Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 5.3e-72 274.2 139 100.0
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 5.3e-72 274.2 139 100.0
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 5.3e-72 274.2 139 100.0
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 2.7e-68 261.9 140 95.7
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 2.3e-67 258.8 144 92.4
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 5.7e-66 254.2 141 91.5
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 8.5e-62 240.4 138 84.1
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 1.9e-61 239.2 136 86.8
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 3.2e-61 238.4 136 86.8
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 5.5e-61 237.7 136 85.3
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 2.7e-60 235.3 136 84.6
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 6.1e-60 234.2 132 84.8
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 1.0e-59 233.4 132 84.8
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.0e-59 233.4 132 84.8
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.0e-59 233.4 132 84.8
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 1.0e-59 233.4 132 84.8
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.8e-59 232.6 136 83.1
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 1.8e-59 232.6 129 86.0
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 4.0e-59 231.5 136 83.1
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 5.2e-59 231.1 139 83.5
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 8.8e-59 230.3 136 82.4
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 1.2e-58 229.9 136 81.6
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 2.0e-58 229.2 139 82.0
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 2.0e-58 229.2 136 82.4
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 2.6e-58 228.8 132 82.6
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 2.6e-58 228.8 139 80.6
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.6e-58 228.8 136 80.1
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.6e-58 228.8 136 80.1
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.6e-58 228.8 136 80.1
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 2.6e-58 228.8 136 80.1
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 3.4e-58 228.4 133 85.0
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 3.4e-58 228.4 136 83.8
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 3.4e-58 228.4 137 82.5
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 3.4e-58 228.4 139 80.6
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 4.4e-58 228.0 136 80.9
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 4.4e-58 228.0 132 81.8
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 4.4e-58 228.0 136 81.6
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 5.7e-58 227.6 139 81.3
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 9.8e-58 226.9 129 85.3
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 9.8e-58 226.9 139 79.9
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 9.8e-58 226.9 138 80.4
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 1.3e-57 226.5 138 80.4
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 1.3e-57 226.5 136 80.9
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.2e-57 225.7 136 82.4
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 2.8e-57 225.3 137 83.2
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 3.7e-57 224.9 132 82.6
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 4.9e-57 224.6 137 81.0
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 4.9e-57 224.6 132 82.6
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 4.9e-57 224.6 140 78.6
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 4.9e-57 224.6 133 81.2
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 1.4e-56 223.0 133 79.7
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 2.4e-56 222.2 138 82.6
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 2.4e-56 222.2 138 82.6
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 3.1e-56 221.9 136 80.1
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 3.1e-56 221.9 136 80.1
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 3.1e-56 221.9 136 80.1
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 4.1e-56 221.5 141 78.0
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 7.0e-56 220.7 136 79.4
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 9.1e-56 220.3 136 79.4
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 9.1e-56 220.3 136 79.4
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 1.6e-55 219.5 136 78.7
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 1.6e-55 219.5 139 77.0
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 1.6e-55 219.5 139 77.0
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 1.6e-55 219.5 136 79.4
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 1.6e-55 219.5 140 80.7
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 2.0e-55 219.2 136 78.7
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 2.0e-55 219.2 136 78.7
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 2.7e-55 218.8 128 83.6
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 5.9e-55 217.6 159 70.4
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 7.7e-55 217.2 137 78.1
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 7.7e-55 217.2 138 76.8
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 7.7e-55 217.2 137 77.4
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 1.0e-54 216.9 127 83.5
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 1.7e-54 216.1 140 75.0
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 2.3e-54 215.7 134 78.4
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 2.9e-54 215.3 136 77.2
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 2.9e-54 215.3 136 76.5
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 2.9e-54 215.3 136 77.9
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 3.8e-54 214.9 140 75.0
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 3.8e-54 214.9 123 85.4
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 8.6e-54 213.8 136 77.9
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 8.6e-54 213.8 164 70.7
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 8.6e-54 213.8 123 84.6
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 1.5e-53 213.0 142 75.4
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 1.9e-53 212.6 123 82.9
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 2.5e-53 212.2 138 73.9
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 2.5e-53 212.2 136 74.3
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 7.2e-53 210.7 144 72.9
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 9.5e-53 210.3 133 78.2
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 1.2e-52 209.9 136 72.1
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 1.6e-52 209.5 147 72.1
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 3.6e-52 208.4 134 76.9
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 6.1e-52 207.6 138 70.3
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 6.8e-51 204.1 139 74.8
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 8.9e-51 203.8 132 76.5
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 1.2e-50 203.4 124 80.6
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 1.2e-50 203.4 124 80.6
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 2.6e-50 202.2 128 74.2
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 3.4e-50 201.8 131 74.0
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 1.7e-49 199.5 131 71.8
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 1.4e-48 196.4 136 72.8
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 1.2e-47 193.4 131 68.7
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 2.0e-47 192.6 124 72.6
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 4.6e-47 191.4 112 83.0
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 7.8e-47 190.7 111 83.8
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 1.5e-45 186.4 117 81.2
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 2.5e-45 185.7 109 83.5
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 2.5e-45 185.7 107 86.0
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.3e-45 185.3 109 83.5
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 4.3e-45 184.9 145 66.2
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 1.6e-44 183.0 109 82.6
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 2.1e-44 182.6 106 84.9
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 2.6e-42 175.6 125 70.4
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 1.7e-41 172.9 113 77.9
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 2.9e-41 172.2 130 69.2
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 1.4e-40 169.9 110 78.2
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 5.0e-38 161.4 106 71.7
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 8.6e-38 160.6 137 62.0
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 1.1e-37 160.2 132 63.6
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 9.5e-37 157.1 101 75.2
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 2.8e-36 155.6 115 63.5
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 1.8e-35 152.9 139 61.9
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 2.0e-34 149.4 85 87.1
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 5.8e-34 147.9 181 49.2
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 7.5e-34 147.5 84 86.9
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 2.3e-30 136.0 84 82.1
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 2.3e-30 136.0 84 81.0
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 1.1e-29 133.7 86 77.9
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 3.6e-28 128.6 84 77.4
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 2.3e-27 125.9 132 55.3
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 2.3e-27 125.9 120 57.5
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 6.8e-27 124.4 104 55.8
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 1.2e-26 123.6 71 81.7
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.3e-25 120.2 64 93.8
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 4.9e-25 118.2 98 63.3
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 6.4e-25 117.9 114 50.0
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 3.2e-24 115.5 108 57.4
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 1.7e-22 109.8 65 80.0
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 2.6e-18 95.9 122 39.3
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 7.6e-18 94.4 48 87.5
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 1.7e-17 93.2 52 80.8
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 4.9e-17 91.7 56 82.1
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 1.9e-16 89.7 60 76.7
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 4.2e-16 88.6 62 71.0
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 7.1e-16 87.8 54 70.4
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 2.1e-15 86.3 76 57.9
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 7.8e-15 84.3 125 40.0
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.0e-14 84.0 56 76.8
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 4.3e-13 78.6 45 75.6
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 6.9e-11 71.2 153 35.9
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 9.3e-08 60.8 120 33.3
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 4.6e-07 58.5 55 56.4
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 1.0e-06 57.4 56 57.1


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