Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g013530 Solanum pennellii HOM05D005363 ORTHO05D006607 1.6e-45 186.0 117 100.0
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 2.0e-32 142.5 106 90.6
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 6.6e-31 137.5 108 89.8
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 1.2e-27 126.7 97 89.7
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 5.8e-27 124.4 93 90.3
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 1.6e-16 89.7 105 62.9
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 3.0e-15 85.5 105 62.9
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 1.5e-14 83.2 102 62.7
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 7.3e-14 80.9 106 66.0
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 7.3e-14 80.9 108 60.2
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 1.6e-13 79.7 96 62.5
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 1.6e-13 79.7 105 64.8
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 6.2e-13 77.8 102 64.7
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 1.1e-12 77.0 113 61.9
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 1.1e-12 77.0 104 62.5
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 1.8e-12 76.3 104 64.4
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 2.3e-12 75.9 108 63.0
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 2.3e-12 75.9 106 61.3
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 4.0e-12 75.1 99 58.6
Atru.chr2.2912 Acer truncatum HOM05D005363 ORTHO05D006607 6.8e-12 74.3 105 61.0
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 6.8e-12 74.3 95 67.4
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 1.5e-11 73.2 100 61.0
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 2.0e-11 72.8 87 66.7
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 2.0e-11 72.8 87 66.7
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 5.8e-11 71.2 106 56.6
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 9.9e-11 70.5 106 56.6
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.7e-10 69.7 82 68.3
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 4.9e-10 68.2 99 48.5
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 4.9e-10 68.2 106 55.7
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 8.3e-10 67.4 108 57.4
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 1.1e-09 67.0 91 65.9
Cc06_g05450 Coffea canephora HOM05D005363 ORTHO05D006607 1.9e-09 66.2 86 62.8
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 5.4e-09 64.7 102 58.8
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 5.4e-09 64.7 61 65.6
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 5.4e-09 64.7 100 58.0
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 7.1e-09 64.3 105 54.3
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 7.1e-09 64.3 93 64.5
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 7.1e-09 64.3 123 51.2
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 9.2e-09 63.9 104 56.7
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 1.2e-08 63.5 69 73.9
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 1.0e-07 60.5 105 55.2
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 6.6e-07 57.8 83 51.8
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 8.6e-07 57.4 87 56.3
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 1.1e-06 57.0 105 50.5
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 1.5e-06 56.6 60 55.0
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 3.3e-06 55.5 71 70.4
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 4.3e-06 55.1 117 42.7
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 7.3e-06 54.3 61 54.1
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 7.3e-06 54.3 103 53.4
THA.LOC104811844 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 7.3e-06 54.3 98 52.0
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 9.5e-06 53.9 94 56.4
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 9.5e-06 53.9 77 68.8
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 9.5e-06 53.9 94 48.9


User provided reference genes

Program Settings