Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g022990 Solanum pennellii HOM05D024491 ORTHO05D000022 1.0e-81 306.6 147 100.0
Solyc01g057740.3 Solanum lycopersicum HOM05D024491 ORTHO05D000022 1.2e-77 293.1 147 95.9
Peaxi162Scf00079g00195 Petunia axillaris HOM05D000155 ORTHO05D000022 3.8e-20 102.1 124 41.1
CAN.G2020.2 Capsicum annuum HOM05D024491 ORTHO05D000022 6.6e-20 101.3 81 53.1
CAN.G1086.3 Capsicum annuum HOM05D024491 ORTHO05D000022 9.5e-19 97.4 93 47.3
Nitab4.5_0009185g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.5e-16 87.8 130 34.6
PGSC0003DMG400014751 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.1e-14 84.0 134 32.1
Nitab4.5_0002045g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.8e-14 83.2 128 34.4
Nitab4.5_0000254g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.1e-14 82.4 95 40.0
Nitab4.5_0000206g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-12 77.0 130 33.1
Nitab4.5_0002956g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-12 76.6 112 34.8
Peaxi162Scf00002g00074 Petunia axillaris HOM05D000155 ORTHO05D000022 6.6e-12 74.7 129 31.0
Nitab4.5_0005104g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.6e-12 74.3 127 30.7
CAN.G1598.9 Capsicum annuum HOM05D000155 ORTHO05D000022 1.1e-11 73.9 99 34.3
Nitab4.5_0000084g0340 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-11 73.9 129 32.6
Nitab4.5_0000613g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-11 73.9 101 36.6
Nitab4.5_0003347g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.5e-11 73.6 94 37.2
Nitab4.5_0000335g0250 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.5e-11 72.8 107 33.6
Nitab4.5_0003475g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.5e-11 72.8 127 31.5
Peaxi162Scf01149g10016 Petunia axillaris HOM05D000155 ORTHO05D000022 3.3e-11 72.4 93 41.9
Peaxi162Scf00477g00022 Petunia axillaris HOM05D000155 ORTHO05D000022 1.2e-10 70.5 109 34.9
Nitab4.5_0004637g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-10 69.7 110 31.8
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-10 69.7 79 40.5
PGSC0003DMG400013767 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.8e-10 69.3 90 34.4
Nitab4.5_0002922g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.7e-10 68.6 109 35.8
Nitab4.5_0008823g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.1e-10 68.2 107 32.7
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.0e-10 67.8 109 30.3
Nitab4.5_0000654g0140 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.4e-09 67.0 129 33.3
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 1.8e-09 66.6 105 37.1
CAN.G883.22 Capsicum annuum HOM05D000155 ORTHO05D000022 3.1e-09 65.9 80 33.8
Nitab4.5_0005413g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.0e-09 65.5 70 45.7
Sc05g0008160 Simmondsia chinensis HOM05D000155 ORTHO05D000022 4.0e-09 65.5 122 31.1
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 4.0e-09 65.5 106 36.8
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 4.0e-09 65.5 121 30.6
CAN.G389.8 Capsicum annuum HOM05D064608 ORTHO05D000022 6.8e-09 64.7 71 43.7
Peaxi162Scf00138g01512 Petunia axillaris HOM05D000155 ORTHO05D000022 6.8e-09 64.7 92 37.0
Peaxi162Scf00700g00035 Petunia axillaris HOM05D000155 ORTHO05D000022 6.8e-09 64.7 129 28.7
Peaxi162Scf00700g00339 Petunia axillaris HOM05D000273 ORTHO05D000022 6.8e-09 64.7 129 28.7
Nitab4.5_0000358g0080 Nicotiana tabacum HOM05D004990 ORTHO05D000022 8.9e-09 64.3 80 38.8
Peaxi162Scf00160g01638 Petunia axillaris HOM05D000155 ORTHO05D000022 8.9e-09 64.3 132 26.5
Sopen05g018930 Solanum pennellii HOM05D000155 ORTHO05D000022 8.9e-09 64.3 116 29.3
PGSC0003DMG400041332 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.5e-08 63.5 91 35.2
CANSAT01G2456 Cannabis sativa HOM05D000003 ORTHO05D000167 2.6e-08 62.8 138 29.7
Nitab4.5_0000692g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.4e-08 62.4 99 33.3
Nitab4.5_0001567g0130 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.4e-08 62.4 88 33.0
Nitab4.5_0000321g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.4e-08 62.0 109 29.4
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 4.4e-08 62.0 106 34.0
Nitab4.5_0001348g0150 Nicotiana tabacum HOM05D014464 ORTHO05D000022 5.8e-08 61.6 84 35.7
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 5.8e-08 61.6 117 31.6
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 7.5e-08 61.2 105 28.6
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 7.5e-08 61.2 122 31.1
Sopen02g028750 Solanum pennellii HOM05D000155 ORTHO05D000022 7.5e-08 61.2 105 28.6
Sopen08g020500 Solanum pennellii HOM05D000155 ORTHO05D000022 9.8e-08 60.8 122 31.1
Nitab4.5_0000188g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-07 60.5 104 32.7
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 1.3e-07 60.5 107 33.6
Sopen03g011360 Solanum pennellii HOM05D000155 ORTHO05D000022 1.7e-07 60.1 91 35.2
MBI01_g40633_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.2e-07 59.7 97 35.1
Nitab4.5_0000650g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.2e-07 59.7 112 29.5
VMungo1080G0380 Vigna mungo HOM05D000155 ORTHO05D000022 2.2e-07 59.7 123 30.1
Nitab4.5_0001181g0100 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.9e-07 59.3 93 35.5
Nitab4.5_0007262g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.9e-07 59.3 89 37.1
Peaxi162Scf00024g02013 Petunia axillaris HOM05D000155 ORTHO05D000022 2.9e-07 59.3 130 28.5
Nitab4.5_0002646g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.7e-07 58.9 96 34.4
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 3.7e-07 58.9 105 32.4
MBI04_g26264_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.9e-07 58.5 105 31.4
Peaxi162Scf01249g00027 Petunia axillaris HOM05D000155 ORTHO05D000022 4.9e-07 58.5 104 31.7
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 4.9e-07 58.5 93 32.3
CANSAT11G0329 Cannabis sativa HOM05D000003 ORTHO05D000004 6.4e-07 58.2 90 31.1
MBI16_g12290_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.4e-07 58.2 88 34.1
Nitab4.5_0000036g0160 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.4e-07 58.2 112 28.6
Peaxi162Scf01147g00005 Petunia axillaris HOM05D000155 ORTHO05D000022 6.4e-07 58.2 107 30.8
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 6.4e-07 58.2 105 26.7
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 6.4e-07 58.2 122 32.8
Aqoxy1G03921 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 8.3e-07 57.8 101 32.7
MBI13_g30485_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.3e-07 57.8 99 34.3
Nitab4.5_0000469g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-07 57.8 110 28.2
Nitab4.5_0000639g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-07 57.8 107 29.9
Nitab4.5_0000799g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-07 57.8 104 30.8
Nitab4.5_0004849g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-07 57.8 105 28.6
Sopen03g011810 Solanum pennellii HOM05D000004 ORTHO05D000034 8.3e-07 57.8 97 37.1
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 8.3e-07 57.8 136 27.2
A01p12730 Brassica napus HOM05D000155 ORTHO05D000022 1.1e-06 57.4 90 35.6
BraA01t01216Z Brassica rapa HOM05D000155 ORTHO05D000022 1.1e-06 57.4 90 35.6
Nitab4.5_0001027g0210 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-06 57.4 70 38.6
Peaxi162Scf00188g00934 Petunia axillaris HOM05D000155 ORTHO05D000022 1.1e-06 57.4 108 31.5
QL05p080949 Quercus lobata HOM05D000155 ORTHO05D000022 1.1e-06 57.4 101 32.7
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 1.1e-06 57.4 94 33.0
PGSC0003DMG400027758 Solanum tuberosum HOM05D001426 ORTHO05D001389 1.1e-06 57.4 106 29.2
Peaxi162Scf00108g00112 Petunia axillaris HOM05D000155 ORTHO05D000022 1.4e-06 57.0 85 37.6
PGSC0003DMG400014983 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.4e-06 57.0 79 34.2
BcaC09g51229 Brassica carinata HOM05D000155 ORTHO05D000022 1.9e-06 56.6 90 34.4
C01p15320 Brassica napus HOM05D000155 ORTHO05D000022 1.9e-06 56.6 90 34.4
BolC1t01486H Brassica oleracea HOM05D000155 ORTHO05D000022 1.9e-06 56.6 90 34.4
MBI04_g29847_MAGBIO Magnolia biondii HOM05D000413 ORTHO05D000292 1.9e-06 56.6 108 28.7
Nitab4.5_0000682g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.9e-06 56.6 106 29.2
Nitab4.5_0001141g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.9e-06 56.6 108 29.6
Nitab4.5_0003349g0070 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.9e-06 56.6 101 32.7
SEGI_19006 Sequoiadendron giganteum HOM05D000018 ORTHO05D000187 1.9e-06 56.6 97 34.0
MBI02_g08989_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.4e-06 56.2 89 32.6
Nitab4.5_0000213g0180 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-06 56.2 90 34.4
Nitab4.5_0000256g0270 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-06 56.2 89 30.3
PSO339G1836 Papaver somniferum HOM05D003407 ORTHO05D001026 2.4e-06 56.2 114 31.6
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 3.2e-06 55.8 105 30.5
MBI13_g20247_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.1e-06 55.5 86 36.0
Nitab4.5_0004015g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.1e-06 55.5 131 26.0
Peaxi162Scf00236g00081 Petunia axillaris HOM05D000155 ORTHO05D000022 4.1e-06 55.5 104 30.8
Sopen12g016250 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-06 55.5 91 33.0
TWI39G0070 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 4.1e-06 55.5 101 32.7
Nitab4.5_0000384g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.0e-06 54.7 90 33.3
Nitab4.5_0002286g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.0e-06 54.7 103 31.1
CANSAT21G2382 Cannabis sativa HOM05D000003 ORTHO05D000167 9.2e-06 54.3 94 27.7
AUR62027637 Chenopodium quinoa HOM05D003315 ORTHO05D010168 9.2e-06 54.3 102 28.4
Nitab4.5_0000769g0160 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.2e-06 54.3 111 28.8
Sabra11G0000200 Salix brachista HOM05D000155 ORTHO05D000022 9.2e-06 54.3 91 34.1


User provided reference genes

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