Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g017575.1 Solanum lycopersicum HOM05D000020 ORTHO05D023153 1.1e-78 296.6 147 100.0
Solyc03g025645.1 Solanum lycopersicum HOM05D000020 ORTHO05D000282 2.5e-67 258.8 135 91.9
Sopen03g032880 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-22 108.6 139 45.3
Sopen05g008960 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-21 107.1 139 44.6
Sopen08g019300 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-21 107.1 139 44.6
Sopen07g006040 Solanum pennellii HOM05D000002 ORTHO05D000047 3.5e-21 105.5 66 71.2
Sopen03g007120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-19 100.1 95 53.7
Sopen06g016520 Solanum pennellii HOM05D000002 ORTHO05D023153 5.5e-19 98.2 100 49.0
Solyc03g078625.1 Solanum lycopersicum HOM05D023041 ORTHO05D023153 2.8e-18 95.9 137 41.6
Sopen12g022010 Solanum pennellii HOM05D000002 ORTHO05D000001 4.5e-13 78.6 79 49.4
Sopen04g002540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-12 77.4 132 39.4
Sopen07g020730 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-12 75.9 132 37.1
Sopen05g020650 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-12 75.5 131 38.9
Sopen01g005510 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-12 75.1 142 34.5
Sopen00g012790 Solanum pennellii HOM05D000002 ORTHO05D000047 2.5e-11 72.8 117 35.9
Sopen02g015340 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-11 72.8 117 36.8
Sopen03g039280 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-11 72.8 129 37.2
Sopen04g033190 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-11 72.8 129 37.2
Sopen04g032600 Solanum pennellii HOM05D000002 ORTHO05D000001 4.3e-11 72.0 117 35.9
Sopen03g016180 Solanum pennellii HOM05D000006 ORTHO05D000001 5.6e-11 71.6 145 33.1
Sopen06g022730 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-11 71.2 129 35.7
CAN.G298.4 Capsicum annuum HOM05D000376 ORTHO05D000237 9.5e-11 70.9 56 60.7
Sopen07g025030 Solanum pennellii HOM05D000002 ORTHO05D000047 6.1e-10 68.2 136 33.8
Sopen10g025580 Solanum pennellii HOM05D000002 ORTHO05D018872 1.8e-09 66.6 120 35.8
Sopen01g031330 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-09 65.5 152 33.6
Solyc10g076565.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 8.9e-09 64.3 128 29.7
Sopen04g021680 Solanum pennellii HOM05D000002 ORTHO05D000047 8.9e-09 64.3 46 60.9
Sopen05g001290 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-08 63.5 113 31.9
Sopen10g021010 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-08 63.2 112 32.1
Sopen07g007590 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 126 30.2
CAN.G756.24 Capsicum annuum HOM05D002442 ORTHO05D002670 3.4e-08 62.4 94 38.3
Sopen02g013940 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 62.4 112 30.4
Sopen04g005980 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 62.4 40 67.5
Sopen06g034310 Solanum pennellii HOM05D000002 ORTHO05D000047 3.4e-08 62.4 40 67.5
Sopen07g025770 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-08 62.0 140 34.3
Sopen04g019820 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.6 111 30.6
Sopen05g023870 Solanum pennellii HOM05D000002 ORTHO05D000047 5.8e-08 61.6 101 36.6
Sopen01g043380 Solanum pennellii HOM05D000002 ORTHO05D000047 9.8e-08 60.8 48 56.2
Sopen04g006340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-07 60.5 137 33.6
Sopen06g015920 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-07 60.5 125 35.2
Sopen04g013350 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-07 60.1 58 53.4
Sopen07g006000 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-07 60.1 115 34.8
Sopen07g022320 Solanum pennellii HOM05D000309 ORTHO05D000271 1.7e-07 60.1 115 34.8
Sopen08g007840 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-07 60.1 115 34.8
Sopen08g029210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-07 60.1 115 34.8
Sopen09g024740 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 59.7 45 57.8
Sopen04g028260 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-07 59.3 43 60.5
Sopen08g016650 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-07 59.3 67 41.8
Sopen08g021260 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-07 59.3 43 60.5
Sopen09g008000 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-07 58.9 137 34.3
Sopen04g028520 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.5 46 56.5
Sopen06g008220 Solanum pennellii HOM05D000002 ORTHO05D000047 4.9e-07 58.5 67 43.3
Sopen07g024030 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.5 128 32.8
Sopen01g023210 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-07 58.2 112 29.5
Sopen06g031040 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-07 58.2 138 30.4
Sopen09g007300 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-07 58.2 162 27.8
Sopen10g018810 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-07 58.2 67 43.3
Sopen01g027760 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-07 57.8 46 52.2
Sopen02g015230 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-07 57.8 46 56.5
Sopen06g011710 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-07 57.8 46 56.5
Sopen09g029790 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-07 57.8 139 27.3
Sopen10g016770 Solanum pennellii HOM05D000004 ORTHO05D000002 8.3e-07 57.8 67 43.3
Sopen01g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 61 47.5
Sopen08g001660 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 128 32.0
Sopen03g007400 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 57.0 43 58.1
Sopen05g009280 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 57.0 44 47.7
Sopen06g016800 Solanum pennellii HOM05D000002 ORTHO05D000047 1.9e-06 56.6 81 35.8
Sopen12g022120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-06 56.6 102 31.4
Sopen01g008270 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 57 42.1
Sopen03g004080 Solanum pennellii HOM05D000048 ORTHO05D000001 2.4e-06 56.2 52 46.2
Sopen04g008920 Solanum pennellii HOM05D000002 ORTHO05D023153 2.4e-06 56.2 60 45.0
Sopen12g022440 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 52 46.2
Solyc03g034055.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.2e-06 55.8 52 46.2
Sopen00g009510 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 46 54.3
Sopen01g028650 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 114 28.1
Sopen01g046000 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 135 31.1
Sopen01g046010 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 135 31.1
Sopen04g022670 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 135 31.1
Sopen05g008070 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 111 27.9
Sopen06g020000 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 110 29.1
Sopen07g024660 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 46 54.3
Sopen09g005960 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 46 56.5
Sopen09g027000 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 135 31.1
Sopen10g006830 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 43 58.1
Sopen04g008290 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-06 55.5 137 29.9
Sopen04g031180 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-06 55.5 112 29.5
Sopen05g015240 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-06 55.5 67 41.8
Sopen06g014570 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-06 55.5 52 53.8
Sopen06g015400 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-06 55.5 79 36.7
Gohir.A07G161305 Gossypium hirsutum HOM05D000002 ORTHO05D000047 5.4e-06 55.1 99 29.3
Solyc11g072935.1 Solanum lycopersicum HOM05D000002 ORTHO05D023153 5.4e-06 55.1 46 47.8
Solyc12g011233.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.4e-06 55.1 73 37.0
Sopen07g026660 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-06 55.1 79 36.7
Sopen12g012640 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-06 55.1 110 29.1
Sopen12g013990 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-06 55.1 148 27.7
Sopen08g020600 Solanum pennellii HOM05D000002 ORTHO05D000001 7.0e-06 54.7 134 29.9
Solyc11g027897.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 9.2e-06 54.3 153 27.5
Sopen04g014070 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-06 54.3 114 25.4
Sopen04g020460 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-06 54.3 67 41.8
Sopen05g009210 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-06 54.3 170 27.6
Sopen07g006840 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-06 54.3 46 54.3
Sopen07g012570 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-06 54.3 67 38.8
Sopen07g026850 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-06 54.3 154 27.3


User provided reference genes

Program Settings