Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g027705.1 Solanum lycopersicum HOM05D000758 ORTHO05D001216 2.3e-51 205.3 103 100.0
Solyc12g027690.1 Solanum lycopersicum HOM05D000758 ORTHO05D001216 2.4e-16 89.0 50 82.0
PGSC0003DMG400002138 Solanum tuberosum HOM05D000758 ORTHO05D001216 2.9e-14 82.0 91 51.6
Peaxi162Scf00122g00157 Petunia axillaris HOM05D000758 ORTHO05D001216 7.1e-13 77.4 76 59.2
Solyc06g005590.4 Solanum lycopersicum HOM05D000758 ORTHO05D001216 6.0e-12 74.3 91 48.4
Sopen06g001550 Solanum pennellii HOM05D000758 ORTHO05D001216 6.0e-12 74.3 91 48.4
Nitab4.5_0007132g0010 Nicotiana tabacum HOM05D000758 ORTHO05D001216 5.1e-11 71.2 44 77.3
Nitab4.5_0000272g0060 Nicotiana tabacum HOM05D000758 ORTHO05D001216 1.1e-10 70.1 45 75.6
Nitab4.5_0000463g0100 Nicotiana tabacum HOM05D000758 ORTHO05D001216 1.5e-10 69.7 44 75.0
Nitab4.5_0001326g0080 Nicotiana tabacum HOM05D000758 ORTHO05D001216 1.9e-10 69.3 44 75.0
Peaxi162Scf00774g00021 Petunia axillaris HOM05D000758 ORTHO05D001216 1.9e-10 69.3 44 75.0
Dinv17022 Davidia involucrata HOM05D000758 ORTHO05D001216 2.8e-09 65.5 43 67.4
Dinv42970 Davidia involucrata HOM05D000758 ORTHO05D001216 2.8e-09 65.5 43 67.4
Dinv43129 Davidia involucrata HOM05D000758 ORTHO05D001216 2.8e-09 65.5 43 67.4
Gohir.A05G094600 Gossypium hirsutum HOM05D000758 ORTHO05D001216 6.2e-09 64.3 89 46.1
TWI75G0926 Tripterygium wilfordii HOM05D000758 ORTHO05D001216 6.2e-09 64.3 85 42.4
Dinv00887 Davidia involucrata HOM05D000758 ORTHO05D001216 1.1e-08 63.5 43 65.1
Dinv04181 Davidia involucrata HOM05D000758 ORTHO05D001216 1.1e-08 63.5 43 65.1
Actinidia07024 Actinidia chinensis HOM05D000758 ORTHO05D001216 1.4e-08 63.2 38 73.7
Duzib150G1153 Durio zibethinus HOM05D000758 ORTHO05D001216 1.8e-08 62.8 87 42.5
PGSC0003DMG400030324 Solanum tuberosum HOM05D000758 ORTHO05D001216 2.4e-08 62.4 91 42.9
Solyc06g076270.3 Solanum lycopersicum HOM05D000758 ORTHO05D001216 3.1e-08 62.0 91 42.9
Sopen06g032700 Solanum pennellii HOM05D000758 ORTHO05D001216 3.1e-08 62.0 91 42.9
CAN.G394.65 Capsicum annuum HOM05D000758 ORTHO05D001216 4.0e-08 61.6 44 68.2
COL.COLO4_18531 Corchorus olitorius HOM05D000758 ORTHO05D001216 4.0e-08 61.6 89 41.6
Gohir.D05G095000 Gossypium hirsutum HOM05D000758 ORTHO05D001216 4.0e-08 61.6 89 43.8
Gorai.009G098300 Gossypium raimondii HOM05D000758 ORTHO05D001216 4.0e-08 61.6 89 43.8
QL01p031422 Quercus lobata HOM05D000758 ORTHO05D001216 5.3e-08 61.2 91 40.7
Cpa.g.sc81.127 Carica papaya HOM05D000758 ORTHO05D001216 6.9e-08 60.8 88 40.9
Duzib170G0081 Durio zibethinus HOM05D000758 ORTHO05D001216 6.9e-08 60.8 89 42.7
Nn2g11144 Nelumbo nucifera HOM05D000758 ORTHO05D001216 6.9e-08 60.8 41 65.9
CSS0004039 Camellia sinensis var. sinensis HOM05D000758 ORTHO05D001216 9.0e-08 60.5 85 38.8
Sed0021170 Sechium edule HOM05D000758 ORTHO05D001216 1.2e-07 60.1 80 40.0
CiPaw.14G067700 Carya illinoinensis HOM05D000758 ORTHO05D001216 1.5e-07 59.7 92 40.2
Hma1.2p1_0615F.1_g189855 Hydrangea macrophylla HOM05D000758 ORTHO05D001216 1.5e-07 59.7 43 62.8
Actinidia37193 Actinidia chinensis HOM05D000758 ORTHO05D001216 2.0e-07 59.3 38 71.1
Cfa011519 Carpinus fangiana HOM05D000758 ORTHO05D001216 2.0e-07 59.3 91 41.8
ClCG03G001390 Citrullus lanatus HOM05D000758 ORTHO05D001216 2.0e-07 59.3 88 38.6
Duzib168G0294 Durio zibethinus HOM05D000758 ORTHO05D001216 2.0e-07 59.3 89 41.6
Hma1.2p1_1420F.1_g282320 Hydrangea macrophylla HOM05D000758 ORTHO05D001216 2.0e-07 59.3 43 60.5
TWI79G0413 Tripterygium wilfordii HOM05D000758 ORTHO05D001216 2.0e-07 59.3 85 40.0
MBI14_g12119_MAGBIO Magnolia biondii HOM05D000758 ORTHO05D001216 2.6e-07 58.9 41 65.9
Nn2g13376 Nelumbo nucifera HOM05D000758 ORTHO05D001216 3.4e-07 58.5 41 63.4
TWI31G1035 Tripterygium wilfordii HOM05D000758 ORTHO05D001216 3.4e-07 58.5 87 40.2
EL10Ac7g16036 Beta vulgaris HOM05D000758 ORTHO05D001216 4.5e-07 58.2 91 38.5
CSS0010319 Camellia sinensis var. sinensis HOM05D000758 ORTHO05D001216 4.5e-07 58.2 41 63.4
CiPaw.13G092400 Carya illinoinensis HOM05D000758 ORTHO05D001216 4.5e-07 58.2 91 38.5
Cc01_g13040 Coffea canephora HOM05D000758 ORTHO05D001216 4.5e-07 58.2 86 37.2
Haze_24117 Corylus avellana HOM05D000758 ORTHO05D001216 4.5e-07 58.2 91 40.7
MELO3C020620.2 Cucumis melo HOM05D000758 ORTHO05D001216 4.5e-07 58.2 88 37.5
CsaV3_1G034410 Cucumis sativus L. HOM05D000758 ORTHO05D001216 4.5e-07 58.2 88 37.5
Thecc.09G319700 Theobroma cacao HOM05D000758 ORTHO05D001216 4.5e-07 58.2 85 43.5
Lj2A1065T24 Lonicera japonica HOM05D000758 ORTHO05D001216 5.8e-07 57.8 41 61.0
MBI05_g28378_MAGBIO Magnolia biondii HOM05D000758 ORTHO05D001216 5.8e-07 57.8 38 68.4
MD11G1099200 Malus domestica HOM05D000758 ORTHO05D001216 5.8e-07 57.8 42 64.3
Potri.001G241600 Populus trichocarpa HOM05D000758 ORTHO05D001216 5.8e-07 57.8 88 39.8
Sabra16G0146100 Salix brachista HOM05D000758 ORTHO05D001216 5.8e-07 57.8 87 40.2
GSVIVG01016524001 Vitis vinifera HOM05D000758 ORTHO05D001216 5.8e-07 57.8 88 43.2
Atru.chr3.3982 Acer truncatum HOM05D000758 ORTHO05D001216 7.6e-07 57.4 45 62.2
Atru.chr3.3985 Acer truncatum HOM05D000758 ORTHO05D001216 7.6e-07 57.4 45 62.2
arahy.Tifrunner.gnm1.ann1.18CGRH Arachis hypogaea HOM05D000758 ORTHO05D001216 7.6e-07 57.4 43 62.8
AUR62009557 Chenopodium quinoa HOM05D000758 ORTHO05D001216 7.6e-07 57.4 91 38.5
Os03g0274300 Oryza sativa ssp. japonica HOM05D000758 ORTHO05D001216 7.6e-07 57.4 41 70.7
TAR633G1047 Trochodendron aralioides HOM05D000758 ORTHO05D001216 7.6e-07 57.4 44 61.4
MD03G1089900 Malus domestica HOM05D000758 ORTHO05D001216 9.9e-07 57.0 38 68.4
arahy.Tifrunner.gnm1.ann1.53UM4C Arachis hypogaea HOM05D000758 ORTHO05D001216 1.3e-06 56.6 43 62.8
Ciclev10027927m.g Citrus clementina HOM05D000758 ORTHO05D001216 1.3e-06 56.6 85 38.8
Gohir.A03G043400 Gossypium hirsutum HOM05D000758 ORTHO05D001216 1.3e-06 56.6 89 39.3
Gohir.D03G124000 Gossypium hirsutum HOM05D000758 ORTHO05D001216 1.3e-06 56.6 89 39.3
Gorai.003G130700 Gossypium raimondii HOM05D000758 ORTHO05D001216 1.3e-06 56.6 89 39.3
Oeu017399.2 Olea europaea HOM05D000758 ORTHO05D001216 1.3e-06 56.6 41 61.0
Sed0025539 Sechium edule HOM05D000758 ORTHO05D001216 1.3e-06 56.6 80 38.8
Duzib114G0062 Durio zibethinus HOM05D000758 ORTHO05D001216 1.7e-06 56.2 88 37.5
AUR62001769 Chenopodium quinoa HOM05D000758 ORTHO05D001216 2.2e-06 55.8 91 37.4
Gohir.D06G171900 Gossypium hirsutum HOM05D000758 ORTHO05D001216 2.2e-06 55.8 88 38.6
Gorai.010G200900 Gossypium raimondii HOM05D000758 ORTHO05D001216 2.2e-06 55.8 88 38.6
Rhsim13G0081000 Rhododendron simsii HOM05D000758 ORTHO05D001216 2.2e-06 55.8 38 63.2
Rhsim13G0081300 Rhododendron simsii HOM05D000758 ORTHO05D001216 2.2e-06 55.8 38 63.2
PSO339G3709 Papaver somniferum HOM05D000758 ORTHO05D001216 2.9e-06 55.5 46 56.5
vmacro03059 Vaccinium macrocarpon HOM05D000758 ORTHO05D001216 2.9e-06 55.5 38 65.8
Sabra09G0022700 Salix brachista HOM05D000758 ORTHO05D001216 3.8e-06 55.1 40 62.5
Gohir.A10G220500 Gossypium hirsutum HOM05D000758 ORTHO05D001216 4.9e-06 54.7 88 36.4
PSO151G0094 Papaver somniferum HOM05D000758 ORTHO05D001216 4.9e-06 54.7 46 54.3
Rhsim03G0129400 Rhododendron simsii HOM05D000758 ORTHO05D001216 4.9e-06 54.7 41 56.1
Aqoxy2G02239 Aquilegia oxysepala HOM05D000758 ORTHO05D001216 6.4e-06 54.3 53 56.6
CSS0005261 Camellia sinensis var. sinensis HOM05D000758 ORTHO05D001216 6.4e-06 54.3 90 36.7
Phvul.L006443 Phaseolus vulgaris HOM05D000758 ORTHO05D001216 6.4e-06 54.3 84 38.1
Potri.010G202400 Populus trichocarpa HOM05D000758 ORTHO05D001216 6.4e-06 54.3 41 61.0
Rhsim06G0146200 Rhododendron simsii HOM05D000758 ORTHO05D001216 6.4e-06 54.3 88 39.8
Cpa.g.sc1.421 Carica papaya HOM05D000758 ORTHO05D001216 8.4e-06 53.9 51 51.0
CiPaw.01G288800 Carya illinoinensis HOM05D000758 ORTHO05D001216 8.4e-06 53.9 38 63.2
Gohir.A06G166400 Gossypium hirsutum HOM05D000758 ORTHO05D001216 8.4e-06 53.9 88 37.5
Gohir.D13G019200 Gossypium hirsutum HOM05D000758 ORTHO05D001216 8.4e-06 53.9 88 36.4


User provided reference genes

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