Gene: Solyc00g500056.1
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc00g500056.1
- Transcript Identifier Solyc00g500056.1.1
- Gene Type Coding gene
- Location SL4.0ch00 : 1496632-1498836 : negative
Gene Family Information
- ID HOM05D000388
- #Genes/#Species 1265/84
- Phylogenetic origin
- ID ORTHO05D000473
- #Genes/#Species 886/78
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc00g500056.1.1
- gene_id Solyc00g500056
Descriptions
- Description DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *-* A0A1U8QD90_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015979 | IEA | InterPro | photosynthesis | |
| GO:0009768 | ISO | PLAZA Integrative Orthology | photosynthesis, light harvesting in photosystem I | ATCG00340 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00340 |
| GO:0016168 | ISO | PLAZA Integrative Orthology | chlorophyll binding | ATCG00340 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009579 | IEA | InterPro | thylakoid | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0009522 | IEA | InterPro | photosystem I | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00340 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | ATCG00340 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | ATCG00340 |
| GO:0009538 | ISO | PLAZA Integrative Orthology | photosystem I reaction center | ATCG00340 |
| GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | ATCG00340 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | ATCG00340 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 1.1.4.2.2 | Photosynthesis.photophosphorylation.photosystem I.PS-I complex.apoprotein component PsaB |