Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g005240 Solanum pennellii HOM05D015436 ORTHO05D018126 9.8e-147 523.5 270 100.0
Sopen01g005260 Solanum pennellii HOM05D015436 ORTHO05D018126 1.3e-93 347.1 277 71.8
Solyc01g009740.3 Solanum lycopersicum HOM05D015436 ORTHO05D018126 6.9e-92 341.3 634 40.2
Solyc01g009735.1 Solanum lycopersicum HOM05D015436 ORTHO05D018126 3.4e-30 136.3 137 54.7
Sopen01g005230 Solanum pennellii HOM05D015436 ORTHO05D018126 2.4e-28 130.2 184 47.3
Solyc01g011170.1 Solanum lycopersicum HOM05D015436 ORTHO05D018126 2.2e-21 107.1 135 47.4
CAN.G1179.3 Capsicum annuum HOM05D006285 ORTHO05D000105 5.4e-20 102.4 136 44.1
Solyc01g009730.3 Solanum lycopersicum HOM05D015436 ORTHO05D018126 6.8e-15 85.5 75 60.0
MSTRG.467 Avicennia marina HOM05D006285 ORTHO05D007249 4.9e-13 79.3 97 46.4
MSTRG.8043 Avicennia marina HOM05D006285 ORTHO05D007249 8.4e-13 78.6 95 45.3
Migut.K01038 Erythranthe guttata HOM05D006285 ORTHO05D007249 2.1e-11 73.9 99 46.5
Cfa009427 Carpinus fangiana HOM05D006285 ORTHO05D007249 2.7e-11 73.6 189 30.7
Peaxi162Scf00128g00175 Petunia axillaris HOM05D006285 ORTHO05D007249 2.7e-11 73.6 75 53.3
Potri.003G165000 Populus trichocarpa HOM05D006285 ORTHO05D007249 1.0e-10 71.6 90 44.4
Actinidia09609 Actinidia chinensis HOM05D006285 ORTHO05D007249 1.3e-10 71.2 98 40.8
Gohir.A03G151500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 1.3e-10 71.2 95 45.3
Dinv19860 Davidia involucrata HOM05D006285 ORTHO05D007249 1.7e-10 70.9 96 42.7
CiPaw.05G103600 Carya illinoinensis HOM05D006285 ORTHO05D007249 3.0e-10 70.1 79 49.4
Gohir.D02G174500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 3.0e-10 70.1 95 45.3
Gorai.005G196200 Gossypium raimondii HOM05D006285 ORTHO05D007249 3.0e-10 70.1 95 45.3
PGR102G0288 Punica granatum HOM05D006285 ORTHO05D007249 3.0e-10 70.1 80 47.5
Actinidia30601 Actinidia chinensis HOM05D006285 ORTHO05D007249 3.9e-10 69.7 73 50.7
Actinidia34008 Actinidia chinensis HOM05D006285 ORTHO05D007249 3.9e-10 69.7 98 38.8
CSS0034430 Camellia sinensis var. sinensis HOM05D006285 ORTHO05D007249 3.9e-10 69.7 98 38.8
Haze_12478 Corylus avellana HOM05D006285 ORTHO05D007249 3.9e-10 69.7 189 30.7
ClCG06G001800 Citrullus lanatus HOM05D006285 ORTHO05D007249 5.1e-10 69.3 93 45.2
Manes.09G186200 Manihot esculenta HOM05D006285 ORTHO05D007249 1.1e-09 68.2 89 43.8
CsaV3_6G007840 Cucumis sativus L. HOM05D006285 ORTHO05D007249 1.9e-09 67.4 93 44.1
Thecc.02G195800 Theobroma cacao HOM05D006285 ORTHO05D007249 1.9e-09 67.4 94 40.4
CANSAT01G0254 Cannabis sativa HOM05D006285 ORTHO05D007249 2.5e-09 67.0 96 40.6
Sed0027998 Sechium edule HOM05D006285 ORTHO05D007249 2.5e-09 67.0 95 44.2
PSO732G0051 Papaver somniferum HOM05D006285 ORTHO05D007249 5.6e-09 65.9 116 37.1
TAR374G0139 Trochodendron aralioides HOM05D006285 ORTHO05D007249 1.2e-08 64.7 94 40.4
CiPaw.06G107800 Carya illinoinensis HOM05D006285 ORTHO05D007249 1.6e-08 64.3 90 44.4
PSO675G2785 Papaver somniferum HOM05D006285 ORTHO05D007249 1.6e-08 64.3 120 35.8
QL03p050117 Quercus lobata HOM05D006285 ORTHO05D007249 2.1e-08 63.9 94 43.6
Carub.0006s1139 Capsella rubella HOM05D006285 ORTHO05D007249 2.8e-08 63.5 98 39.8
Oeu044502.1 Olea europaea HOM05D006285 ORTHO05D007249 2.8e-08 63.5 91 41.8
TWI18G1468 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 3.6e-08 63.2 113 36.3
BcaC04g19135 Brassica carinata HOM05D006285 ORTHO05D007249 6.2e-08 62.4 96 42.7
TAR622G0521 Trochodendron aralioides HOM05D006285 ORTHO05D007249 6.2e-08 62.4 105 38.1
Actinidia22128 Actinidia chinensis HOM05D006285 ORTHO05D007249 8.1e-08 62.0 142 35.2
HanXRQChr06g0175041 Helianthus annuus HOM05D006285 ORTHO05D007249 8.1e-08 62.0 122 33.6
AL6G23830 Arabidopsis lyrata HOM05D006285 ORTHO05D007249 1.1e-07 61.6 97 41.2
A10p24990 Brassica napus HOM05D006285 ORTHO05D007249 1.1e-07 61.6 96 41.7
BraA10t44561Z Brassica rapa HOM05D006285 ORTHO05D007249 1.1e-07 61.6 96 41.7
Duzib248G1203 Durio zibethinus HOM05D006285 ORTHO05D007249 1.4e-07 61.2 86 44.2
Rhsim12G0019500 Rhododendron simsii HOM05D006285 ORTHO05D007249 1.4e-07 61.2 75 48.0
C09p63860 Brassica napus HOM05D006285 ORTHO05D007249 1.8e-07 60.8 96 41.7
Ciclev10032858m.g Citrus clementina HOM05D006285 ORTHO05D007249 2.4e-07 60.5 90 46.7
GSVIVG01000967001 Vitis vinifera HOM05D006285 ORTHO05D007249 2.4e-07 60.5 89 42.7
BolC9t59226H Brassica oleracea HOM05D006285 ORTHO05D007249 3.1e-07 60.1 93 41.9
PGR057G0008 Punica granatum HOM05D006285 ORTHO05D007249 3.1e-07 60.1 98 40.8
PGR119G0305 Punica granatum HOM05D006285 ORTHO05D007249 3.1e-07 60.1 98 40.8
Sabra03G0120200 Salix brachista HOM05D006285 ORTHO05D007249 3.1e-07 60.1 109 35.8
ATR0582G164 Amborella trichopoda HOM05D006285 ORTHO05D007249 4.0e-07 59.7 129 32.6
A03p05870 Brassica napus HOM05D006285 ORTHO05D007249 4.0e-07 59.7 103 36.9
BraA03t09926Z Brassica rapa HOM05D006285 ORTHO05D007249 4.0e-07 59.7 103 36.9
BcaB01g05368 Brassica carinata HOM05D006285 ORTHO05D007249 5.2e-07 59.3 91 39.6
C03p06880 Brassica napus HOM05D006285 ORTHO05D007249 5.2e-07 59.3 103 36.9
BolC3t13190H Brassica oleracea HOM05D006285 ORTHO05D007249 5.2e-07 59.3 103 36.9
Eucgr.G01954 Eucalyptus grandis HOM05D006285 ORTHO05D007249 5.2e-07 59.3 89 39.3
C02p05990 Brassica napus HOM05D006285 ORTHO05D007249 8.9e-07 58.5 94 40.4
BolC2t06542H Brassica oleracea HOM05D006285 ORTHO05D007249 8.9e-07 58.5 94 40.4
CDE06G1494 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 8.9e-07 58.5 88 38.6
Aqoxy5G03206 Aquilegia oxysepala HOM05D006285 ORTHO05D007249 1.2e-06 58.2 84 40.5
Sp6g30770 Schrenkiella parvula HOM05D006285 ORTHO05D007249 1.2e-06 58.2 94 39.4
Eucgr.B03545 Eucalyptus grandis HOM05D006285 ORTHO05D007249 1.5e-06 57.8 101 36.6
FvH4_4g23000 Fragaria vesca HOM05D006285 ORTHO05D007249 1.5e-06 57.8 89 38.2
Duzib052G0121 Durio zibethinus HOM05D006285 ORTHO05D007249 2.0e-06 57.4 93 34.4
Thhalv10014724m.g Eutrema salsugineum HOM05D006285 ORTHO05D007249 2.6e-06 57.0 83 44.6
PGSC0003DMG400006480 Solanum tuberosum HOM05D006285 ORTHO05D007249 2.6e-06 57.0 75 41.3
AT5G13220 Arabidopsis thaliana HOM05D006285 ORTHO05D007249 3.4e-06 56.6 83 43.4
Solyc01g150113.1 Solanum lycopersicum HOM05D015436 ORTHO05D018126 4.4e-06 56.2 80 40.0
Gohir.D01G019500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 5.8e-06 55.8 96 37.5
Gorai.002G021800 Gossypium raimondii HOM05D006285 ORTHO05D007249 5.8e-06 55.8 96 37.5
HanXRQChr17g0540471 Helianthus annuus HOM05D006285 ORTHO05D007249 5.8e-06 55.8 92 38.0
Atru.chr11.2411 Acer truncatum HOM05D006285 ORTHO05D007249 7.6e-06 55.5 75 42.7
Prupe.1G218500 Prunus persica HOM05D006285 ORTHO05D007249 7.6e-06 55.5 89 38.2
THA.LOC104825472 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 7.6e-06 55.5 88 40.9
Psat2g175680 Pisum sativum HOM05D001047 ORTHO05D000768 9.9e-06 55.1 81 37.0


User provided reference genes

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