Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 5.3e-145 517.7 265 100.0
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 2.5e-94 349.4 178 97.2
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 2.5e-94 349.4 178 97.2
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 3.0e-92 342.4 178 94.9
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 4.1e-89 332.0 178 91.6
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 4.1e-89 332.0 178 91.6
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 9.2e-89 330.9 192 87.5
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.6e-88 330.1 178 91.0
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 5.9e-88 328.2 178 91.0
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 1.7e-87 326.6 178 90.4
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 1.7e-87 326.6 178 91.0
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 2.3e-87 326.2 178 90.4
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 6.6e-87 324.7 178 90.4
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 1.1e-86 323.9 178 88.8
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 1.1e-86 323.9 178 88.8
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 1.1e-86 323.9 178 88.8
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 1.1e-86 323.9 178 88.8
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 1.5e-86 323.6 178 89.9
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 1.5e-86 323.6 178 89.9
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 7.3e-86 321.2 178 89.3
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 7.3e-86 321.2 178 89.3
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 7.3e-86 321.2 178 89.3
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 7.3e-86 321.2 178 90.4
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 7.3e-86 321.2 178 89.3
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 9.5e-86 320.9 178 88.8
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 4.7e-85 318.5 178 88.8
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 6.1e-85 318.2 177 89.8
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 8.0e-85 317.8 178 88.8
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 8.0e-85 317.8 178 88.8
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 6.8e-84 314.7 178 87.6
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 1.5e-83 313.5 193 83.4
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 1.5e-83 313.5 178 87.1
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 1.5e-83 313.5 178 87.1
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 1.5e-83 313.5 178 87.1
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 1.5e-83 313.5 178 87.1
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 1.5e-83 313.5 178 87.1
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 7.5e-83 311.2 178 86.5
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 1.3e-82 310.5 178 86.5
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 1.3e-82 310.5 177 85.3
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 1.3e-82 310.5 175 86.9
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 1.3e-82 310.5 178 86.5
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 1.1e-81 307.4 177 87.6
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 1.1e-81 307.4 177 87.6
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 4.1e-81 305.4 178 86.5
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 4.1e-81 305.4 167 89.8
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.0e-80 303.1 177 86.4
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 6.0e-80 301.6 178 84.8
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 1.0e-79 300.8 178 84.8
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 3.9e-79 298.9 178 82.0
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 6.6e-79 298.1 173 86.7
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 1.1e-76 290.8 178 83.1
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 1.4e-76 290.4 177 85.9
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 6.8e-76 288.1 178 81.5
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 6.8e-76 288.1 180 83.3
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 3.4e-75 285.8 186 80.1
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.9e-74 282.7 166 85.5
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 2.9e-74 282.7 178 82.0
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 6.0e-72 275.0 178 78.7
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.3e-71 273.1 179 81.0
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 2.8e-69 266.2 147 89.1
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 3.5e-64 249.2 158 81.6
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 1.0e-63 247.7 136 89.0
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 4.0e-60 235.7 134 86.6
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 4.3e-54 215.7 124 87.9
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 2.8e-53 213.0 114 87.7
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 4.8e-53 212.2 114 88.6
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 4.8e-53 212.2 178 64.0
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 3.4e-51 206.1 111 89.2
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 1.2e-48 197.6 107 94.4
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 2.3e-47 193.4 114 83.3
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 3.0e-47 193.0 178 59.6
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 1.8e-44 183.7 98 90.8
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 2.6e-43 179.9 113 82.3
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 3.8e-42 176.0 95 88.4
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 1.0e-39 167.9 98 83.7
Solyc00g052540.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 3.9e-39 166.0 89 98.9
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 8.7e-39 164.9 88 89.8
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 3.3e-38 162.9 95 81.1
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 3.7e-37 159.5 77 97.4
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 4.0e-36 156.0 75 97.3
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 2.9e-34 149.8 73 97.3
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 2.5e-33 146.7 72 94.4
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 7.1e-33 145.2 68 100.0
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 3.5e-32 142.9 113 67.3
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 8.7e-31 138.3 79 88.6
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 3.3e-30 136.3 154 46.1
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 3.3e-30 136.3 74 87.8
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 9.0e-28 128.3 69 87.0
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 7.6e-27 125.2 60 98.3
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.3e-26 124.4 69 88.4
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 2.2e-26 123.6 79 78.5
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 6.5e-26 122.1 81 77.8
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 1.4e-25 120.9 84 70.2
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 4.2e-25 119.4 79 79.7
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 3.0e-23 113.2 68 83.8
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 2.5e-22 110.2 65 81.5
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 2.1e-16 90.5 55 81.8
Nitab4.5_0000859g0090 Nicotiana tabacum HOM05D007194 ORTHO05D009182 7.9e-16 88.6 59 78.0
Gohir.A08G085962 Gossypium hirsutum HOM05D007194 ORTHO05D009182 1.0e-15 88.2 134 45.5
SHI24634 Sapria himalayana HOM05D007194 ORTHO05D009182 5.1e-15 85.9 132 43.2
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 2.2e-10 70.5 44 81.8
SHI49604 Sapria himalayana HOM05D007194 ORTHO05D009182 1.9e-09 67.4 37 89.2
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 3.2e-09 66.6 46 76.1
Dinv00475 Davidia involucrata HOM05D007194 ORTHO05D009182 4.7e-08 62.8 35 85.7
BraSC54t46378Z Brassica rapa HOM05D007194 ORTHO05D009182 6.1e-08 62.4 38 81.6


User provided reference genes

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