Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 3.1e-212 741.5 368 100.0
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 3.5e-211 738.0 368 99.5
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 2.5e-201 705.3 368 95.4
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 8.6e-186 653.7 368 86.7
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 8.0e-176 620.5 368 83.4
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 4.1e-172 608.2 368 81.5
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.7e-170 602.8 373 79.6
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 3.9e-170 601.7 373 79.4
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 1.9e-169 599.4 373 79.1
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 1.1e-167 593.6 371 79.5
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 5.2e-167 591.3 371 78.4
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 2.0e-166 589.3 365 78.6
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 2.6e-166 589.0 370 78.1
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 3.4e-166 588.6 372 78.2
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 1.3e-165 586.6 373 78.3
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 1.7e-165 586.3 373 78.3
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 2.9e-165 585.5 370 77.6
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 3.7e-165 585.1 371 77.9
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 4.9e-165 584.7 384 76.8
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 6.4e-165 584.3 371 77.6
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 2.4e-164 582.4 350 82.3
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 2.4e-164 582.4 373 78.6
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 3.2e-164 582.0 371 76.8
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 3.2e-164 582.0 371 77.4
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.2e-163 580.1 371 78.2
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 1.6e-163 579.7 372 76.1
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 2.7e-163 578.9 368 77.4
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 2.7e-163 578.9 372 78.0
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 3.5e-163 578.6 371 77.6
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 6.0e-163 577.8 371 77.9
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 7.8e-163 577.4 372 76.1
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 3.0e-162 575.5 373 78.0
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 5.1e-162 574.7 371 77.1
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 5.1e-162 574.7 371 77.6
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 8.6e-162 573.9 371 76.5
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 8.6e-162 573.9 371 76.5
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 1.1e-161 573.5 371 77.1
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.1e-161 573.5 371 77.1
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.5e-161 573.2 369 75.1
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 1.9e-161 572.8 371 76.8
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 1.9e-161 572.8 371 77.1
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.9e-161 572.8 371 77.1
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 2.5e-161 572.4 371 78.4
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 2.5e-161 572.4 370 76.5
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 3.3e-161 572.0 371 75.7
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 4.3e-161 571.6 372 75.8
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 7.3e-161 570.9 371 77.1
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 7.3e-161 570.9 371 76.0
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 1.2e-160 570.1 398 72.6
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 1.6e-160 569.7 371 76.8
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 2.8e-160 568.9 371 76.0
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 3.6e-160 568.5 372 75.3
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 6.2e-160 567.8 371 76.3
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 8.1e-160 567.4 371 76.5
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.8e-159 566.2 375 75.5
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 3.1e-159 565.5 371 76.5
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 4.0e-159 565.1 371 75.7
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 5.2e-159 564.7 371 76.3
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 6.8e-159 564.3 366 76.8
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 8.9e-159 563.9 371 74.4
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 1.5e-158 563.1 384 74.0
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 3.4e-158 562.0 371 75.5
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 4.4e-158 561.6 372 74.7
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 4.4e-158 561.6 371 76.0
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 4.4e-158 561.6 371 75.2
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 4.4e-158 561.6 371 75.7
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 4.4e-158 561.6 371 75.2
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 5.8e-158 561.2 371 75.7
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 5.8e-158 561.2 371 75.7
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 5.8e-158 561.2 371 75.7
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 7.6e-158 560.8 378 74.9
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 7.6e-158 560.8 371 74.7
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 9.9e-158 560.5 370 75.4
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 9.9e-158 560.5 370 75.4
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 2.2e-157 559.3 371 75.5
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 3.8e-157 558.5 370 75.1
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 3.8e-157 558.5 371 74.9
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 4.9e-157 558.1 371 75.7
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 4.9e-157 558.1 371 73.9
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 8.4e-157 557.4 371 74.1
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 8.4e-157 557.4 360 77.5
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 1.4e-156 556.6 371 74.9
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 2.4e-156 555.8 372 74.2
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.4e-156 555.8 371 73.9
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.4e-156 555.8 371 73.9
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 9.2e-156 553.9 372 73.9
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.2e-155 553.5 352 78.1
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.2e-155 553.5 410 69.5
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.6e-155 553.1 359 75.2
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 1.6e-155 553.1 360 75.6
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 2.1e-155 552.7 370 74.1
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 2.1e-155 552.7 359 76.9
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 2.7e-155 552.4 352 78.1
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 4.6e-155 551.6 370 74.1
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 4.6e-155 551.6 369 74.5
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 6.0e-155 551.2 360 76.7
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 6.0e-155 551.2 371 72.2
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 1.0e-154 550.4 370 73.8
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 2.3e-154 549.3 359 74.7
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 2.3e-154 549.3 359 74.7
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 2.3e-154 549.3 359 74.7
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 2.3e-154 549.3 359 74.7
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 2.3e-154 549.3 359 74.7
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 3.0e-154 548.9 369 74.3
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 3.9e-154 548.5 371 74.4
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 1.1e-153 547.0 434 66.4
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 9.6e-153 543.9 351 78.1
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 9.6e-153 543.9 371 73.6
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 1.6e-152 543.1 371 73.6
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 2.8e-152 542.3 401 69.3
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 3.6e-152 542.0 369 71.8
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 3.6e-152 542.0 369 72.1
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 3.6e-152 542.0 360 75.0
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 6.2e-152 541.2 371 72.2
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 8.1e-152 540.8 371 73.6
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 1.4e-151 540.0 359 76.3
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 9.0e-151 537.3 371 72.8
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 1.2e-150 537.0 370 72.7
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 2.0e-150 536.2 357 74.8
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 5.8e-150 534.6 371 72.2
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 1.3e-149 533.5 357 73.7
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.3e-149 533.5 370 70.8
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.7e-149 533.1 371 73.3
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 3.8e-149 531.9 375 73.6
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 6.4e-149 531.2 360 73.1
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 2.1e-147 526.2 367 73.3
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 6.0e-147 524.6 361 71.7
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 6.0e-147 524.6 367 72.2
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 2.3e-146 522.7 366 69.4
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 6.6e-146 521.2 366 69.4
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 2.5e-145 519.2 352 74.4
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 2.1e-144 516.2 359 71.9
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.1e-143 513.8 372 69.9
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 7.6e-142 507.7 373 69.4
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.7e-141 506.5 364 68.1
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 1.4e-140 503.4 352 71.9
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 5.1e-138 495.0 371 64.2
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 9.6e-137 490.7 362 66.3
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.4e-135 486.9 370 64.1
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 2.4e-135 486.1 375 62.7
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 5.3e-135 485.0 371 64.4
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 9.0e-135 484.2 363 64.7
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 2.9e-133 479.2 371 63.1
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 3.8e-133 478.8 372 63.7
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 3.8e-133 478.8 398 64.3
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 1.1e-132 477.2 289 80.6
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.3e-130 470.3 367 64.0
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 1.6e-128 463.4 370 63.8
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 9.0e-127 457.6 284 78.2
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 5.8e-126 454.9 326 69.9
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 1.0e-125 454.1 357 63.9
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 3.3e-121 439.1 328 67.4
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 6.3e-120 434.9 276 76.4
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.1e-116 424.1 346 64.7
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 1.9e-116 423.3 385 55.8
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 7.2e-116 421.4 279 75.3
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.1e-115 419.9 281 74.0
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 3.6e-115 419.1 278 74.5
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 9.7e-113 411.0 367 55.0
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.2e-112 409.8 280 72.5
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 4.5e-110 402.1 240 80.8
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 9.4e-108 394.4 274 71.5
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 1.0e-106 391.0 402 50.0
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.1e-105 387.5 369 53.9
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 3.4e-102 375.9 273 66.7
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 3.8e-101 372.5 286 66.8
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 2.9e-85 319.7 201 78.1
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 2.9e-85 319.7 273 61.2
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 2.7e-83 313.2 197 75.6
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 1.3e-77 294.3 178 79.8
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.3e-74 283.5 198 73.2
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 7.5e-57 225.3 170 69.4
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 3.5e-54 216.5 266 49.6
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 4.0e-50 203.0 374 32.6
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 1.1e-42 178.3 440 28.0
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 4.9e-40 169.5 113 73.5
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 1.4e-39 167.9 396 27.8
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 3.2e-39 166.8 119 67.2
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 2.1e-38 164.1 138 61.6
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 7.8e-38 162.2 119 65.5
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 5.8e-33 146.0 113 63.7
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 2.9e-32 143.7 319 30.1
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 3.1e-18 97.1 84 60.7
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 1.1e-07 62.0 65 52.3
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 3.2e-07 60.5 49 63.3


User provided reference genes

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