Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g035845.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 4.1e-28 127.5 70 100.0
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.3e-15 85.1 72 68.1
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.3e-15 85.1 72 68.1
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.3e-15 85.1 72 68.1
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.3e-15 85.1 72 68.1
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.3e-15 85.1 72 68.1
Hund15942 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.4e-12 75.1 84 53.6
Lsat_1_v5_gn_3_17360 Lactuca sativa HOM05D000216 ORTHO05D003638 6.5e-10 67.0 87 49.4
Solyc00g500335.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 1.1e-09 66.2 121 40.5
CAN.G386.26 Capsicum annuum HOM05D000216 ORTHO05D003638 1.9e-09 65.5 121 40.5
Phvul.003G256800 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 2.5e-09 65.1 121 39.7
Ah.10g027620 Amaranthus hybridus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Ah.10g027780 Amaranthus hybridus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Ah.10g028520 Amaranthus hybridus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
ATCG00150 Arabidopsis thaliana HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
BNapus_Darmor_BZH_scaffold_253p00040 Brassica napus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
BolSC37t60770H Brassica oleracea HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
BolSC45t60878H Brassica oleracea HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
BraSC151t45693Z Brassica rapa HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
BraSC59t46515Z Brassica rapa HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
CARHR281900 Cardamine hirsuta HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
DCAR_032472 Daucus carota HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
LjContig00318g0018562 Lotus japonicus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Medtr4g051103 Medicago truncatula HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
PSO548G0039 Papaver somniferum HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Psat0s2754g0240 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Psat0s2961g0080 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Psat0s3650g0160 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Psat1g003880 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Psat6g219400 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Psat7g033680 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
PGR111G0049 Punica granatum HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
RcHm_v2.0_CPg0502431 Rosa chinensis HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Sed0006587 Sechium edule HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Sed0012920 Sechium edule HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Sed0015108 Sechium edule HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.2e-09 64.7 121 39.7
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 3.2e-09 64.7 121 39.7
Ciclev10013984m.g Citrus clementina HOM05D000216 ORTHO05D003638 4.2e-09 64.3 121 38.8
SEGI_00749 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 4.2e-09 64.3 121 39.7
SEGI_01684 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 4.2e-09 64.3 121 38.8
AUR62012105 Chenopodium quinoa HOM05D000216 ORTHO05D003638 7.2e-09 63.5 121 38.8
Medtr3g029550 Medicago truncatula HOM05D000216 ORTHO05D003638 7.2e-09 63.5 121 39.7
Medtr7g116680 Medicago truncatula HOM05D000216 ORTHO05D003638 9.4e-09 63.2 88 47.7
Zm00001eb435250 Zea mays HOM05D000216 ORTHO05D003638 9.4e-09 63.2 121 38.8
Zm00001eb435460 Zea mays HOM05D000216 ORTHO05D003638 9.4e-09 63.2 121 38.8
Zm00001eb435730 Zea mays HOM05D000216 ORTHO05D003638 9.4e-09 63.2 121 38.8
Zm00001eb436810 Zea mays HOM05D000216 ORTHO05D003638 9.4e-09 63.2 121 38.8
Zm00001eb437240 Zea mays HOM05D000216 ORTHO05D003638 9.4e-09 63.2 121 38.8
Zm00001eb438330 Zea mays HOM05D000216 ORTHO05D003638 9.4e-09 63.2 121 38.8
Zm00001eb441010 Zea mays HOM05D000216 ORTHO05D003638 9.4e-09 63.2 121 38.8
Zm00001eb442740 Zea mays HOM05D000216 ORTHO05D003638 9.4e-09 63.2 121 38.8
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 1.2e-08 62.8 121 38.0
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 1.6e-08 62.4 121 38.8
HanXRQChr00c0165g0572141 Helianthus annuus HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
HanXRQChr08g0210201 Helianthus annuus HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
HanXRQChr10g0282501 Helianthus annuus HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
HanXRQChr11g0326631 Helianthus annuus HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
HanXRQChr13g0415501 Helianthus annuus HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
HanXRQCPg0579821 Helianthus annuus HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
Hma1.2p1_0414F.1_g147690 Hydrangea macrophylla HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
Lsat_1_v5_gn_2_1641 Lactuca sativa HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
Lj2C1238G11 Lonicera japonica HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 1.6e-08 62.4 121 38.8
LjContig00489g0001571 Lotus japonicus HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
Nitab4.5_0001015g0070 Nicotiana tabacum HOM05D000216 ORTHO05D003638 1.6e-08 62.4 52 67.3
SalBow1G2877 Salvia bowleyana HOM05D000216 ORTHO05D003638 1.6e-08 62.4 121 38.8
Potri.013G139080 Populus trichocarpa HOM05D000216 ORTHO05D003638 2.1e-08 62.0 121 38.0
unitig_91.g26494 Utricularia gibba HOM05D000216 ORTHO05D003638 2.1e-08 62.0 121 38.8
QL93p0837_0003 Quercus lobata HOM05D000216 ORTHO05D003638 2.7e-08 61.6 121 38.8
Mapoly0044s0072 Marchantia polymorpha HOM05D000216 ORTHO05D003638 3.6e-08 61.2 121 38.0
Oeu028759.1 Olea europaea HOM05D000216 ORTHO05D003638 6.1e-08 60.5 121 36.4
CAN.G201.5 Capsicum annuum HOM05D000216 ORTHO05D003638 8.0e-08 60.1 121 38.0
Lsat_1_v5_gn_8_19261 Lactuca sativa HOM05D000216 ORTHO05D003638 1.0e-07 59.7 121 38.0
SGA_v2.0_scaffold95G28823 Striga asiatica HOM05D000216 ORTHO05D003638 1.4e-07 59.3 121 38.0
Lalb_Chr07g0192171 Lupinus albus HOM05D000216 ORTHO05D003638 1.8e-07 58.9 118 39.0
Gorai.013G017800 Gossypium raimondii HOM05D000216 ORTHO05D003638 4.0e-07 57.8 126 36.5
HanXRQChr00c0601g0576511 Helianthus annuus HOM05D000216 ORTHO05D003638 1.2e-06 56.2 117 37.6
Nitab4.5_0001639g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 1.2e-06 56.2 47 66.0
CAN.G63.18 Capsicum annuum HOM05D000216 ORTHO05D003638 2.6e-06 55.1 40 75.0
Lalb_Chr06g0172971 Lupinus albus HOM05D000216 ORTHO05D003638 2.6e-06 55.1 55 60.0
Lalb_Chr09g0335341 Lupinus albus HOM05D000216 ORTHO05D003638 2.6e-06 55.1 55 60.0
Medtr0140s0070 Medicago truncatula HOM05D000216 ORTHO05D003638 2.6e-06 55.1 55 60.0
Medtr5g022790 Medicago truncatula HOM05D001076 ORTHO05D001603 2.6e-06 55.1 55 60.0
Psat7g038960 Pisum sativum HOM05D000216 ORTHO05D003638 2.6e-06 55.1 55 60.0
Hund20346 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.6e-06 55.1 121 34.7
CSS0018496 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003638 3.3e-06 54.7 116 37.9
Gorai.005G105500 Gossypium raimondii HOM05D000216 ORTHO05D003638 3.3e-06 54.7 55 58.2


User provided reference genes

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