Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 8.4e-134 480.3 239 100.0
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 5.0e-102 374.8 239 78.7
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 4.2e-101 371.7 247 78.5
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 4.2e-93 345.1 169 100.0
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 6.1e-92 341.3 172 96.5
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 1.4e-83 313.5 249 67.1
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 5.7e-82 308.1 241 65.6
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 1.3e-81 307.0 240 66.7
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 2.2e-81 306.2 234 69.7
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 2.8e-81 305.8 239 66.1
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.6e-79 300.1 167 85.6
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 2.7e-79 299.3 229 66.8
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 2.7e-79 299.3 259 62.9
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 4.5e-79 298.5 235 65.5
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.0e-78 297.4 168 83.9
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 3.8e-78 295.4 239 63.6
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 5.0e-78 295.0 238 63.4
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 6.6e-78 294.7 238 63.4
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 8.6e-78 294.3 229 65.1
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 1.5e-77 293.5 235 66.4
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 1.9e-77 293.1 240 63.8
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 3.3e-77 292.4 232 67.7
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 3.3e-77 292.4 177 79.7
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 4.3e-77 292.0 233 66.5
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 7.3e-77 291.2 146 95.9
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 9.5e-77 290.8 219 69.9
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 9.5e-77 290.8 230 67.0
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 1.2e-76 290.4 224 65.6
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 1.6e-76 290.0 226 67.7
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 2.1e-76 289.7 223 66.4
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 4.7e-76 288.5 246 63.8
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 6.1e-76 288.1 242 62.4
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 1.0e-75 287.3 251 61.4
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 1.0e-75 287.3 242 63.2
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 1.4e-75 287.0 168 81.5
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 1.8e-75 286.6 175 77.1
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 1.8e-75 286.6 188 72.3
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.3e-75 286.2 171 78.9
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 2.3e-75 286.2 169 79.9
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 2.3e-75 286.2 250 64.0
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 2.3e-75 286.2 194 72.7
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 3.0e-75 285.8 177 76.8
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 3.0e-75 285.8 223 65.9
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 8.9e-75 284.3 282 56.4
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 1.2e-74 283.9 222 65.8
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 2.0e-74 283.1 223 65.9
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 3.4e-74 282.3 168 79.2
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 3.4e-74 282.3 175 77.7
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 3.4e-74 282.3 235 62.1
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 3.4e-74 282.3 235 62.1
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 4.4e-74 282.0 175 77.1
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 7.5e-74 281.2 227 65.6
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 7.5e-74 281.2 227 65.6
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 7.5e-74 281.2 227 65.6
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 9.8e-74 280.8 171 77.8
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 9.8e-74 280.8 168 80.4
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.3e-73 280.4 244 61.5
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.3e-73 280.4 207 68.6
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.7e-73 280.0 209 70.3
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 2.2e-73 279.6 220 67.3
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 2.9e-73 279.3 225 64.4
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 3.7e-73 278.9 237 61.6
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 3.7e-73 278.9 232 62.1
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 4.9e-73 278.5 226 64.6
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 8.3e-73 277.7 219 67.1
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 1.1e-72 277.3 227 65.2
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 1.4e-72 276.9 231 63.6
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.4e-72 276.9 167 79.0
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 1.8e-72 276.6 224 68.8
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 2.4e-72 276.2 180 75.0
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 2.4e-72 276.2 203 67.0
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 2.4e-72 276.2 180 75.6
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 3.2e-72 275.8 164 78.7
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 3.2e-72 275.8 164 78.7
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 4.1e-72 275.4 213 66.2
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 7.0e-72 274.6 166 78.3
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 2.7e-71 272.7 238 61.3
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 6.0e-71 271.6 175 71.4
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 7.8e-71 271.2 233 63.1
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.3e-70 270.4 164 79.3
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 2.3e-70 269.6 236 63.6
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 5.0e-70 268.5 204 68.1
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 5.0e-70 268.5 204 68.1
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 6.6e-70 268.1 167 74.3
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 1.1e-69 267.3 165 78.2
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 2.5e-69 266.2 170 77.1
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 1.6e-68 263.5 156 80.1
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 2.1e-68 263.1 173 72.3
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 1.5e-66 256.9 269 55.8
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.1e-64 250.8 175 70.9
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 3.2e-64 249.2 188 66.5
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 3.0e-62 242.7 178 66.9
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 8.6e-62 241.1 176 69.9
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 1.1e-59 234.2 169 64.5
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 5.8e-58 228.4 176 64.8
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 9.9e-58 227.6 175 62.3
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 4.9e-57 225.3 213 55.9
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 2.4e-56 223.0 151 72.8
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 4.0e-51 205.7 121 81.0
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 4.0e-51 205.7 131 74.0
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 4.4e-50 202.2 210 54.3
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 5.4e-48 195.3 130 71.5
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 8.7e-46 188.0 111 80.2
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 4.0e-43 179.1 116 73.3
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.6e-42 176.4 113 73.5
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.7e-41 173.7 113 72.6
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 4.9e-41 172.2 113 72.6
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 6.0e-39 165.2 178 47.8
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.3e-38 164.1 134 64.2
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 2.3e-38 163.3 184 47.8
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 5.1e-38 162.2 109 72.5
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 2.1e-36 156.8 109 72.5
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 2.1e-36 156.8 103 73.8
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 3.0e-22 109.8 158 39.9
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 6.2e-20 102.1 125 51.2
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.9e-16 90.5 58 72.4
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 9.3e-16 88.2 189 29.1
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 2.5e-13 80.1 177 27.7
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 4.3e-13 79.3 188 27.7
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 2.2e-12 77.0 67 58.2


User provided reference genes

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