Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g099780.2 Solanum lycopersicum HOM05D023424 ORTHO05D002431 6.0e-73 278.9 385 100.0
PGSC0003DMG400004715 Solanum tuberosum HOM05D023424 ORTHO05D002431 9.9e-60 235.0 387 66.1
Sopen12g034410 Solanum pennellii HOM05D023424 ORTHO05D002431 3.8e-59 233.0 369 92.7
Peaxi162Scf00272g00824 Petunia axillaris HOM05D023424 ORTHO05D002431 3.4e-36 156.8 94 81.9
CAN.G575.96 Capsicum annuum HOM05D023424 ORTHO05D002431 4.2e-26 123.2 68 89.7
Haze_23253 Corylus avellana HOM05D002917 ORTHO05D002431 1.7e-14 84.7 95 47.4
CiPaw.13G149300 Carya illinoinensis HOM05D002917 ORTHO05D002431 4.8e-14 83.2 89 52.8
Manes.02G136400 Manihot esculenta HOM05D002917 ORTHO05D002431 4.1e-13 80.1 92 47.8
Prupe.4G264200 Prunus persica HOM05D002917 ORTHO05D002431 4.1e-13 80.1 91 50.5
CANSAT54G1823 Cannabis sativa HOM05D002917 ORTHO05D002431 3.5e-12 77.0 88 47.7
GSVIVG01037326001 Vitis vinifera HOM05D002917 ORTHO05D002431 3.5e-12 77.0 91 45.1
MD03G1164700 Malus domestica HOM05D012161 ORTHO05D002431 1.0e-11 75.5 92 46.7
FAN21G0185 Fragaria x ananassa HOM05D002917 ORTHO05D002431 1.3e-11 75.1 91 46.2
Eucgr.J00684 Eucalyptus grandis HOM05D002917 ORTHO05D002431 2.2e-11 74.3 90 47.8
Ciclev10018107m.g Citrus clementina HOM05D002917 ORTHO05D002431 3.8e-11 73.6 91 49.5
PGR119G1093 Punica granatum HOM05D002917 ORTHO05D002431 3.8e-11 73.6 86 50.0
Duzib170G0372 Durio zibethinus HOM05D006044 ORTHO05D007653 8.5e-11 72.4 99 44.4
Potri.001G273300 Populus trichocarpa HOM05D002917 ORTHO05D002431 8.5e-11 72.4 86 47.7
Atru.chr3.2999 Acer truncatum HOM05D002917 ORTHO05D002431 1.9e-10 71.2 92 44.6
CAN.G468.5 Capsicum annuum HOM05D012161 ORTHO05D002431 1.9e-10 71.2 91 45.1
Carub.0006s1781 Capsella rubella HOM05D002917 ORTHO05D002431 4.2e-10 70.1 92 45.7
Potri.009G067600 Populus trichocarpa HOM05D002917 ORTHO05D002431 5.5e-10 69.7 86 45.3
QL01p016834 Quercus lobata HOM05D012161 ORTHO05D002431 7.2e-10 69.3 93 44.1
Sopen11g024730 Solanum pennellii HOM05D012161 ORTHO05D002431 1.6e-09 68.2 91 44.0
AT5G19473 Arabidopsis thaliana HOM05D002917 ORTHO05D002431 3.6e-09 67.0 91 45.1
Thecc.09G247400 Theobroma cacao HOM05D002917 ORTHO05D002431 4.7e-09 66.6 86 46.5
CSS0039673 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 1.0e-08 65.5 104 39.4
Nn7g36760 Nelumbo nucifera HOM05D002917 ORTHO05D002431 1.0e-08 65.5 94 40.4
Aqoxy1G00393 Aquilegia oxysepala HOM05D002917 ORTHO05D002431 1.4e-08 65.1 90 42.2
AL6G30970 Arabidopsis lyrata HOM05D002917 ORTHO05D002431 1.4e-08 65.1 95 42.1
Oeu032569.1 Olea europaea HOM05D002917 ORTHO05D002431 2.3e-08 64.3 86 46.5
Sabra16G0168400 Salix brachista HOM05D002917 ORTHO05D002431 6.8e-08 62.8 89 41.6
Rhsim13G0207800 Rhododendron simsii HOM05D002917 ORTHO05D002431 8.8e-08 62.4 91 44.0
Gohir.A09G110600 Gossypium hirsutum HOM05D009394 ORTHO05D002431 1.2e-07 62.0 85 41.2
Gohir.D09G107100 Gossypium hirsutum HOM05D009394 ORTHO05D002431 1.2e-07 62.0 85 41.2
Gorai.006G124700 Gossypium raimondii HOM05D009394 ORTHO05D002431 1.2e-07 62.0 85 41.2
Glyma.15G055400 Glycine max HOM05D009394 ORTHO05D002431 1.5e-07 61.6 109 36.7
Sc09g0001070 Simmondsia chinensis HOM05D009394 ORTHO05D002431 2.0e-07 61.2 109 37.6
Nitab4.5_0006764g0020 Nicotiana tabacum HOM05D012161 ORTHO05D002431 3.4e-07 60.5 91 44.0
Glyma.02G278700 Glycine max HOM05D009394 ORTHO05D002431 9.8e-07 58.9 96 37.5
MBI19_g20793_MAGBIO Magnolia biondii HOM05D002917 ORTHO05D002431 1.3e-06 58.5 91 39.6
Phvul.008G202100 Phaseolus vulgaris HOM05D009394 ORTHO05D002431 1.3e-06 58.5 88 36.4
Lalb_Chr04g0249281 Lupinus albus HOM05D009394 ORTHO05D002431 3.7e-06 57.0 93 37.6
Nitab4.5_0009266g0010 Nicotiana tabacum HOM05D012161 ORTHO05D002431 6.3e-06 56.2 75 46.7
Sopen04g006050 Solanum pennellii HOM05D002917 ORTHO05D002431 6.3e-06 56.2 95 38.9
THA.LOC104799140 Tarenaya hassleriana HOM05D012161 ORTHO05D002431 6.3e-06 56.2 101 36.6


User provided reference genes

Program Settings