Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g038523.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 5.2e-57 224.2 113 100.0
Sopen12g018840 Solanum pennellii HOM05D006809 ORTHO05D008609 8.5e-52 206.8 106 97.2
Nitab4.5_0001723g0010 Nicotiana tabacum HOM05D006809 ORTHO05D008609 1.7e-39 166.0 101 82.2
Nitab4.5_0001797g0090 Nicotiana tabacum HOM05D006809 ORTHO05D008609 1.7e-39 166.0 101 82.2
CAN.G131.10 Capsicum annuum HOM05D006809 ORTHO05D008609 1.1e-35 153.3 135 64.4
Haze_07749 Corylus avellana HOM05D006809 ORTHO05D008609 1.4e-33 146.4 103 73.8
Rhsim08G0143500 Rhododendron simsii HOM05D006809 ORTHO05D008609 1.4e-33 146.4 113 68.1
Cc11_g04700 Coffea canephora HOM05D006809 ORTHO05D008609 2.0e-32 142.5 108 72.2
Cpa.g.sc94.80 Carica papaya HOM05D006809 ORTHO05D008609 2.6e-32 142.1 102 73.5
Cfa019358 Carpinus fangiana HOM05D006809 ORTHO05D008609 3.4e-32 141.7 101 73.3
MSTRG.11330 Avicennia marina HOM05D006809 ORTHO05D008609 4.4e-32 141.4 104 70.2
Actinidia04809 Actinidia chinensis HOM05D006809 ORTHO05D008609 9.8e-32 140.2 103 70.9
Dinv22761 Davidia involucrata HOM05D006809 ORTHO05D008609 1.7e-31 139.4 100 75.0
vmacro17627 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 1.7e-31 139.4 109 67.9
QL10p020149 Quercus lobata HOM05D006809 ORTHO05D008609 2.2e-31 139.0 103 69.9
CiPaw.12G009200 Carya illinoinensis HOM05D006809 ORTHO05D008609 1.1e-30 136.7 101 70.3
Manes.14G087700 Manihot esculenta HOM05D006809 ORTHO05D008609 1.4e-30 136.3 100 72.0
SGA_v2.0_scaffold313G48281 Striga asiatica HOM05D006809 ORTHO05D008609 1.4e-30 136.3 113 64.6
TAR629G2676 Trochodendron aralioides HOM05D006809 ORTHO05D008609 1.4e-30 136.3 99 70.7
AUR62032115 Chenopodium quinoa HOM05D006809 ORTHO05D008609 1.8e-30 136.0 102 67.6
Nn4g23476 Nelumbo nucifera HOM05D006809 ORTHO05D008609 3.1e-30 135.2 100 70.0
vmacro16181 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 3.1e-30 135.2 105 67.6
Atru.chr9.503 Acer truncatum HOM05D006809 ORTHO05D008609 4.1e-30 134.8 103 70.9
SalBow5G3990 Salvia bowleyana HOM05D006809 ORTHO05D008609 4.1e-30 134.8 101 65.3
ECA246G1387 Erigeron canadensis HOM05D006809 ORTHO05D008609 5.4e-30 134.4 103 73.8
Aqoxy3G03648 Aquilegia oxysepala HOM05D006809 ORTHO05D008609 7.0e-30 134.0 100 70.0
CSS0043969 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 2.0e-29 132.5 110 66.4
HanXRQChr05g0154271 Helianthus annuus HOM05D006809 ORTHO05D008609 2.7e-29 132.1 103 68.9
Lsat_1_v5_gn_5_23620 Lactuca sativa HOM05D006809 ORTHO05D008609 1.7e-28 129.4 104 65.4
Thecc.03G104800 Theobroma cacao HOM05D006809 ORTHO05D008609 2.3e-28 129.0 99 67.7
TWI81G0697 Tripterygium wilfordii HOM05D006809 ORTHO05D008609 2.3e-28 129.0 99 65.7
AUR62039658 Chenopodium quinoa HOM05D006809 ORTHO05D008609 2.9e-28 128.6 100 65.0
Hma1.2p1_0060F.1_g032880 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 2.9e-28 128.6 99 68.7
Duzib205G0618 Durio zibethinus HOM05D006809 ORTHO05D008609 3.8e-28 128.3 99 66.7
Lj5A134T75 Lonicera japonica HOM05D006809 ORTHO05D008609 8.6e-28 127.1 95 69.5
arahy.Tifrunner.gnm1.ann1.23QZVI Arachis hypogaea HOM05D006809 ORTHO05D008609 1.1e-27 126.7 106 64.2
arahy.Tifrunner.gnm1.ann1.BJ4A4M Arachis hypogaea HOM05D006809 ORTHO05D008609 1.1e-27 126.7 106 64.2
COL.COLO4_24315 Corchorus olitorius HOM05D006809 ORTHO05D008609 3.3e-27 125.2 99 65.7
Gohir.A07G067300 Gossypium hirsutum HOM05D006809 ORTHO05D008609 4.3e-27 124.8 99 66.7
Gohir.D07G071900 Gossypium hirsutum HOM05D006809 ORTHO05D008609 5.6e-27 124.4 99 65.7
Gorai.001G076000 Gossypium raimondii HOM05D006809 ORTHO05D008609 5.6e-27 124.4 99 65.7
Ciclev10023968m.g Citrus clementina HOM05D006809 ORTHO05D008609 7.3e-27 124.0 112 66.1
PSO017G0895 Papaver somniferum HOM05D006809 ORTHO05D008609 7.3e-27 124.0 102 65.7
PSO478G2035 Papaver somniferum HOM05D006809 ORTHO05D008609 7.3e-27 124.0 102 65.7
CANSAT11G1370 Cannabis sativa HOM05D006809 ORTHO05D008609 3.6e-26 121.7 102 63.7
FAN08G0740 Fragaria x ananassa HOM05D006809 ORTHO05D008609 6.1e-26 120.9 99 64.6
Carub.0008s2163 Capsella rubella HOM05D006809 ORTHO05D008609 5.2e-25 117.9 101 58.4
AT5G60940 Arabidopsis thaliana HOM05D006809 ORTHO05D008609 6.8e-25 117.5 101 58.4
CARHR274620 Cardamine hirsuta HOM05D006809 ORTHO05D008609 6.8e-25 117.5 101 59.4
Sp2g24250 Schrenkiella parvula HOM05D006809 ORTHO05D008609 8.9e-25 117.1 101 59.4
Thhalv10004278m.g Eutrema salsugineum HOM05D006809 ORTHO05D008609 1.2e-24 116.7 99 59.6
RcHm_v2.0_Chr7g0183371 Rosa chinensis HOM05D006809 ORTHO05D008609 1.2e-24 116.7 99 62.6
Sc12g0007330 Simmondsia chinensis HOM05D006809 ORTHO05D008609 1.5e-24 116.3 100 62.0
DCAR_010163 Daucus carota HOM05D006809 ORTHO05D008609 2.0e-24 115.9 105 61.0
MD06G1203600 Malus domestica HOM05D006809 ORTHO05D008609 2.0e-24 115.9 99 63.6
FAN13G1268 Fragaria x ananassa HOM05D006809 ORTHO05D008609 2.6e-24 115.5 99 61.6
Ca_02916_v3 Cicer arietinum L. HOM05D006809 ORTHO05D008609 3.4e-24 115.2 100 61.0
ATR0827G115 Amborella trichopoda HOM05D006809 ORTHO05D008609 5.7e-24 114.4 103 57.3
GSVIVG01008127001 Vitis vinifera HOM05D006809 ORTHO05D008609 7.5e-24 114.0 101 59.4
Eucgr.K02539 Eucalyptus grandis HOM05D006809 ORTHO05D008609 1.7e-23 112.8 103 62.1
Aa31LG11G2360 Aethionema arabicum HOM05D006809 ORTHO05D008609 2.9e-23 112.1 100 57.0
AL8G37560 Arabidopsis lyrata HOM05D006809 ORTHO05D008609 2.9e-23 112.1 101 56.4
MELO3C002045.2 Cucumis melo HOM05D006809 ORTHO05D008609 3.7e-23 111.7 100 60.0
CsaV3_1G006160 Cucumis sativus L. HOM05D006809 ORTHO05D008609 1.8e-22 109.4 100 58.0
Peaxi162Scf01223g00014 Petunia axillaris HOM05D006809 ORTHO05D008609 4.1e-22 108.2 67 82.1
Glyma.06G205000 Glycine max HOM05D006809 ORTHO05D008609 7.0e-22 107.5 103 54.4
Lj1g0027663 Lotus japonicus HOM05D006809 ORTHO05D008609 1.2e-21 106.7 101 58.4
Medtr2g060520 Medicago truncatula HOM05D006809 ORTHO05D008609 1.2e-21 106.7 102 54.9
BcaC06g33207 Brassica carinata HOM05D006809 ORTHO05D008609 2.0e-21 105.9 110 53.6
Phvul.009G203000 Phaseolus vulgaris HOM05D006809 ORTHO05D008609 2.0e-21 105.9 101 56.4
Hund09945 Selenicereus undatus HOM05D006809 ORTHO05D008609 2.0e-21 105.9 78 66.7
BcaNung06908 Brassica carinata HOM05D006809 ORTHO05D008609 3.5e-21 105.1 101 54.5
PGR044G2265 Punica granatum HOM05D006809 ORTHO05D008609 3.5e-21 105.1 101 59.4
Lalb_Chr07g0189231 Lupinus albus HOM05D006809 ORTHO05D008609 5.9e-21 104.4 101 56.4
CDE10G1159 Ceratophyllum demersum HOM05D006809 ORTHO05D008609 1.7e-20 102.8 102 53.9
FAN18G0725 Fragaria x ananassa HOM05D006809 ORTHO05D008609 2.3e-20 102.4 98 58.2
C07p44720 Brassica napus HOM05D006809 ORTHO05D008609 5.0e-20 101.3 104 52.9
BolC7t44995H Brassica oleracea HOM05D006809 ORTHO05D008609 5.0e-20 101.3 104 52.9
MD14G1214700 Malus domestica HOM05D006809 ORTHO05D008609 5.0e-20 101.3 100 59.0
CSS0020904 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 1.6e-18 96.3 71 69.0
Medtr6g088180 Medicago truncatula HOM05D006809 ORTHO05D008609 8.0e-18 94.0 76 64.5
Oeu014424.1 Olea europaea HOM05D006809 ORTHO05D008609 1.8e-17 92.8 70 65.7
SMO358G0618 Selaginella moellendorffii HOM05D006809 ORTHO05D008609 4.0e-17 91.7 93 55.9
Pp3c18_4200 Physcomitrium patens HOM05D006809 ORTHO05D008609 8.9e-17 90.5 96 52.1
AagrBONN_evm.TU.Sc2ySwM_117.1929 Anthoceros agrestis HOM05D006809 ORTHO05D008609 1.7e-15 86.3 99 48.5
EL10Ac5g11165 Beta vulgaris HOM05D006809 ORTHO05D008609 3.7e-15 85.1 58 74.1
Mapoly0118s0024 Marchantia polymorpha HOM05D006809 ORTHO05D008609 4.9e-15 84.7 110 45.5
A03p46650 Brassica napus HOM05D006809 ORTHO05D008609 8.3e-15 84.0 98 48.0
BraA03t13789Z Brassica rapa HOM05D006809 ORTHO05D008609 1.4e-14 83.2 98 48.0
Psat1g128400 Pisum sativum HOM05D006809 ORTHO05D008609 1.9e-14 82.8 60 70.0
ClCG04G011640 Citrullus lanatus HOM05D006809 ORTHO05D000432 1.6e-13 79.7 100 48.0
Os03g0754900 Oryza sativa ssp. japonica HOM05D006809 ORTHO05D008609 1.6e-13 79.7 98 49.0
Sed0027469 Sechium edule HOM05D006809 ORTHO05D008609 3.0e-12 75.5 70 57.1
Zm00001eb057630 Zea mays HOM05D006809 ORTHO05D008609 1.5e-11 73.2 100 47.0
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 1.2e-10 70.1 62 58.1
Hma1.2p1_0060F.1_g032870 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 3.6e-10 68.6 103 42.7
Ah.11g047540 Amaranthus hybridus HOM05D006809 ORTHO05D008609 3.1e-09 65.5 71 50.7
VMungo1309G1606 Vigna mungo HOM05D006809 ORTHO05D008609 7.1e-06 54.3 59 45.8


User provided reference genes

Program Settings