Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g035730.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 3.3e-68 261.5 127 100.0
HanXRQChr00c0439g0574771 Helianthus annuus HOM05D000388 ORTHO05D000473 3.0e-13 79.0 89 48.3
Atru.chr13.1914 Acer truncatum HOM05D000388 ORTHO05D000473 7.4e-12 74.3 50 70.0
EL10Ac3g06536 Beta vulgaris HOM05D000388 ORTHO05D000473 9.7e-12 73.9 81 49.4
DCAR_032483 Daucus carota HOM05D000388 ORTHO05D000473 1.7e-11 73.2 81 48.1
ECA054G0002 Erigeron canadensis HOM05D000388 ORTHO05D000473 1.7e-11 73.2 81 48.1
ECA077G0005 Erigeron canadensis HOM05D000388 ORTHO05D000473 1.7e-11 73.2 81 48.1
HanXRQChr00c0300g0573271 Helianthus annuus HOM05D000388 ORTHO05D000473 1.7e-11 73.2 81 48.1
HanXRQChr00c0530g0575481 Helianthus annuus HOM05D000388 ORTHO05D000473 1.7e-11 73.2 81 48.1
HanXRQChr04g0099351 Helianthus annuus HOM05D000388 ORTHO05D000473 1.7e-11 73.2 81 48.1
HanXRQChr07g0201041 Helianthus annuus HOM05D000388 ORTHO05D000473 1.7e-11 73.2 81 48.1
HanXRQChr08g0210261 Helianthus annuus HOM05D000388 ORTHO05D000473 1.7e-11 73.2 81 48.1
HanXRQChr11g0326701 Helianthus annuus HOM05D000388 ORTHO05D000473 1.7e-11 73.2 81 48.1
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 1.7e-11 73.2 81 48.1
CAN.G142.9 Capsicum annuum HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
CAN.G338.31 Capsicum annuum HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
CAN.G500.82 Capsicum annuum HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
CAN.G679.6 Capsicum annuum HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
AUR62022175 Chenopodium quinoa HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
FAN04G2382 Fragaria x ananassa HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
LjContig00318g0012369 Lotus japonicus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Lalb_Chr01g0015091 Lupinus albus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Lalb_Chr23g0270521 Lupinus albus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Nn055s41927 Nelumbo nucifera HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Nn287s46144 Nelumbo nucifera HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Potri.013G142124 Populus trichocarpa HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
RcHm_v2.0_CPg0502261 Rosa chinensis HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
SabraPtG0002200 Salix brachista HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund17621 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund18040 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund24077 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund25933 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27450 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27606 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27658 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27668 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27701 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27746 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27761 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27803 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27842 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27869 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27914 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund27926 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28000 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28021 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28028 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28056 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28087 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28121 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28156 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28191 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28206 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28240 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28249 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28294 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28338 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28349 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28355 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28370 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28383 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28395 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28411 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28442 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28580 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28620 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28644 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28684 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28695 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28700 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28717 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28804 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund28916 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund29055 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund29409 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund29448 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund29626 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund29673 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund29778 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund29904 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund29946 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund30192 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Hund31184 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Solyc00g500056.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Solyc00g500138.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
Solyc00g500208.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 2.2e-11 72.8 81 48.1
EL10Ac1g02282 Beta vulgaris HOM05D000388 ORTHO05D000473 2.8e-11 72.4 81 48.1
EL10As12g24020 Beta vulgaris HOM05D000388 ORTHO05D000473 2.8e-11 72.4 81 48.1
EL10As15g24142 Beta vulgaris HOM05D000388 ORTHO05D000473 2.8e-11 72.4 81 48.1
Actinidia03563 Actinidia chinensis HOM05D000388 ORTHO05D000473 3.7e-11 72.0 39 82.1
AL2G20780 Arabidopsis lyrata HOM05D000388 ORTHO05D000473 3.7e-11 72.0 81 46.9
AL2G21370 Arabidopsis lyrata HOM05D000388 ORTHO05D000473 3.7e-11 72.0 81 46.9
ATCG00340 Arabidopsis thaliana HOM05D000388 ORTHO05D000473 3.7e-11 72.0 81 46.9
BcaC04g20705 Brassica carinata HOM05D000388 ORTHO05D000473 3.7e-11 72.0 81 46.9
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 3.7e-11 72.0 81 46.9
C09p40460 Brassica napus HOM05D000388 ORTHO05D000473 3.7e-11 72.0 81 46.9
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 3.7e-11 72.0 81 46.9
BraSC143t45686Z Brassica rapa HOM05D000388 ORTHO05D000473 3.7e-11 72.0 81 46.9
BraSC151t45698Z Brassica rapa HOM05D000388 ORTHO05D000473 3.7e-11 72.0 81 46.9
CARHR282000 Cardamine hirsuta HOM05D000388 ORTHO05D000473 3.7e-11 72.0 81 46.9
HanXRQChr02g0041701 Helianthus annuus HOM05D000388 ORTHO05D000473 3.7e-11 72.0 39 82.1
Hma1.2p1_0597F.1_g186505 Hydrangea macrophylla HOM05D000388 ORTHO05D000473 3.7e-11 72.0 39 82.1
SalBow1G5459 Salvia bowleyana HOM05D000388 ORTHO05D000473 3.7e-11 72.0 39 82.1
Hund28137 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.7e-11 72.0 39 82.1
Hund28282 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.7e-11 72.0 39 82.1
CAN.G219.23 Capsicum annuum HOM05D000388 ORTHO05D000473 4.8e-11 71.6 39 82.1
Lsat_1_v5_gn_1_110661 Lactuca sativa HOM05D000388 ORTHO05D000473 4.8e-11 71.6 81 46.9
Lsat_1_v5_gn_1_5820 Lactuca sativa HOM05D000388 ORTHO05D000473 4.8e-11 71.6 81 46.9
Lsat_1_v5_gn_1_88101 Lactuca sativa HOM05D000388 ORTHO05D000473 4.8e-11 71.6 81 46.9
Lsat_1_v5_gn_4_147760 Lactuca sativa HOM05D000388 ORTHO05D000473 4.8e-11 71.6 81 46.9
Lsat_1_v5_gn_5_152640 Lactuca sativa HOM05D000388 ORTHO05D000473 4.8e-11 71.6 81 46.9
Lj2C1238T1 Lonicera japonica HOM05D000388 ORTHO05D000473 4.8e-11 71.6 81 46.9
Lj2C1239G17 Lonicera japonica HOM05D000388 ORTHO05D000473 4.8e-11 71.6 81 46.9
arahy.Tifrunner.gnm1.ann1.QP1IPV Arachis hypogaea HOM05D000388 ORTHO05D000473 6.3e-11 71.2 39 82.1
arahy.Tifrunner.gnm1.ann1.R5AFBV Arachis hypogaea HOM05D000388 ORTHO05D000473 6.3e-11 71.2 39 82.1
arahy.Tifrunner.gnm1.ann1.UAEM0K Arachis hypogaea HOM05D000388 ORTHO05D000473 6.3e-11 71.2 39 82.1
Cfa021578 Carpinus fangiana HOM05D000388 ORTHO05D000473 6.3e-11 71.2 81 46.9
Gohir.D03G073920 Gossypium hirsutum HOM05D000388 ORTHO05D000473 6.3e-11 71.2 81 45.7
Nn3g17668 Nelumbo nucifera HOM05D000388 ORTHO05D000473 6.3e-11 71.2 81 46.9
QL93p0270_0013 Quercus lobata HOM05D000388 ORTHO05D000473 6.3e-11 71.2 81 46.9
QL93p2019_0006 Quercus lobata HOM05D000388 ORTHO05D000473 6.3e-11 71.2 81 46.9
Sc06g0004340 Simmondsia chinensis HOM05D000388 ORTHO05D000473 6.3e-11 71.2 81 46.9
MSTRG.10730 Avicennia marina HOM05D000388 ORTHO05D000473 8.2e-11 70.9 39 79.5
BNapus_Darmor_BZH_scaffold_253p00120 Brassica napus HOM05D000388 ORTHO05D000473 8.2e-11 70.9 39 79.5
BraSC151t45699Z Brassica rapa HOM05D000388 ORTHO05D000473 8.2e-11 70.9 39 79.5
CAN.G16.2 Capsicum annuum HOM05D000388 ORTHO05D000473 8.2e-11 70.9 39 82.1
Lj2A1239T200 Lonicera japonica HOM05D000388 ORTHO05D000473 8.2e-11 70.9 39 79.5
PSO548G0102 Papaver somniferum HOM05D000388 ORTHO05D000473 8.2e-11 70.9 81 46.9
Sed0022638 Sechium edule HOM05D000388 ORTHO05D000473 8.2e-11 70.9 81 45.7
Zm00001eb435440 Zea mays HOM05D000388 ORTHO05D000473 8.2e-11 70.9 81 46.9
Zm00001eb437220 Zea mays HOM05D000388 ORTHO05D000473 8.2e-11 70.9 81 46.9
Zm00001eb438340 Zea mays HOM05D000388 ORTHO05D000473 8.2e-11 70.9 81 46.9
Ah.10g027570 Amaranthus hybridus HOM05D000388 ORTHO05D000473 1.1e-10 70.5 81 45.7
Migut.J01360 Erythranthe guttata HOM05D000388 ORTHO05D000473 1.1e-10 70.5 81 46.9
Lsat_1_v5_gn_8_6001 Lactuca sativa HOM05D000388 ORTHO05D000473 1.1e-10 70.5 39 79.5
Medtr3g035600 Medicago truncatula HOM05D000388 ORTHO05D000473 1.1e-10 70.5 81 46.9
CAN.G1478.14 Capsicum annuum HOM05D000388 ORTHO05D000473 1.4e-10 70.1 39 79.5
CAN.G653.4 Capsicum annuum HOM05D000388 ORTHO05D000473 1.4e-10 70.1 39 79.5
AUR62002611 Chenopodium quinoa HOM05D000388 ORTHO05D000473 1.4e-10 70.1 39 79.5
PGR111G0099 Punica granatum HOM05D000388 ORTHO05D000473 1.4e-10 70.1 81 45.7
Sed0005497 Sechium edule HOM05D000388 ORTHO05D000473 1.8e-10 69.7 39 76.9
Sed0018502 Sechium edule HOM05D000388 ORTHO05D000473 1.8e-10 69.7 66 56.1
Medtr0002s0580 Medicago truncatula HOM05D000388 ORTHO05D000473 2.4e-10 69.3 81 45.7
SEGI_26602 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 3.1e-10 68.9 82 45.1
CAN.G1331.2 Capsicum annuum HOM05D000388 ORTHO05D000473 4.1e-10 68.6 39 76.9
SEGI_30674 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 4.1e-10 68.6 81 45.7
VMungo0918G0001 Vigna mungo HOM05D000388 ORTHO05D000473 5.3e-10 68.2 81 44.4
HanXRQChr02g0044801 Helianthus annuus HOM05D000388 ORTHO05D000473 6.9e-10 67.8 81 46.9
SEGI_03155 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 6.9e-10 67.8 81 44.4
SEGI_07669 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 6.9e-10 67.8 81 44.4
SEGI_12040 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 6.9e-10 67.8 81 44.4
SEGI_12770 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 6.9e-10 67.8 81 44.4
SEGI_23924 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 6.9e-10 67.8 81 44.4
SEGI_29931 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 6.9e-10 67.8 81 44.4
SEGI_31236 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 6.9e-10 67.8 81 44.4
SEGI_33863 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 6.9e-10 67.8 81 44.4
CDE08G0702 Ceratophyllum demersum HOM05D000388 ORTHO05D000473 9.1e-10 67.4 81 46.9
LjContig00489g0014085 Lotus japonicus HOM05D000388 ORTHO05D000473 9.1e-10 67.4 75 45.3
SGA_v2.0_scaffold781G53596 Striga asiatica HOM05D000388 ORTHO05D000473 1.5e-09 66.6 81 44.4
SEGI_03054 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.6e-09 65.9 39 74.4
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.6e-09 65.9 39 74.4
SEGI_27503 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.6e-09 65.9 81 43.2
unitig_87.g27946 Utricularia gibba HOM05D000388 ORTHO05D000473 2.6e-09 65.9 81 44.4
unitig_91.g26501 Utricularia gibba HOM05D000388 ORTHO05D000473 2.6e-09 65.9 81 44.4
arahy.Tifrunner.gnm1.ann1.X49995 Arachis hypogaea HOM05D000388 ORTHO05D000473 3.4e-09 65.5 38 78.9
CAN.G939.20 Capsicum annuum HOM05D000388 ORTHO05D000473 2.2e-08 62.8 39 71.8
Sopen12g014140 Solanum pennellii HOM05D000388 ORTHO05D000473 2.2e-08 62.8 37 75.7
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 5.0e-08 61.6 71 52.1
Migut.E00895 Erythranthe guttata HOM05D000388 ORTHO05D000473 1.9e-07 59.7 34 76.5
Hund04029 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.5e-07 59.3 40 65.0
Hund28498 Selenicereus undatus HOM05D000388 ORTHO05D000473 5.5e-07 58.2 66 47.0
Solyc09g059640.3 Solanum lycopersicum HOM05D000388 ORTHO05D000473 1.6e-06 56.6 31 80.6
HanXRQChr13g0413511 Helianthus annuus HOM05D000388 ORTHO05D000473 2.1e-06 56.2 30 83.3
Hund08564 Selenicereus undatus HOM05D000388 ORTHO05D000473 2.1e-06 56.2 30 83.3
Gohir.A02G107104 Gossypium hirsutum HOM05D000388 ORTHO05D000473 2.7e-06 55.8 65 44.6
Gohir.D13G125950 Gossypium hirsutum HOM05D000388 ORTHO05D000473 3.6e-06 55.5 66 43.9
SMO086G0054 Selaginella moellendorffii HOM05D000388 ORTHO05D000473 3.6e-06 55.5 81 37.0
SEGI_08951 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 3.6e-06 55.5 31 77.4
SEGI_13682 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 3.6e-06 55.5 31 77.4
Lj2C1237G32 Lonicera japonica HOM05D000388 ORTHO05D000473 4.7e-06 55.1 30 80.0
QL93p1000_0001 Quercus lobata HOM05D000388 ORTHO05D000473 6.1e-06 54.7 38 65.8
SEGI_09501 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 6.1e-06 54.7 31 77.4
SEGI_15439 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 7.9e-06 54.3 32 71.9


User provided reference genes

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