148.3 159 45.9
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 1.9e-30 137.9 140 47.1
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 2.7e-29 134.0 104 63.5
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 1.0e-28 132.1 353 28.3
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 4.0e-28 130.2 119 57.1
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 1.5e-27 128.3 267 30.7
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 7.5e-27 125.9 135 43.7
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 1.1e-25 122.1 321 28.7
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 5.4e-25 119.8 90 60.0
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 5.4e-25 119.8 82 67.1
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 5.2e-20 103.2 117 47.0
Duzib133G0745 Durio zibethinus HOM05D002214 ORTHO05D007367 3.4e-11 73.9 67 44.8
Lj9C641T18 Lonicera japonica HOM05D002214 ORTHO05D007367 3.4e-11 73.9 96 45.8
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 7.0e-09 66.2 87 48.3
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.0e-07 62.4 76 47.4
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.9e-07 60.5 107 38.3


User provided reference genes

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