Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 7.8e-197 690.3 346 100.0
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.9e-187 659.1 345 95.7
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 3.5e-157 558.5 344 84.3
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 5.3e-153 544.7 346 81.5
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.6e-152 542.3 342 82.2
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 4.3e-147 525.0 277 94.2
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 8.7e-140 500.7 342 76.3
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 8.0e-117 424.5 340 64.4
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 6.7e-116 421.4 341 64.2
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 2.0e-115 419.9 352 62.2
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 5.2e-108 395.2 339 60.2
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 1.2e-107 394.0 278 70.1
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 2.2e-106 389.8 339 61.9
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 3.1e-105 386.0 288 65.6
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 2.0e-104 383.3 346 58.1
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 2.2e-103 379.8 342 56.1
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 2.2e-103 379.8 347 56.2
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 3.8e-103 379.0 344 57.6
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 8.5e-103 377.9 417 51.3
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 1.5e-102 377.1 343 57.4
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 2.5e-102 376.3 288 64.2
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 5.5e-102 375.2 340 57.4
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 9.4e-102 374.4 299 63.9
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 2.1e-101 373.2 344 57.8
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 1.4e-100 370.5 347 55.0
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 1.5e-99 367.1 339 56.6
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 5.7e-99 365.2 314 57.3
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 5.7e-99 365.2 343 56.3
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 7.5e-99 364.8 343 56.6
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 1.7e-98 363.6 346 55.5
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 4.8e-98 362.1 300 62.0
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 4.8e-98 362.1 343 55.7
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.4e-97 360.5 338 56.5
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.4e-97 360.5 347 53.0
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 2.4e-97 359.8 331 56.5
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 3.1e-97 359.4 347 52.7
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.1e-97 359.4 347 52.7
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 7.0e-97 358.2 325 57.8
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 7.0e-97 358.2 331 56.5
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 7.0e-97 358.2 352 54.3
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 9.1e-97 357.8 343 55.1
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.6e-96 357.1 347 52.7
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 2.0e-96 356.7 349 54.2
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 2.7e-96 356.3 339 55.8
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 3.5e-96 355.9 347 55.6
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 3.5e-96 355.9 302 60.3
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 4.5e-96 355.5 344 55.8
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 4.5e-96 355.5 347 52.4
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.0e-95 354.4 271 64.6
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.3e-95 354.0 341 55.7
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 1.7e-95 353.6 346 55.2
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 2.3e-95 353.2 341 55.7
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 2.3e-95 353.2 338 55.3
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.9e-95 352.8 341 53.4
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 3.8e-95 352.4 338 55.9
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 3.8e-95 352.4 342 55.0
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 3.8e-95 352.4 355 52.1
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 5.0e-95 352.1 287 60.3
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 6.6e-95 351.7 340 55.3
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 1.1e-94 350.9 285 62.8
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 1.1e-94 350.9 343 54.5
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 1.9e-94 350.1 260 63.5
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 2.5e-94 349.7 339 54.3
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 5.5e-94 348.6 290 60.7
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 5.5e-94 348.6 345 53.3
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 9.5e-94 347.8 340 56.2
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.2e-93 347.4 340 54.7
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.2e-93 347.4 342 54.4
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 2.8e-93 346.3 339 54.3
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 2.8e-93 346.3 339 54.3
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.8e-93 346.3 261 65.1
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 6.1e-93 345.1 269 63.2
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 6.1e-93 345.1 338 53.8
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 1.8e-92 343.6 339 54.3
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 2.3e-92 343.2 302 59.3
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 6.8e-92 341.7 274 63.9
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 2.0e-91 340.1 361 52.1
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 3.4e-91 339.3 344 53.2
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 3.4e-91 339.3 295 58.3
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 5.7e-91 338.6 249 66.3
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 1.3e-90 337.4 259 64.5
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 2.8e-90 336.3 242 68.2
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 1.7e-87 327.0 298 57.4
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 8.9e-84 314.7 261 60.5
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 3.5e-80 302.8 308 54.2
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.1e-78 297.7 254 57.9
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.2e-75 287.7 256 58.6
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 9.8e-75 284.6 305 51.5
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 3.2e-73 279.6 219 62.6
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.2e-65 253.1 257 52.5
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 8.6e-63 245.0 268 48.1
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 3.8e-58 229.6 229 52.8
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 3.8e-58 229.6 229 52.8
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 8.4e-58 228.4 270 47.8
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 1.9e-57 227.3 250 46.0
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 2.1e-53 213.8 269 43.5
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 2.1e-48 197.2 162 62.3
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 1.9e-46 190.7 146 59.6
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 2.1e-45 187.2 162 55.6
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.8e-45 186.8 162 57.4
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 6.0e-40 169.1 130 62.3
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-39 168.3 300 37.0
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 1.5e-35 154.5 128 60.9
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 1.7e-34 151.0 123 58.5
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 4.2e-33 146.4 117 61.5
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.1e-29 134.0 78 80.8
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 1.3e-26 124.8 139 48.2
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 9.7e-22 108.6 111 49.5
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 6.3e-21 105.9 305 30.8
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 5.5e-17 92.8 78 53.8
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 4.6e-16 89.7 77 55.8
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 2.4e-12 77.4 288 27.4
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 9.1e-12 75.5 73 47.9
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 2.9e-10 70.5 209 27.8
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 5.1e-07 59.7 95 37.9


User provided reference genes

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