Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g073055.1 Solanum lycopersicum HOM05D000174 ORTHO05D000795 4.1e-44 181.0 92 100.0
Solyc11g073075.1 Solanum lycopersicum HOM05D000174 ORTHO05D000795 3.3e-30 134.8 164 53.0
Sopen11g030720 Solanum pennellii HOM05D000174 ORTHO05D000795 2.0e-27 125.6 165 50.3
Sopen11g030730 Solanum pennellii HOM05D000174 ORTHO05D000795 1.6e-24 115.9 154 50.0
PGSC0003DMG400015533 Solanum tuberosum HOM05D000174 ORTHO05D000795 8.8e-23 110.2 168 47.6
CAN.G755.3 Capsicum annuum HOM05D000174 ORTHO05D000795 2.2e-21 105.5 172 44.2
Sopen11g030700 Solanum pennellii HOM05D000174 ORTHO05D000795 3.7e-21 104.8 154 46.8
PGSC0003DMG400015531 Solanum tuberosum HOM05D000174 ORTHO05D000795 4.8e-21 104.4 172 45.3
PGSC0003DMG400015534 Solanum tuberosum HOM05D000174 ORTHO05D000795 6.3e-21 104.0 167 46.1
PGSC0003DMG400015557 Solanum tuberosum HOM05D000174 ORTHO05D000795 3.1e-20 101.7 173 45.7
CAN.G755.1 Capsicum annuum HOM05D000174 ORTHO05D000795 2.2e-18 95.5 173 42.2
CAN.G420.4 Capsicum annuum HOM05D000174 ORTHO05D000795 2.1e-16 89.0 163 42.3
Nitab4.5_0003498g0040 Nicotiana tabacum HOM05D000174 ORTHO05D000795 8.0e-16 87.0 184 39.1
Nitab4.5_0009215g0010 Nicotiana tabacum HOM05D000174 ORTHO05D000795 1.4e-15 86.3 183 39.9
Nitab4.5_0000888g0020 Nicotiana tabacum HOM05D000174 ORTHO05D000795 4.0e-15 84.7 184 39.1
CAN.G1289.6 Capsicum annuum HOM05D000174 ORTHO05D000795 5.2e-15 84.3 177 38.4
PGSC0003DMG400015532 Solanum tuberosum HOM05D000174 ORTHO05D000795 8.8e-15 83.6 166 42.2
Nitab4.5_0000888g0010 Nicotiana tabacum HOM05D000174 ORTHO05D000795 1.5e-14 82.8 175 40.0
Nitab4.5_0001800g0130 Nicotiana tabacum HOM05D000174 ORTHO05D000795 1.5e-14 82.8 176 42.0
Sopen11g030710 Solanum pennellii HOM05D000174 ORTHO05D000795 2.6e-14 82.0 158 40.5
Nitab4.5_0002882g0050 Nicotiana tabacum HOM05D000174 ORTHO05D000795 2.8e-13 78.6 186 37.1
Nitab4.5_0012883g0010 Nicotiana tabacum HOM05D000174 ORTHO05D000795 6.3e-13 77.4 180 39.4
Peaxi162Scf00411g00026 Petunia axillaris HOM05D000174 ORTHO05D000795 8.3e-13 77.0 157 38.9
Solyc11g073060.3 Solanum lycopersicum HOM05D000174 ORTHO05D000795 3.1e-12 75.1 161 42.2
PGSC0003DMG400015558 Solanum tuberosum HOM05D000174 ORTHO05D000795 4.1e-12 74.7 166 38.0
Peaxi162Scf00411g00039 Petunia axillaris HOM05D000174 ORTHO05D000795 2.8e-08 62.0 162 36.4
PGR004G1444 Punica granatum HOM05D000174 ORTHO05D000795 8.0e-08 60.5 62 48.4
PGSC0003DMG401030312 Solanum tuberosum HOM05D000174 ORTHO05D000795 3.0e-07 58.5 164 33.5
RcHm_v2.0_Chr5g0062951 Rosa chinensis HOM05D000174 ORTHO05D000795 6.8e-07 57.4 58 56.9
FvH4_3g35040 Fragaria vesca HOM05D000174 ORTHO05D000795 8.9e-07 57.0 61 52.5
FAN11G3905 Fragaria x ananassa HOM05D000174 ORTHO05D000795 8.9e-07 57.0 61 52.5
RcHm_v2.0_Chr5g0062991 Rosa chinensis HOM05D000174 ORTHO05D000795 8.9e-07 57.0 58 55.2
FAN21G2482 Fragaria x ananassa HOM05D000174 ORTHO05D000795 1.2e-06 56.6 61 50.8
CAN.G394.25 Capsicum annuum HOM05D000174 ORTHO05D000795 2.6e-06 55.5 167 31.7
CiPaw.09G188000 Carya illinoinensis HOM05D000174 ORTHO05D000795 3.4e-06 55.1 56 53.6
Manes.08G076885 Manihot esculenta HOM05D000174 ORTHO05D000795 3.4e-06 55.1 99 34.3
Nn2g12894 Nelumbo nucifera HOM05D000174 ORTHO05D000795 3.4e-06 55.1 78 42.3
Manes.09G090300 Manihot esculenta HOM05D000174 ORTHO05D000795 5.7e-06 54.3 79 38.0
VMungo1080G0578 Vigna mungo HOM05D000174 ORTHO05D000795 7.5e-06 53.9 81 43.2
FAN16G3126 Fragaria x ananassa HOM05D000174 ORTHO05D000795 9.8e-06 53.5 68 48.5
MD03G1099300 Malus domestica HOM05D000174 ORTHO05D000795 9.8e-06 53.5 68 45.6


User provided reference genes

Program Settings