Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g049255.1 Solanum lycopersicum HOM05D001488 ORTHO05D024813 1.4e-128 463.0 234 100.0
PGSC0003DMG400011608 Solanum tuberosum HOM05D001488 ORTHO05D024813 2.1e-65 253.1 222 65.8
PGSC0003DMG400011607 Solanum tuberosum HOM05D001488 ORTHO05D024813 3.7e-65 252.3 173 82.7
Sopen12g023740 Solanum pennellii HOM05D001488 ORTHO05D024813 5.3e-64 248.4 224 64.7
CAN.G1387.5 Capsicum annuum HOM05D001488 ORTHO05D024813 1.9e-58 229.9 251 59.0
Sopen12g023690 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-57 227.3 241 61.4
CAN.G1387.3 Capsicum annuum HOM05D001488 ORTHO05D001456 6.9e-48 194.9 211 58.3
Nitab4.5_0003670g0010 Nicotiana tabacum HOM05D001488 ORTHO05D001456 5.2e-27 125.6 291 40.2
Peaxi162Scf00038g01811 Petunia axillaris HOM05D001488 ORTHO05D001456 8.3e-17 91.7 314 35.4
Nitab4.5_0002072g0060 Nicotiana tabacum HOM05D001488 ORTHO05D001456 5.9e-15 85.5 262 37.4
Duzib160G0588 Durio zibethinus HOM05D001488 ORTHO05D001456 6.5e-14 82.0 283 35.7
Nitab4.5_0002879g0080 Nicotiana tabacum HOM05D001488 ORTHO05D001456 1.1e-13 81.3 265 36.6
Duzib192G0094 Durio zibethinus HOM05D001488 ORTHO05D001456 1.5e-13 80.9 279 34.1
Thecc.06G118100 Theobroma cacao HOM05D001488 ORTHO05D001456 9.5e-13 78.2 278 34.2
GSVIVG01016780001 Vitis vinifera HOM05D001488 ORTHO05D001456 1.2e-12 77.8 171 40.4
Actinidia32178 Actinidia chinensis HOM05D001488 ORTHO05D001456 1.6e-12 77.4 286 31.8
CSS0004414 Camellia sinensis var. sinensis HOM05D001488 ORTHO05D001456 2.8e-12 76.6 282 34.0
Hma1.2p1_0291F.1_g115200 Hydrangea macrophylla HOM05D001488 ORTHO05D001456 2.8e-12 76.6 286 33.6
Ciclev10025682m.g Citrus clementina HOM05D001488 ORTHO05D001456 8.0e-12 75.1 278 31.3
Duzib235G0516 Durio zibethinus HOM05D001488 ORTHO05D001456 1.0e-11 74.7 279 34.4
PGSC0003DMG400002570 Solanum tuberosum HOM05D001488 ORTHO05D001456 1.4e-11 74.3 279 36.6
Oeu058721.1 Olea europaea HOM05D001488 ORTHO05D001456 1.8e-11 73.9 305 31.8
Oeu007567.1 Olea europaea HOM05D001488 ORTHO05D001456 5.2e-11 72.4 296 33.8
Atru.chr1.3909 Acer truncatum HOM05D001488 ORTHO05D001456 8.8e-11 71.6 273 33.0
Aqoxy7G01095 Aquilegia oxysepala HOM05D001488 ORTHO05D001456 8.8e-11 71.6 300 33.3
Lj5C38T14 Lonicera japonica HOM05D001488 ORTHO05D001456 1.5e-10 70.9 286 31.5
Aqoxy1G01010 Aquilegia oxysepala HOM05D001488 ORTHO05D001456 2.6e-10 70.1 300 33.3
Lsat_1_v5_gn_5_135800 Lactuca sativa HOM05D001488 ORTHO05D001456 5.7e-10 68.9 298 30.2
Cc04_g01440 Coffea canephora HOM05D001488 ORTHO05D001456 1.3e-09 67.8 272 33.5
Sabra03G0037000 Salix brachista HOM05D001488 ORTHO05D001456 2.2e-09 67.0 315 30.2
Potri.003G063400 Populus trichocarpa HOM05D001488 ORTHO05D001456 3.7e-09 66.2 130 43.8
CANSAT56G4431 Cannabis sativa HOM05D001488 ORTHO05D001456 4.9e-09 65.9 328 30.8
Dinv37875 Davidia involucrata HOM05D001488 ORTHO05D001456 4.9e-09 65.9 283 33.9
Solyc03g121970.1 Solanum lycopersicum HOM05D001488 ORTHO05D001456 4.9e-09 65.9 272 31.6
Dinv41833 Davidia involucrata HOM05D001488 ORTHO05D001456 8.3e-09 65.1 267 31.8
TAR626G0456 Trochodendron aralioides HOM05D001488 ORTHO05D001456 1.1e-08 64.7 278 30.6
Sopen03g040790 Solanum pennellii HOM05D001488 ORTHO05D001456 1.4e-08 64.3 270 31.1
ECA240G4202 Erigeron canadensis HOM05D001488 ORTHO05D001456 1.8e-08 63.9 243 31.7
FAN02G1354 Fragaria x ananassa HOM05D001488 ORTHO05D001456 1.8e-08 63.9 260 31.9
FAN14G3952 Fragaria x ananassa HOM05D001488 ORTHO05D001456 1.8e-08 63.9 260 31.9
Aqoxy4G01396 Aquilegia oxysepala HOM05D001488 ORTHO05D001456 2.4e-08 63.5 294 32.3
HanXRQChr16g0532421 Helianthus annuus HOM05D001488 ORTHO05D001456 2.4e-08 63.5 195 33.8
Manes.16G084100 Manihot esculenta HOM05D001488 ORTHO05D001456 4.1e-08 62.8 175 36.0
Potri.006G222700 Populus trichocarpa HOM05D001488 ORTHO05D001456 4.1e-08 62.8 144 43.1
Prupe.1G406300 Prunus persica HOM05D001488 ORTHO05D001456 4.1e-08 62.8 312 28.8
Manes.03G052400 Manihot esculenta HOM05D001488 ORTHO05D001456 5.4e-08 62.4 118 40.7
RcHm_v2.0_Chr2g0144811 Rosa chinensis HOM05D001488 ORTHO05D001456 5.4e-08 62.4 269 33.1
Sed0006913 Sechium edule HOM05D001488 ORTHO05D001456 5.4e-08 62.4 248 31.5
MD15G1052300 Malus domestica HOM05D001488 ORTHO05D001456 7.0e-08 62.0 310 29.0
Sabra06G0172100 Salix brachista HOM05D001488 ORTHO05D001456 7.0e-08 62.0 144 43.1
TAR383G0478 Trochodendron aralioides HOM05D001488 ORTHO05D001456 9.2e-08 61.6 284 33.5
CiPaw.01G220600 Carya illinoinensis HOM05D001488 ORTHO05D001456 1.2e-07 61.2 297 29.0
Dinv04028 Davidia involucrata HOM05D001488 ORTHO05D001456 1.6e-07 60.8 109 47.7
PGR044G1728 Punica granatum HOM05D001488 ORTHO05D001456 1.6e-07 60.8 134 38.8
Solyc07g041290.3 Solanum lycopersicum HOM05D001488 ORTHO05D001456 1.6e-07 60.8 168 35.7
A01p39640 Brassica napus HOM05D001488 ORTHO05D001456 2.0e-07 60.5 267 29.6
Lalb_Chr08g0244861 Lupinus albus HOM05D001488 ORTHO05D001456 2.0e-07 60.5 240 27.9
Sabra18G0046900 Salix brachista HOM05D001488 ORTHO05D001456 2.0e-07 60.5 132 41.7
CiPaw.15G090100 Carya illinoinensis HOM05D001488 ORTHO05D001456 2.7e-07 60.1 164 38.4
FAN05G4431 Fragaria x ananassa HOM05D001488 ORTHO05D001456 2.7e-07 60.1 256 33.2
FAN09G3059 Fragaria x ananassa HOM05D001488 ORTHO05D001456 2.7e-07 60.1 261 31.8
PSO063G4179 Papaver somniferum HOM05D001488 ORTHO05D001456 2.7e-07 60.1 277 31.4
Actinidia21787 Actinidia chinensis HOM05D001488 ORTHO05D001456 3.5e-07 59.7 266 30.5
BcaC08g43599 Brassica carinata HOM05D001488 ORTHO05D001456 3.5e-07 59.7 169 36.7
C06p09970 Brassica napus HOM05D001488 ORTHO05D001456 3.5e-07 59.7 169 36.7
BolC6t36070H Brassica oleracea HOM05D001488 ORTHO05D001456 3.5e-07 59.7 169 36.7
Cfa018007 Carpinus fangiana HOM05D001488 ORTHO05D001456 3.5e-07 59.7 110 42.7
CsaV3_4G035960 Cucumis sativus L. HOM05D001488 ORTHO05D001456 3.5e-07 59.7 290 30.3
Duzib150G1066 Durio zibethinus HOM05D001488 ORTHO05D001456 3.5e-07 59.7 317 28.1
VMungo0331G1191 Vigna mungo HOM05D001488 ORTHO05D001456 3.5e-07 59.7 296 31.4
Gohir.D10G054700 Gossypium hirsutum HOM05D001488 ORTHO05D001456 4.5e-07 59.3 128 42.2
Gorai.011G058200 Gossypium raimondii HOM05D001488 ORTHO05D001456 4.5e-07 59.3 128 42.2
Dinv10389 Davidia involucrata HOM05D001488 ORTHO05D001456 5.9e-07 58.9 235 29.4
Thhalv10022002m.g Eutrema salsugineum HOM05D001488 ORTHO05D001456 5.9e-07 58.9 249 30.1
Psat6g022320 Pisum sativum HOM05D001488 ORTHO05D001456 5.9e-07 58.9 251 29.9
Thecc.09G061200 Theobroma cacao HOM05D001488 ORTHO05D001456 5.9e-07 58.9 327 30.3
Haze_18123 Corylus avellana HOM05D001488 ORTHO05D001456 7.8e-07 58.5 109 38.5
HanXRQChr10g0312441 Helianthus annuus HOM05D001488 ORTHO05D001456 7.8e-07 58.5 291 29.2
Potri.001G170500 Populus trichocarpa HOM05D001488 ORTHO05D001456 7.8e-07 58.5 116 40.5
TPR.G16451 Trifolium pratense HOM05D001488 ORTHO05D001456 7.8e-07 58.5 274 31.4
vmacro15021 Vaccinium macrocarpon HOM05D001488 ORTHO05D001456 7.8e-07 58.5 106 43.4
Gohir.D05G139700 Gossypium hirsutum HOM05D001488 ORTHO05D001456 1.0e-06 58.2 271 31.0
Gorai.009G144000 Gossypium raimondii HOM05D001488 ORTHO05D001456 1.0e-06 58.2 271 31.0
MD17G1170300 Malus domestica HOM05D001488 ORTHO05D001456 1.0e-06 58.2 105 42.9
MELO3C016903.2 Cucumis melo HOM05D001488 ORTHO05D001456 1.3e-06 57.8 290 30.0
Duzib187G1885 Durio zibethinus HOM05D001488 ORTHO05D001456 1.3e-06 57.8 311 29.6
FvH4_6g34500 Fragaria vesca HOM05D001488 ORTHO05D001456 1.3e-06 57.8 262 30.9
Gohir.D05G041000 Gossypium hirsutum HOM05D001488 ORTHO05D001456 1.3e-06 57.8 317 28.1
Lj7C233T2 Lonicera japonica HOM05D001488 ORTHO05D001456 1.3e-06 57.8 302 31.8
Manes.04G143200 Manihot esculenta HOM05D001488 ORTHO05D001456 1.3e-06 57.8 129 43.4
Sabra01G0140700 Salix brachista HOM05D001488 ORTHO05D001456 1.3e-06 57.8 313 28.1
MSTRG.11640 Avicennia marina HOM05D001488 ORTHO05D001456 1.7e-06 57.4 275 28.7
Duzib168G1997 Durio zibethinus HOM05D001488 ORTHO05D001456 1.7e-06 57.4 316 29.7
MBI13_g11365_MAGBIO Magnolia biondii HOM05D001488 ORTHO05D001456 1.7e-06 57.4 161 37.9
Potri.018G049900 Populus trichocarpa HOM05D001488 ORTHO05D001456 1.7e-06 57.4 157 36.9
THA.LOC104822656 Tarenaya hassleriana HOM05D001488 ORTHO05D001456 1.7e-06 57.4 294 28.2
Actinidia25699 Actinidia chinensis HOM05D001488 ORTHO05D001456 2.3e-06 57.0 283 29.3
Gohir.A05G137600 Gossypium hirsutum HOM05D001488 ORTHO05D001456 2.3e-06 57.0 271 31.0
Gohir.A10G052900 Gossypium hirsutum HOM05D001488 ORTHO05D001456 2.3e-06 57.0 128 41.4
HanXRQChr04g0094821 Helianthus annuus HOM05D001488 ORTHO05D001456 2.3e-06 57.0 247 29.1
PGSC0003DMG400021740 Solanum tuberosum HOM05D001488 ORTHO05D001456 2.3e-06 57.0 206 29.6
Ca_15839_v3 Cicer arietinum L. HOM05D001488 ORTHO05D001456 2.9e-06 56.6 210 33.8
Aa31LG8G1180 Aethionema arabicum HOM05D001488 ORTHO05D001456 3.8e-06 56.2 251 28.7
BraA01t04005Z Brassica rapa HOM05D001488 ORTHO05D001456 5.0e-06 55.8 264 29.2
Gorai.009G041500 Gossypium raimondii HOM05D001488 ORTHO05D001456 5.0e-06 55.8 317 27.8
Lj5g0009631 Lotus japonicus HOM05D001488 ORTHO05D001456 5.0e-06 55.8 260 28.1
Lalb_Chr24g0393631 Lupinus albus HOM05D001488 ORTHO05D001456 5.0e-06 55.8 283 28.6
Psat4g183280 Pisum sativum HOM05D001488 ORTHO05D001456 5.0e-06 55.8 99 44.4
Prupe.3G043400 Prunus persica HOM05D001488 ORTHO05D001456 5.0e-06 55.8 103 41.7
unitig_748.g7466 Utricularia gibba HOM05D001488 ORTHO05D001456 6.6e-06 55.5 223 26.9
DCAR_026410 Daucus carota HOM05D001488 ORTHO05D001456 8.6e-06 55.1 261 31.8
Lsat_1_v5_gn_4_93600 Lactuca sativa HOM05D001488 ORTHO05D001456 8.6e-06 55.1 285 29.8
Rhsim08G0237500 Rhododendron simsii HOM05D001488 ORTHO05D001456 8.6e-06 55.1 291 28.9


User provided reference genes

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