Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 3.9e-145 518.1 255 100.0
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 8.1e-143 510.4 255 98.0
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 3.0e-137 491.9 255 94.5
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 8.4e-132 473.8 257 91.1
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 8.4e-124 447.2 263 85.2
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.2e-122 443.4 263 84.8
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 5.3e-86 321.6 254 61.0
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 1.6e-85 320.1 254 60.6
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 2.0e-85 319.7 260 63.1
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 3.5e-85 318.9 260 63.1
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 4.5e-85 318.5 250 61.2
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 2.2e-84 316.2 263 62.4
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 1.9e-83 313.2 263 61.6
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 2.5e-83 312.8 255 67.1
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 3.2e-83 312.4 264 62.1
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 2.7e-82 309.3 260 58.5
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 4.7e-82 308.5 265 58.9
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 6.1e-82 308.1 264 56.4
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 5.2e-81 305.1 249 61.0
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 5.2e-81 305.1 253 60.1
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 1.2e-80 303.9 260 56.9
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 2.0e-80 303.1 253 58.9
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 2.0e-80 303.1 259 59.8
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 1.7e-79 300.1 261 57.5
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 2.2e-79 299.7 258 56.2
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 2.8e-79 299.3 262 56.1
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 3.7e-79 298.9 258 58.1
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 1.1e-78 297.4 258 57.8
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.8e-78 296.6 263 57.0
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 1.8e-78 296.6 249 59.4
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 3.1e-78 295.8 263 56.7
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 3.1e-78 295.8 266 59.0
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 4.1e-78 295.4 260 55.8
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 5.4e-78 295.0 252 59.5
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 5.4e-78 295.0 262 58.4
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 1.2e-77 293.9 260 56.2
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 2.7e-77 292.7 258 57.0
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 5.9e-77 291.6 242 59.5
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 7.7e-77 291.2 250 57.6
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 7.7e-77 291.2 252 59.9
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 1.0e-76 290.8 263 55.5
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 1.7e-76 290.0 251 59.4
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 2.3e-76 289.7 262 57.6
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.3e-76 289.7 252 59.5
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 2.3e-76 289.7 263 55.5
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 2.9e-76 289.3 252 59.5
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.9e-76 289.3 252 59.5
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 3.8e-76 288.9 265 57.0
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.8e-76 288.9 252 59.5
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 3.8e-76 288.9 266 56.0
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 5.0e-76 288.5 265 56.6
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 1.5e-75 287.0 249 56.6
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 1.9e-75 286.6 253 55.3
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.5e-75 286.2 252 59.1
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.5e-75 286.2 252 59.1
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 3.3e-75 285.8 251 58.2
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 5.5e-75 285.0 261 57.5
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 4.7e-74 282.0 265 52.5
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 6.1e-74 281.6 260 56.2
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 1.8e-73 280.0 267 55.4
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 2.3e-73 279.6 222 63.1
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 3.0e-73 279.3 229 62.9
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 6.8e-73 278.1 266 54.1
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 2.0e-72 276.6 265 53.6
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 2.6e-72 276.2 265 51.7
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 3.4e-72 275.8 263 54.8
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 5.7e-72 275.0 266 54.5
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 9.8e-72 274.2 265 53.2
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 1.7e-71 273.5 219 64.4
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 1.7e-71 273.5 256 52.3
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 3.7e-71 272.3 309 46.9
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 4.9e-71 271.9 269 54.3
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 6.3e-71 271.6 269 53.9
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 8.3e-71 271.2 263 50.6
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 1.4e-70 270.4 257 52.9
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 1.8e-70 270.0 259 53.3
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 3.2e-70 269.2 259 52.9
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 3.2e-70 269.2 259 52.9
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 3.2e-70 269.2 259 52.9
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 1.6e-69 266.9 262 53.8
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 1.6e-69 266.9 223 59.6
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 2.7e-69 266.2 263 52.5
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 3.5e-69 265.8 265 52.8
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 4.5e-69 265.4 257 52.1
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 1.0e-68 264.2 268 51.5
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 1.7e-68 263.5 266 52.6
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 1.7e-68 263.5 265 49.8
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 2.9e-68 262.7 265 50.9
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 9.5e-67 257.7 256 52.3
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 8.9e-65 251.1 212 59.4
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 1.2e-64 250.8 250 49.6
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 2.2e-63 246.5 267 48.3
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 8.3e-63 244.6 199 59.3
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 1.0e-60 237.7 252 49.2
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 5.0e-60 235.3 234 51.3
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 4.3e-59 232.3 247 48.6
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 8.1e-58 228.0 260 47.7
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 5.2e-57 225.3 190 60.0
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 2.0e-56 223.4 164 68.9
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 1.5e-48 197.2 166 59.0
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 2.4e-46 189.9 153 60.8
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 6.0e-45 185.3 158 56.3
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 6.8e-41 171.8 189 48.1
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 5.8e-40 168.7 159 49.7
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 5.8e-40 168.7 159 49.7
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 5.8e-40 168.7 159 49.7
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 1.7e-39 167.2 251 39.8
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 4.9e-39 165.6 157 49.0
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 2.8e-34 149.8 261 36.4
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 3.1e-33 146.4 149 50.3
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 4.0e-33 146.0 124 56.5
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 2.6e-32 143.3 110 62.7
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 2.2e-31 140.2 216 40.7
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 4.2e-30 136.0 227 37.4
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 1.2e-29 134.4 111 55.9
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 1.6e-26 124.0 160 43.1
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 4.0e-25 119.4 165 46.1
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 7.9e-21 105.1 99 52.5
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 1.1e-19 101.3 106 48.1
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 1.9e-19 100.5 95 50.5
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 1.9e-19 100.5 87 50.6
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 1.3e-15 87.8 82 57.3
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 1.1e-14 84.7 159 38.4
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 1.4e-14 84.3 72 54.2
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 1.9e-14 84.0 80 51.2
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 2.7e-13 80.1 87 47.1
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 8.7e-12 75.1 91 40.7
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 4.8e-10 69.3 48 66.7
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 1.1e-09 68.2 91 40.7


User provided reference genes

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