Gene: Nitab4.5_0003083g0040

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0003083g0040
  • Transcript Identifier Nitab4.5_0003083g0040.1
  • Gene Type Coding gene
  • Location Nitab4.5_0003083 : 285244-286211 : positive

Gene Family Information

  • ID HOM05D007194
  • #Genes/#Species 110/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0003083g0040.1

Descriptions

  • Description Nucleotide-binding, alpha-beta plait, Ribosomal protein L25/L23, Ribosomal protein L23/L25, conserved site, Cytochrome c-type biogenesis protein CcmC, Ribosomal protein L23/L15e core domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0015886
IEA
InterProheme transport
GO:0017004
IEA
InterProcytochrome complex assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0015232
IEA
InterProheme transmembrane transporter activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00840
GO:0020037
ISO
PLAZA Homology (enrichment)heme binding HOM05D007194

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0016020
IEA
InterPromembrane
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma ATCG00840
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00840
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope ATCG00840
GO:0000311
ISO
PLAZA Integrative Orthologyplastid large ribosomal subunit ATCG00840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012678 Ribosomal protein L23/L15e core domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR003557 Cytochrome c-type biogenesis protein CcmC
IPR013025 Ribosomal protein L25/L23
Mapman id Description
17.7.2.1.21 Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL23
2.4.4.2.1.3 Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).CcmABC complex.component CcmC