Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g062930.3 Solanum lycopersicum HOM05D002493 ORTHO05D003175 3.0e-60 235.0 117 100.0
Solyc10g080930.2 Solanum lycopersicum HOM05D002493 ORTHO05D003175 4.7e-37 157.9 82 93.9
Sopen10g031440 Solanum pennellii HOM05D002493 ORTHO05D003175 1.4e-36 156.4 82 92.7
PGSC0003DMG400028192 Solanum tuberosum HOM05D002493 ORTHO05D003175 4.0e-36 154.8 82 91.5
Solyc03g044350.3 Solanum lycopersicum HOM05D002493 ORTHO05D003175 3.5e-32 141.7 74 93.2
CAN.G128.85 Capsicum annuum HOM05D002493 ORTHO05D003175 2.3e-31 139.0 82 81.7
Nitab4.5_0000062g0160 Nicotiana tabacum HOM05D002493 ORTHO05D003175 1.6e-29 132.9 82 79.3
Nitab4.5_0007477g0010 Nicotiana tabacum HOM05D002493 ORTHO05D003175 3.6e-29 131.7 82 78.0
Peaxi162Scf01487g00006 Petunia axillaris HOM05D002493 ORTHO05D003175 2.0e-27 125.9 84 73.8
Dinv21482 Davidia involucrata HOM05D002493 ORTHO05D003175 5.0e-23 111.3 82 68.3
Peaxi162Scf00003g05132 Petunia axillaris HOM05D002493 ORTHO05D003175 1.5e-22 109.8 82 68.3
Haze_20255 Corylus avellana HOM05D002493 ORTHO05D003175 1.9e-22 109.4 82 65.9
Cc00_g10950 Coffea canephora HOM05D002493 ORTHO05D003175 5.6e-22 107.8 81 65.4
Peaxi162Scf00003g05135 Petunia axillaris HOM05D002493 ORTHO05D003175 7.3e-22 107.5 80 68.8
Nitab4.5_0000812g0010 Nicotiana tabacum HOM05D002493 ORTHO05D003175 3.6e-21 105.1 67 76.1
Manes.08G061400 Manihot esculenta HOM05D002493 ORTHO05D003175 4.7e-21 104.8 81 64.2
Nitab4.5_0002869g0070 Nicotiana tabacum HOM05D002493 ORTHO05D003175 6.2e-21 104.4 67 74.6
Peaxi162Scf00003g05036 Petunia axillaris HOM05D002493 ORTHO05D003175 6.2e-21 104.4 80 67.5
Hma1.2p1_0254F.1_g103210 Hydrangea macrophylla HOM05D002493 ORTHO05D003175 1.4e-20 103.2 82 64.6
Potri.016G033300 Populus trichocarpa HOM05D002493 ORTHO05D003175 1.4e-20 103.2 82 64.6
TAR623G0194 Trochodendron aralioides HOM05D002493 ORTHO05D003175 1.8e-20 102.8 79 63.3
Cfa019980 Carpinus fangiana HOM05D002493 ORTHO05D003175 2.3e-20 102.4 76 65.8
GSVIVG01025776001 Vitis vinifera HOM05D002493 ORTHO05D003175 5.2e-20 101.3 82 61.0
TAR636G0768 Trochodendron aralioides HOM05D002493 ORTHO05D003175 8.9e-20 100.5 80 62.5
Actinidia05482 Actinidia chinensis HOM05D002493 ORTHO05D003175 1.2e-19 100.1 79 67.1
TWI74G0428 Tripterygium wilfordii HOM05D002493 ORTHO05D003175 1.2e-19 100.1 82 62.2
Duzib106G0075 Durio zibethinus HOM05D002493 ORTHO05D003175 2.6e-19 99.0 83 63.9
Lj2C403T6 Lonicera japonica HOM05D002493 ORTHO05D003175 2.6e-19 99.0 82 63.4
Lj1g0014460 Lotus japonicus HOM05D002493 ORTHO05D003175 2.6e-19 99.0 81 63.0
TWI77G0717 Tripterygium wilfordii HOM05D002493 ORTHO05D003175 2.6e-19 99.0 82 62.2
CSS0002579 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D003175 3.4e-19 98.6 80 62.5
CSS0008643 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D003175 4.4e-19 98.2 80 62.5
Glyma.02G157800 Glycine max HOM05D002493 ORTHO05D003175 4.4e-19 98.2 81 61.7
Manes.09G002800 Manihot esculenta HOM05D002493 ORTHO05D003175 7.5e-19 97.4 82 64.6
Ciclev10011717m.g Citrus clementina HOM05D002493 ORTHO05D003175 9.8e-19 97.1 80 62.5
Potri.006G035500 Populus trichocarpa HOM05D002493 ORTHO05D003175 1.3e-18 96.7 82 59.8
Atru.chr1.1386 Acer truncatum HOM05D002493 ORTHO05D003175 1.7e-18 96.3 81 61.7
Sabra16G0036400 Salix brachista HOM05D002493 ORTHO05D003175 1.7e-18 96.3 82 61.0
TAR633G1508 Trochodendron aralioides HOM05D002493 ORTHO05D003175 2.9e-18 95.5 74 66.2
COL.COLO4_08833 Corchorus olitorius HOM05D002493 ORTHO05D003175 3.7e-18 95.1 81 64.2
Sabra06G0023800 Salix brachista HOM05D002493 ORTHO05D003175 3.7e-18 95.1 78 62.8
Glyma.03G124700 Glycine max HOM05D002493 ORTHO05D003175 6.4e-18 94.4 80 60.0
Phvul.007G239100 Phaseolus vulgaris HOM05D002493 ORTHO05D003175 8.3e-18 94.0 82 58.5
Rhsim04G0114000 Rhododendron simsii HOM05D002493 ORTHO05D003175 8.3e-18 94.0 90 60.0
CANSAT64G2707 Cannabis sativa HOM05D002493 ORTHO05D003175 1.1e-17 93.6 81 59.3
TWI53G1609 Tripterygium wilfordii HOM05D002493 ORTHO05D003175 1.4e-17 93.2 80 61.2
CSS0019053 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D003175 1.9e-17 92.8 80 62.5
Lalb_Chr14g0365651 Lupinus albus HOM05D002493 ORTHO05D003175 1.9e-17 92.8 80 58.8
Lalb_Chr22g0357761 Lupinus albus HOM05D002493 ORTHO05D003175 1.9e-17 92.8 76 61.8
CiPaw.09G049700 Carya illinoinensis HOM05D002493 ORTHO05D003175 2.4e-17 92.4 81 60.5
Ca_08373_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 2.4e-17 92.4 73 67.1
Oeu024613.1 Olea europaea HOM05D002493 ORTHO05D003175 3.2e-17 92.0 79 63.3
Nn7g36909 Nelumbo nucifera HOM05D002493 ORTHO05D003175 4.1e-17 91.7 78 60.3
CsaV3_3G039870 Cucumis sativus L. HOM05D002493 ORTHO05D003175 7.0e-17 90.9 81 60.5
Lalb_Chr02g0156621 Lupinus albus HOM05D002493 ORTHO05D003175 7.0e-17 90.9 81 60.5
RcHm_v2.0_Chr2g0150411 Rosa chinensis HOM05D002493 ORTHO05D003175 7.0e-17 90.9 84 54.8
Sc19g0008100 Simmondsia chinensis HOM05D002493 ORTHO05D003175 7.0e-17 90.9 80 60.0
Thecc.05G121400 Theobroma cacao HOM05D002493 ORTHO05D003175 7.0e-17 90.9 91 56.0
Nn2g14656 Nelumbo nucifera HOM05D002493 ORTHO05D003175 9.2e-17 90.5 80 60.0
Actinidia38179 Actinidia chinensis HOM05D002493 ORTHO05D003175 1.2e-16 90.1 80 62.5
Duzib128G0587 Durio zibethinus HOM05D002493 ORTHO05D003175 1.6e-16 89.7 89 56.2
ClCG10G016470 Citrullus lanatus HOM05D002493 ORTHO05D003175 2.7e-16 89.0 82 61.0
Glyma.19G127800 Glycine max HOM05D002493 ORTHO05D003175 2.7e-16 89.0 80 58.8
MBI13_g36916_MAGBIO Magnolia biondii HOM05D002493 ORTHO05D003175 2.7e-16 89.0 80 56.2
Medtr7g089140 Medicago truncatula HOM05D002493 ORTHO05D003175 2.7e-16 89.0 76 63.2
arahy.Tifrunner.gnm1.ann1.ZA3CQ0 Arachis hypogaea HOM05D002493 ORTHO05D003175 4.6e-16 88.2 77 59.7
Lalb_Chr24g0400441 Lupinus albus HOM05D002493 ORTHO05D003175 7.8e-16 87.4 80 58.8
VMungo0720G0912 Vigna mungo HOM05D002493 ORTHO05D003175 7.8e-16 87.4 72 61.1
MSTRG.19785 Avicennia marina HOM05D002493 ORTHO05D003175 1.0e-15 87.0 79 60.8
Cpa.g.sc92.76 Carica papaya HOM05D002493 ORTHO05D003175 1.0e-15 87.0 78 60.3
CiPaw.10G042500 Carya illinoinensis HOM05D002493 ORTHO05D003175 1.0e-15 87.0 84 59.5
Hund19081 Selenicereus undatus HOM05D002493 ORTHO05D003175 1.3e-15 86.7 80 57.5
QL07p012378 Quercus lobata HOM05D002493 ORTHO05D003175 3.0e-15 85.5 81 58.0
MSTRG.6331 Avicennia marina HOM05D002493 ORTHO05D003175 6.6e-15 84.3 70 65.7
Phvul.001G120200 Phaseolus vulgaris HOM05D002493 ORTHO05D003175 6.6e-15 84.3 76 60.5
VMungo1383G2045 Vigna mungo HOM05D002493 ORTHO05D003175 6.6e-15 84.3 76 60.5
ECA248G1298 Erigeron canadensis HOM05D002493 ORTHO05D003175 8.6e-15 84.0 76 55.3
SGA_v2.0_scaffold106G30532 Striga asiatica HOM05D002493 ORTHO05D003175 8.6e-15 84.0 69 65.2
Migut.J01632 Erythranthe guttata HOM05D002493 ORTHO05D003175 1.1e-14 83.6 66 60.6
FAN09G4564 Fragaria x ananassa HOM05D002493 ORTHO05D003175 1.1e-14 83.6 84 52.4
Sed0019660 Sechium edule HOM05D002493 ORTHO05D003175 1.1e-14 83.6 81 56.8
Gorai.007G352000 Gossypium raimondii HOM05D002493 ORTHO05D003175 1.5e-14 83.2 80 62.5
Prupe.7G028700 Prunus persica HOM05D002493 ORTHO05D003175 1.5e-14 83.2 82 57.3
Sed0023770 Sechium edule HOM05D002493 ORTHO05D003175 1.9e-14 82.8 81 58.0
Gohir.A11G306400 Gossypium hirsutum HOM05D002493 ORTHO05D003175 3.3e-14 82.0 80 61.2
FvH4_6g37520 Fragaria vesca HOM05D002493 ORTHO05D003175 5.6e-14 81.3 84 51.2
FAN14G2978 Fragaria x ananassa HOM05D002493 ORTHO05D003175 5.6e-14 81.3 84 51.2
FAN02G2197 Fragaria x ananassa HOM05D002493 ORTHO05D003175 7.3e-14 80.9 84 51.2
Lsat_1_v5_gn_7_61900 Lactuca sativa HOM05D002493 ORTHO05D003175 9.5e-14 80.5 82 54.9
ECA247G1003 Erigeron canadensis HOM05D002493 ORTHO05D003175 2.1e-13 79.3 81 55.6
Gohir.D11G321900 Gossypium hirsutum HOM05D002493 ORTHO05D003175 4.7e-13 78.2 79 59.5
Ah.04g150770 Amaranthus hybridus HOM05D002493 ORTHO05D003175 6.2e-13 77.8 81 54.3
Ah.13g077170 Amaranthus hybridus HOM05D002493 ORTHO05D003175 8.1e-13 77.4 81 51.9
HanXRQChr10g0298511 Helianthus annuus HOM05D002493 ORTHO05D003175 1.1e-12 77.0 77 51.9
Psat3g080480 Pisum sativum HOM05D002493 ORTHO05D003175 1.1e-12 77.0 71 60.6
Dinv08254 Davidia involucrata HOM05D002493 ORTHO05D003175 1.4e-12 76.6 54 70.4
SGA_v2.0_scaffold69G23165 Striga asiatica HOM05D002493 ORTHO05D003175 1.4e-12 76.6 68 63.2
PGR042G0425 Punica granatum HOM05D002493 ORTHO05D003175 1.8e-12 76.3 76 56.6
AUR62030285 Chenopodium quinoa HOM05D002493 ORTHO05D003175 2.3e-12 75.9 85 50.6
Oeu027954.1 Olea europaea HOM05D002493 ORTHO05D003175 2.3e-12 75.9 83 53.0
Aqoxy1G00414 Aquilegia oxysepala HOM05D002493 ORTHO05D003175 3.1e-12 75.5 81 49.4
Sc13g0000980 Simmondsia chinensis HOM05D002493 ORTHO05D003175 3.1e-12 75.5 80 52.5
ATR0307G132 Amborella trichopoda HOM05D002493 ORTHO05D003175 5.2e-12 74.7 68 57.4
MELO3C009729.2 Cucumis melo HOM05D002493 ORTHO05D003175 5.2e-12 74.7 112 43.8
MD14G1088300 Malus domestica HOM05D002493 ORTHO05D003175 8.9e-12 73.9 60 65.0
THA.LOC104826877 Tarenaya hassleriana HOM05D002493 ORTHO05D003175 8.9e-12 73.9 80 53.8
HanXRQChr13g0406701 Helianthus annuus HOM05D002493 ORTHO05D003175 1.2e-11 73.6 82 50.0
CDE08G0887 Ceratophyllum demersum HOM05D002493 ORTHO05D003175 1.5e-11 73.2 68 57.4
THA.LOC104823166 Tarenaya hassleriana HOM05D002493 ORTHO05D003175 2.0e-11 72.8 71 54.9
CDE08G0106 Ceratophyllum demersum HOM05D002493 ORTHO05D003175 2.6e-11 72.4 80 51.2
EL10Ac3g07266 Beta vulgaris HOM05D002493 ORTHO05D003175 5.8e-11 71.2 77 53.2
Migut.K00147 Erythranthe guttata HOM05D002493 ORTHO05D003175 5.8e-11 71.2 73 53.4
HanXRQChr01g0007661 Helianthus annuus HOM05D002493 ORTHO05D003175 5.8e-11 71.2 77 51.9
DCAR_009127 Daucus carota HOM05D002493 ORTHO05D003175 1.3e-10 70.1 73 49.3
HPP92_025127 Vanilla planifolia HOM05D000001 ORTHO05D000003 1.3e-10 70.1 79 46.8
Eucgr.A02206 Eucalyptus grandis HOM05D002493 ORTHO05D003175 2.2e-10 69.3 94 43.6
SalBow1G7393 Salvia bowleyana HOM05D002493 ORTHO05D003175 2.9e-10 68.9 70 57.1
Oeu005221.1 Olea europaea HOM05D002493 ORTHO05D003175 3.7e-10 68.6 81 51.9
Aqoxy2G00506 Aquilegia oxysepala HOM05D002493 ORTHO05D003175 4.9e-10 68.2 73 49.3
Zm00001eb349390 Zea mays HOM05D002493 ORTHO05D003175 8.3e-10 67.4 51 60.8
SEGI_11259 Sequoiadendron giganteum HOM05D002493 ORTHO05D003175 1.1e-09 67.0 79 45.6
SEGI_20583 Sequoiadendron giganteum HOM05D002493 ORTHO05D003175 1.1e-09 67.0 52 57.7
PGSC0003DMG400035998 Solanum tuberosum HOM05D002493 ORTHO05D003175 1.1e-09 67.0 51 62.7
arahy.Tifrunner.gnm1.ann1.TK2Q97 Arachis hypogaea HOM05D002493 ORTHO05D003175 1.4e-09 66.6 104 46.2
MBI19_g07500_MAGBIO Magnolia biondii HOM05D002493 ORTHO05D003175 1.4e-09 66.6 96 46.9
Zm00001eb394260 Zea mays HOM05D002493 ORTHO05D003175 1.9e-09 66.2 72 48.6
HanXRQChr10g0293031 Helianthus annuus HOM05D002493 ORTHO05D003257 2.4e-09 65.9 77 51.9
Carub.0006s0407 Capsella rubella HOM05D002493 ORTHO05D003175 3.2e-09 65.5 74 48.6
CARHR208120 Cardamine hirsuta HOM05D002493 ORTHO05D003175 3.2e-09 65.5 74 48.6
DCAR_013651 Daucus carota HOM05D002493 ORTHO05D003175 3.2e-09 65.5 72 43.1
Thhalv10013510m.g Eutrema salsugineum HOM05D002493 ORTHO05D003175 3.2e-09 65.5 67 55.2
unitig_744.g24176 Utricularia gibba HOM05D002493 ORTHO05D003175 3.2e-09 65.5 86 43.0
arahy.Tifrunner.gnm1.ann1.SF5CY1 Arachis hypogaea HOM05D002493 ORTHO05D003175 5.4e-09 64.7 104 45.2
Solyc10g078350.2 Solanum lycopersicum HOM05D002493 ORTHO05D003175 1.2e-08 63.5 52 63.5
Sopen10g029010 Solanum pennellii HOM05D002493 ORTHO05D003175 1.2e-08 63.5 52 63.5
unitig_21.g20685 Utricularia gibba HOM05D002493 ORTHO05D003175 1.2e-08 63.5 69 50.7
AL6G14970 Arabidopsis lyrata HOM05D002493 ORTHO05D003175 1.6e-08 63.2 85 45.9
CiPaw.09G049600 Carya illinoinensis HOM05D002493 ORTHO05D003175 6.0e-08 61.2 63 50.8
AT5G05140 Arabidopsis thaliana HOM05D002493 ORTHO05D003175 1.0e-07 60.5 85 44.7
CAN.G960.68 Capsicum annuum HOM05D002493 ORTHO05D003175 1.7e-07 59.7 87 42.5
TPR.G16085 Trifolium pratense HOM05D002493 ORTHO05D003175 3.0e-07 58.9 76 44.7
arahy.Tifrunner.gnm1.ann1.4137UB Arachis hypogaea HOM05D002493 ORTHO05D003175 5.1e-07 58.2 77 45.5
C05p57310 Brassica napus HOM05D002493 ORTHO05D003175 8.6e-07 57.4 57 54.4
BolC5t34386H Brassica oleracea HOM05D002493 ORTHO05D003175 8.6e-07 57.4 57 54.4
Os07g0642600 Oryza sativa ssp. japonica HOM05D002493 ORTHO05D003175 1.1e-06 57.0 72 45.8
Sp3g09150 Schrenkiella parvula HOM05D002493 ORTHO05D003175 1.5e-06 56.6 61 52.5
BcaB01g05937 Brassica carinata HOM05D002493 ORTHO05D003175 1.9e-06 56.2 78 42.3
AT3G10820 Arabidopsis thaliana HOM05D002493 ORTHO05D003175 4.3e-06 55.1 57 50.9
A03p02180 Brassica napus HOM05D002493 ORTHO05D003175 4.3e-06 55.1 73 45.2
BraA03t09582Z Brassica rapa HOM05D002493 ORTHO05D003175 4.3e-06 55.1 73 45.2
Haze_20254 Corylus avellana HOM05D002493 ORTHO05D003175 4.3e-06 55.1 63 50.8
Sp6g37700 Schrenkiella parvula HOM05D002493 ORTHO05D003175 4.3e-06 55.1 76 43.4
AL3G22340 Arabidopsis lyrata HOM05D002493 ORTHO05D003175 9.5e-06 53.9 57 50.9


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