Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g035815.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 4.4e-71 271.2 134 100.0
Sopen05g027070 Solanum pennellii HOM05D001987 ORTHO05D006514 2.9e-22 109.0 122 52.5
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.7e-19 99.8 131 48.9
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.5e-18 96.7 112 51.8
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.5e-18 96.7 112 51.8
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.5e-18 96.7 112 51.8
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.3e-18 94.4 129 47.3
Solyc09g015850.4 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.2e-17 93.6 112 50.9
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 2.1e-17 92.8 112 49.1
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 8.1e-17 90.9 110 45.5
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 8.1e-17 90.9 123 45.5
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 8.1e-17 90.9 123 45.5
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 8.1e-17 90.9 123 45.5
CAN.G1202.8 Capsicum annuum HOM05D001987 ORTHO05D006514 2.3e-16 89.4 61 73.8
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 5.2e-16 88.2 111 47.7
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 6.8e-16 87.8 112 48.2
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 1.2e-15 87.0 112 47.3
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 2.0e-15 86.3 112 47.3
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 2.0e-15 86.3 110 44.5
Nn1g10074 Nelumbo nucifera HOM05D001987 ORTHO05D006514 2.0e-15 86.3 112 47.3
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 2.6e-15 85.9 112 48.2
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 3.4e-15 85.5 102 48.0
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 3.4e-15 85.5 102 48.0
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 3.4e-15 85.5 102 48.0
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 3.4e-15 85.5 102 48.0
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 3.4e-15 85.5 102 50.0
Nitab4.5_0000309g0220 Nicotiana tabacum HOM05D001987 ORTHO05D006514 3.4e-15 85.5 72 62.5
MBI16_g09478_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 4.4e-15 85.1 110 47.3
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 7.6e-15 84.3 113 46.9
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 1.3e-14 83.6 97 45.4
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 3.7e-14 82.0 110 46.4
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 4.9e-14 81.6 99 49.5
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 4.9e-14 81.6 99 49.5
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 4.9e-14 81.6 99 49.5
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 4.9e-14 81.6 111 47.7
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 4.9e-14 81.6 111 47.7
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 1.4e-13 80.1 97 43.3
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 3.2e-13 79.0 111 44.1
ECA240G1514 Erigeron canadensis HOM05D001987 ORTHO05D006514 3.2e-13 79.0 99 48.5
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 3.2e-13 79.0 109 45.9
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 4.1e-13 78.6 109 45.9
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 5.4e-13 78.2 109 45.9
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 9.2e-13 77.4 112 44.6
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 1.6e-12 76.6 115 41.7
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 4.6e-12 75.1 62 62.9
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 6.0e-12 74.7 103 44.7
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 6.0e-12 74.7 103 44.7
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 1.3e-11 73.6 76 56.6
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 1.3e-11 73.6 99 46.5
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.3e-11 73.6 75 57.3
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 1.7e-11 73.2 64 59.4
Nitab4.5_0010565g0030 Nicotiana tabacum HOM05D000040 ORTHO05D000759 1.7e-11 73.2 81 50.6
MELO3C028575.2 Cucumis melo HOM05D001987 ORTHO05D006514 5.1e-11 71.6 75 56.0
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 3.3e-10 68.9 75 52.0
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.8e-09 65.9 63 57.1
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.8e-09 65.9 63 57.1
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.8e-09 65.9 63 57.1
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.8e-09 65.9 63 57.1
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.8e-09 65.9 63 57.1
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 3.6e-09 65.5 113 41.6
Nitab4.5_0009703g0120 Nicotiana tabacum HOM05D001987 ORTHO05D006514 3.1e-08 62.4 72 51.4
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 8.9e-08 60.8 99 41.4
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 1.2e-07 60.5 66 53.0
Peaxi162Scf00238g00149 Petunia axillaris HOM05D001987 ORTHO05D006514 2.6e-07 59.3 50 64.0
Peaxi162Scf00934g00143 Petunia axillaris HOM05D001987 ORTHO05D006514 1.7e-06 56.6 71 50.7
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 2.2e-06 56.2 75 45.3


User provided reference genes

Program Settings