Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g002670 Solanum pennellii HOM05D009000 ORTHO05D010659 6.7e-168 594.0 308 100.0
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.1e-120 437.2 231 98.3
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 4.6e-108 395.2 217 94.5
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.1e-106 390.6 201 99.5
Solyc09g050050.2 Solanum lycopersicum HOM05D009000 ORTHO05D010659 2.6e-55 219.9 122 91.8
CAN.G1673.8 Capsicum annuum HOM05D009000 ORTHO05D010659 5.0e-46 189.1 294 46.3
CAN.G1159.2 Capsicum annuum HOM05D009000 ORTHO05D010659 5.2e-43 179.1 294 43.9
Glyma.15G187633 Glycine max HOM05D015862 ORTHO05D010659 1.4e-32 144.4 291 36.4
Glyma.15G187901 Glycine max HOM05D015862 ORTHO05D010659 9.2e-32 141.7 291 36.1
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 2.3e-30 137.1 287 35.9
CAN.G547.8 Capsicum annuum HOM05D009000 ORTHO05D010659 2.3e-27 127.1 180 50.0
Peaxi162Scf02507g00003 Petunia axillaris HOM05D015862 ORTHO05D010659 2.4e-24 117.1 102 62.7
Peaxi162Scf01967g00002 Petunia axillaris HOM05D015862 ORTHO05D010659 1.6e-23 114.4 153 47.7
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 5.2e-19 99.4 77 67.5
SalBow1G2933 Salvia bowleyana HOM05D009000 ORTHO05D010659 3.4e-18 96.7 143 42.0
Gorai.001G167200 Gossypium raimondii HOM05D009000 ORTHO05D010659 4.9e-17 92.8 123 43.1
Sopen01g027140 Solanum pennellii HOM05D000963 ORTHO05D011117 8.3e-17 92.0 50 92.0
LjContig00439g0013523 Lotus japonicus HOM05D009000 ORTHO05D010659 7.0e-16 89.0 126 39.7
LjContig00315g0010124 Lotus japonicus HOM05D009000 ORTHO05D010659 3.5e-15 86.7 128 40.6
HanXRQChr13g0388591 Helianthus annuus HOM05D009000 ORTHO05D010659 4.6e-15 86.3 155 36.1
Cc00_g01660 Coffea canephora HOM05D009000 ORTHO05D010659 5.1e-14 82.8 188 34.0
Nitab4.5_0014136g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 6.6e-14 82.4 141 36.9
Psat7g093400 Pisum sativum HOM05D000743 ORTHO05D000580 1.1e-13 81.6 142 33.8
Cc00_g01740 Coffea canephora HOM05D009000 ORTHO05D010659 1.9e-13 80.9 140 37.9
Lsat_1_v5_gn_5_17721 Lactuca sativa HOM05D009000 ORTHO05D010659 3.3e-13 80.1 124 35.5
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 3.3e-13 80.1 122 37.7
Sopen03g010810 Solanum pennellii HOM05D009000 ORTHO05D010659 4.3e-13 79.7 141 38.3
VMungo1309G3000 Vigna mungo HOM05D009000 ORTHO05D010659 5.6e-13 79.3 137 41.6
HanXRQMTg0579591 Helianthus annuus HOM05D009000 ORTHO05D010659 7.3e-13 79.0 113 38.1
Lsat_1_v5_gn_0_38060 Lactuca sativa HOM05D000743 ORTHO05D000580 7.3e-13 79.0 117 36.8
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.1e-12 77.4 117 41.0
unitig_87.g27977 Utricularia gibba HOM05D009000 ORTHO05D010659 2.8e-12 77.0 131 35.9
Psat7g138400 Pisum sativum HOM05D000743 ORTHO05D000580 1.4e-11 74.7 113 35.4
Solyc00g500102.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.3e-11 73.9 140 35.7
Solyc00g500119.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.3e-11 73.9 140 35.7
Solyc00g500276.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.3e-11 73.9 140 35.7
Solyc00g500360.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.3e-11 73.9 140 35.7
Sopen00g002740 Solanum pennellii HOM05D004291 ORTHO05D005620 2.3e-11 73.9 140 35.7
Nitab4.5_0001152g0700 Nicotiana tabacum HOM05D009000 ORTHO05D010659 4.0e-11 73.2 113 36.3
Sopen11g018250 Solanum pennellii HOM05D015862 ORTHO05D010659 5.2e-11 72.8 149 35.6
Manes.09G035001 Manihot esculenta HOM05D015862 ORTHO05D010659 6.8e-11 72.4 96 40.6
PSO384G3370 Papaver somniferum HOM05D004537 ORTHO05D005492 1.2e-10 71.6 130 36.2
Lsat_1_v5_gn_0_43360 Lactuca sativa HOM05D000743 ORTHO05D000580 2.0e-10 70.9 148 33.1
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 2.6e-10 70.5 118 38.1
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 2.6e-10 70.5 118 38.1
CAN.G76.4 Capsicum annuum HOM05D003467 ORTHO05D004220 2.6e-10 70.5 118 38.1
Ca_25385_v3 Cicer arietinum L. HOM05D008923 ORTHO05D013491 2.6e-10 70.5 141 31.9
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 5.8e-10 69.3 166 32.5
ECA039G0025 Erigeron canadensis HOM05D000743 ORTHO05D000580 8.3e-09 65.5 140 32.1
Nitab4.5_0000172g0650 Nicotiana tabacum HOM05D009000 ORTHO05D010659 1.4e-08 64.7 117 36.8
Phvul.011G124015 Phaseolus vulgaris HOM05D015862 ORTHO05D010659 4.1e-08 63.2 51 60.8
arahy.Tifrunner.gnm1.ann1.LV33NP Arachis hypogaea HOM05D009000 ORTHO05D010659 1.2e-07 61.6 137 37.2
unitig_87.g27989 Utricularia gibba HOM05D015862 ORTHO05D010659 7.8e-07 58.9 136 30.1
Glyma.05G092200 Glycine max HOM05D009000 ORTHO05D010659 1.0e-06 58.5 91 39.6
TPR.G35117 Trifolium pratense HOM05D009000 ORTHO05D010659 5.1e-06 56.2 137 34.3


User provided reference genes

Program Settings