Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g036430.3 Solanum lycopersicum HOM05D003014 ORTHO05D003233 8.8e-90 333.6 165 100.0
PGSC0003DMG400025780 Solanum tuberosum HOM05D003014 ORTHO05D003233 4.7e-51 204.9 128 81.2
PGSC0003DMG400025783 Solanum tuberosum HOM05D003014 ORTHO05D003233 4.4e-49 198.4 126 77.8
PGSC0003DMG400025781 Solanum tuberosum HOM05D003014 ORTHO05D003233 7.5e-49 197.6 128 78.1
Sopen01g050130 Solanum pennellii HOM05D003014 ORTHO05D003233 1.2e-46 190.3 126 76.2
Solyc01g107950.2 Solanum lycopersicum HOM05D003014 ORTHO05D003233 1.7e-45 186.4 126 75.4
PGSC0003DMG400045009 Solanum tuberosum HOM05D003014 ORTHO05D003233 2.1e-43 179.5 128 69.5
PGSC0003DMG400025782 Solanum tuberosum HOM05D003014 ORTHO05D003233 1.7e-40 169.9 131 67.2
Sopen12g016670 Solanum pennellii HOM05D003014 ORTHO05D003233 1.4e-39 166.8 110 75.5
Sopen09g010770 Solanum pennellii HOM05D003014 ORTHO05D003233 1.3e-37 160.2 128 60.9
Sopen01g009900 Solanum pennellii HOM05D003014 ORTHO05D003233 3.9e-37 158.7 128 61.7
Sopen01g050140 Solanum pennellii HOM05D000002 ORTHO05D003233 9.6e-36 154.1 131 63.4
Solyc01g057300.2 Solanum lycopersicum HOM05D003014 ORTHO05D003233 2.1e-35 152.9 131 61.1
Solyc01g014910.2 Solanum lycopersicum HOM05D003014 ORTHO05D003233 3.6e-35 152.1 128 58.6
Sopen01g010120 Solanum pennellii HOM05D003014 ORTHO05D003233 4.7e-35 151.8 128 57.0
Solyc01g107970.1 Solanum lycopersicum HOM05D003014 ORTHO05D003233 6.9e-34 147.9 131 61.1
Solyc01g107960.4 Solanum lycopersicum HOM05D003014 ORTHO05D003233 8.9e-34 147.5 131 60.3
Sopen09g010690 Solanum pennellii HOM05D003014 ORTHO05D003233 1.2e-33 147.1 128 59.4
Sopen01g021920 Solanum pennellii HOM05D003014 ORTHO05D003233 1.5e-33 146.7 131 60.3
Solyc09g018150.1 Solanum lycopersicum HOM05D003014 ORTHO05D003233 2.0e-33 146.4 128 57.0
Sopen01g050170 Solanum pennellii HOM05D003014 ORTHO05D003233 3.4e-33 145.6 126 62.7
Solyc09g018130.3 Solanum lycopersicum HOM05D003014 ORTHO05D003233 2.7e-30 136.0 128 56.2
Sopen01g050150 Solanum pennellii HOM05D003014 ORTHO05D003233 2.7e-30 136.0 131 58.8
CAN.G1041.44 Capsicum annuum HOM05D003014 ORTHO05D003233 2.7e-22 109.4 136 50.0
CAN.G1231.38 Capsicum annuum HOM05D003014 ORTHO05D003233 5.1e-21 105.1 136 48.5
CAN.G1041.46 Capsicum annuum HOM05D003014 ORTHO05D003233 2.1e-19 99.8 124 48.4
CAN.G1838.2 Capsicum annuum HOM05D003014 ORTHO05D003233 8.1e-19 97.8 136 46.3
CAN.G1838.1 Capsicum annuum HOM05D003014 ORTHO05D003233 1.1e-18 97.4 136 46.3
CAN.G1041.50 Capsicum annuum HOM05D003014 ORTHO05D003233 3.1e-18 95.9 131 45.0
Solyc01g014960.1 Solanum lycopersicum HOM05D003014 ORTHO05D003233 1.6e-14 83.6 98 42.9
Sopen01g010070 Solanum pennellii HOM05D003014 ORTHO05D003233 3.5e-14 82.4 60 65.0
Peaxi162Scf00152g00131 Petunia axillaris HOM05D003014 ORTHO05D003233 1.3e-13 80.5 128 43.0
Nitab4.5_0001230g0010 Nicotiana tabacum HOM05D003014 ORTHO05D003233 6.7e-13 78.2 128 41.4
Solyc01g020170.2 Solanum lycopersicum HOM05D003014 ORTHO05D003233 1.1e-12 77.4 65 61.5
Nitab4.5_0000292g0060 Nicotiana tabacum HOM05D003014 ORTHO05D003233 3.3e-12 75.9 130 39.2
PGSC0003DMG400014979 Solanum tuberosum HOM05D003014 ORTHO05D003233 2.8e-11 72.8 239 30.5
CSS0044289 Camellia sinensis var. sinensis HOM05D003014 ORTHO05D003233 1.8e-10 70.1 149 34.2
Dinv42167 Davidia involucrata HOM05D003014 ORTHO05D003233 2.4e-10 69.7 124 40.3
Lj9C357T7 Lonicera japonica HOM05D003014 ORTHO05D003233 1.5e-09 67.0 141 37.6
CSS0023387 Camellia sinensis var. sinensis HOM05D003014 ORTHO05D003233 2.0e-09 66.6 158 32.9
Nitab4.5_0001428g0060 Nicotiana tabacum HOM05D003014 ORTHO05D003233 2.0e-09 66.6 110 41.8
Sc08g0001710 Simmondsia chinensis HOM05D003014 ORTHO05D003233 2.0e-09 66.6 122 34.4
Lj9C355T10 Lonicera japonica HOM05D003014 ORTHO05D003233 2.6e-09 66.2 139 38.1
CiPaw.06G171700 Carya illinoinensis HOM05D003014 ORTHO05D003233 4.5e-09 65.5 137 35.8
TAR381G0350 Trochodendron aralioides HOM05D003014 ORTHO05D003233 5.8e-09 65.1 121 41.3
PGR042G3868 Punica granatum HOM05D003014 ORTHO05D003233 1.7e-08 63.5 134 35.1
Phvul.003G048000 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 2.2e-08 63.2 58 51.7
Nn1g04801 Nelumbo nucifera HOM05D003014 ORTHO05D003233 2.9e-08 62.8 129 38.8
Rhsim11G0164600 Rhododendron simsii HOM05D003014 ORTHO05D003233 3.8e-08 62.4 152 34.2
Dinv15730 Davidia involucrata HOM05D003014 ORTHO05D003233 4.9e-08 62.0 132 37.9
A06p03770 Brassica napus HOM05D003014 ORTHO05D003233 8.4e-08 61.2 89 41.6
BraA06t23582Z Brassica rapa HOM05D003014 ORTHO05D003233 8.4e-08 61.2 89 41.6
ATR0584G279 Amborella trichopoda HOM05D003014 ORTHO05D003233 1.1e-07 60.8 36 75.0
Gohir.A01G122633 Gossypium hirsutum HOM05D003014 ORTHO05D003233 1.1e-07 60.8 67 50.7
Gohir.A01G122666 Gossypium hirsutum HOM05D003014 ORTHO05D003233 1.1e-07 60.8 67 50.7
Gohir.D01G110400 Gossypium hirsutum HOM05D003014 ORTHO05D003233 1.4e-07 60.5 94 39.4
Gorai.002G135000 Gossypium raimondii HOM05D003014 ORTHO05D003233 1.4e-07 60.5 94 39.4
BcaB07g33661 Brassica carinata HOM05D003014 ORTHO05D003233 1.9e-07 60.1 66 53.0
QL11p034987 Quercus lobata HOM05D003014 ORTHO05D003233 1.9e-07 60.1 124 35.5
GSVIVG01009469001 Vitis vinifera HOM05D003014 ORTHO05D003233 1.9e-07 60.1 127 40.2
Glyma.02G103200 Glycine max HOM05D003014 ORTHO05D003233 3.2e-07 59.3 59 50.8
Hma1.2p1_0370F.1_g137650 Hydrangea macrophylla HOM05D003014 ORTHO05D003233 3.2e-07 59.3 132 35.6
PSO210G4688 Papaver somniferum HOM05D003014 ORTHO05D003233 3.2e-07 59.3 74 45.9
CSS0020374 Camellia sinensis var. sinensis HOM05D003014 ORTHO05D003233 4.2e-07 58.9 123 34.1
Cc02_g18940 Coffea canephora HOM05D003014 ORTHO05D003233 4.2e-07 58.9 154 32.5
Eucgr.G01493 Eucalyptus grandis HOM05D003014 ORTHO05D003233 4.2e-07 58.9 129 34.9
Lj4g0009952 Lotus japonicus HOM05D003014 ORTHO05D003233 4.2e-07 58.9 130 36.9
BcaC08g43150 Brassica carinata HOM05D003014 ORTHO05D003233 5.5e-07 58.5 89 41.6
C06p04340 Brassica napus HOM05D003014 ORTHO05D003233 5.5e-07 58.5 89 41.6
BolC6t35563H Brassica oleracea HOM05D003014 ORTHO05D003233 5.5e-07 58.5 89 41.6
Potri.014G025900 Populus trichocarpa HOM05D003014 ORTHO05D003233 5.5e-07 58.5 74 41.9
Ciclev10030106m.g Citrus clementina HOM05D003014 ORTHO05D003233 7.1e-07 58.2 83 43.4
TWI36G1467 Tripterygium wilfordii HOM05D003014 ORTHO05D003233 7.1e-07 58.2 61 49.2
Cpa.g.sc21.177 Carica papaya HOM05D003014 ORTHO05D003233 9.3e-07 57.8 115 35.7
Ca_18705_v3 Cicer arietinum L. HOM05D003014 ORTHO05D003233 9.3e-07 57.8 121 34.7
COL.COLO4_26545 Corchorus olitorius HOM05D003014 ORTHO05D003233 9.3e-07 57.8 104 36.5
Sabra14G0017800 Salix brachista HOM05D003014 ORTHO05D003233 9.3e-07 57.8 79 39.2
TPR.G12728 Trifolium pratense HOM05D003014 ORTHO05D003233 9.3e-07 57.8 99 42.4
Thhalv10012185m.g Eutrema salsugineum HOM05D003014 ORTHO05D003233 1.2e-06 57.4 84 40.5
PSO170G5216 Papaver somniferum HOM05D003014 ORTHO05D003233 1.2e-06 57.4 74 45.9
VMungo0251G3056 Vigna mungo HOM05D003014 ORTHO05D003233 1.2e-06 57.4 37 64.9
Cfa004537 Carpinus fangiana HOM05D003014 ORTHO05D003233 1.6e-06 57.0 56 51.8
CDE02G2363 Ceratophyllum demersum HOM05D003014 ORTHO05D003233 1.6e-06 57.0 70 42.9
Prupe.8G127700 Prunus persica HOM05D003014 ORTHO05D003233 1.6e-06 57.0 132 37.1
CANSAT25G0518 Cannabis sativa HOM05D003014 ORTHO05D003233 2.7e-06 56.2 35 68.6
Migut.N01183 Erythranthe guttata HOM05D003014 ORTHO05D003233 2.7e-06 56.2 61 44.3
Medtr4g085700 Medicago truncatula HOM05D003014 ORTHO05D003233 2.7e-06 56.2 126 32.5
Potri.001G305100 Populus trichocarpa HOM05D003014 ORTHO05D003233 2.7e-06 56.2 134 35.1
Sed0005157 Sechium edule HOM05D003014 ORTHO05D003233 2.7e-06 56.2 42 64.3
Thecc.08G003900 Theobroma cacao HOM05D003014 ORTHO05D003233 2.7e-06 56.2 93 40.9
TAR376G0856 Trochodendron aralioides HOM05D003014 ORTHO05D003233 2.7e-06 56.2 128 35.9
EL10Ac9g21584 Beta vulgaris HOM05D003014 ORTHO05D003233 3.5e-06 55.8 34 70.6
A05p20490 Brassica napus HOM05D003014 ORTHO05D003233 3.5e-06 55.8 113 35.4
MBI17_g08637_MAGBIO Magnolia biondii HOM05D003014 ORTHO05D003233 3.5e-06 55.8 88 42.0
Nitab4.5_0007431g0020 Nicotiana tabacum HOM05D003014 ORTHO05D003233 3.5e-06 55.8 119 37.0
Sed0010940 Sechium edule HOM05D003014 ORTHO05D003233 3.5e-06 55.8 65 44.6
SMO270G0033 Selaginella moellendorffii HOM05D003014 ORTHO05D003233 3.5e-06 55.8 34 64.7
Gohir.A03G188350 Gossypium hirsutum HOM05D003014 ORTHO05D003233 4.6e-06 55.5 60 48.3
Mapoly0126s0029 Marchantia polymorpha HOM05D003014 ORTHO05D003233 4.6e-06 55.5 35 71.4
Medtr4g085660 Medicago truncatula HOM05D003014 ORTHO05D003233 4.6e-06 55.5 124 39.5
TWI56G0629 Tripterygium wilfordii HOM05D003014 ORTHO05D003233 4.6e-06 55.5 67 43.3
Thecc.02G102900 Theobroma cacao HOM05D003014 ORTHO05D003233 6.0e-06 55.1 61 45.9
ClCG02G005950 Citrullus lanatus HOM05D003014 ORTHO05D003233 7.9e-06 54.7 71 43.7
COL.COLO4_32636 Corchorus olitorius HOM05D003014 ORTHO05D003233 7.9e-06 54.7 35 65.7
CsaV3_7G008580 Cucumis sativus L. HOM05D003014 ORTHO05D003233 7.9e-06 54.7 53 49.1


User provided reference genes

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