Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 2.5e-223 778.5 394 100.0
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 3.1e-202 708.4 368 97.6
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 1.2e-188 663.3 368 91.8
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 7.3e-167 590.9 369 82.7
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 4.4e-164 581.6 369 81.6
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 3.0e-152 542.3 369 74.0
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.1e-151 540.4 351 78.9
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.1e-101 374.4 253 79.8
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 2.7e-97 359.8 375 52.0
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 1.0e-96 357.8 384 50.8
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 5.2e-96 355.5 381 49.9
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 1.2e-95 354.4 377 52.3
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 1.5e-95 354.0 378 51.3
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 2.5e-90 336.7 365 50.4
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 7.2e-90 335.1 372 51.3
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 9.4e-90 334.7 376 50.3
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.0e-88 331.3 379 49.6
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 1.5e-87 327.4 373 49.9
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 4.8e-86 322.4 379 48.0
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 1.8e-85 320.5 374 49.5
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 2.4e-85 320.1 381 48.0
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 9.1e-85 318.2 383 47.5
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.6e-84 317.4 358 50.8
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 7.7e-84 315.1 378 48.7
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 2.9e-83 313.2 370 46.5
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 8.6e-83 311.6 372 48.4
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 1.2e-81 307.8 373 44.2
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.1e-81 307.0 374 48.4
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 3.6e-81 306.2 372 47.6
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 4.7e-81 305.8 370 46.5
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 4.7e-81 305.8 371 47.4
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 4.7e-81 305.8 373 46.6
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 1.0e-80 304.7 374 48.4
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 2.0e-79 300.4 375 46.7
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 2.6e-79 300.1 373 46.1
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 2.6e-79 300.1 370 47.6
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 3.4e-79 299.7 378 46.8
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 5.7e-79 298.9 373 46.1
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 5.7e-79 298.9 372 44.4
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 7.5e-79 298.5 374 45.7
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 9.8e-79 298.1 373 44.8
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.3e-78 297.7 373 44.5
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.2e-78 297.0 379 47.2
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 4.9e-78 295.8 371 44.5
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 6.3e-78 295.4 368 45.7
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 8.3e-78 295.0 373 44.0
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 8.3e-78 295.0 373 44.0
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 1.8e-77 293.9 373 45.8
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 3.1e-77 293.1 374 44.9
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 5.4e-77 292.4 383 44.6
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 7.0e-77 292.0 373 43.7
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 9.2e-77 291.6 371 44.5
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 3.5e-76 289.7 375 43.5
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 3.5e-76 289.7 374 45.2
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 4.5e-76 289.3 358 48.3
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 1.3e-75 287.7 377 44.0
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.7e-75 287.3 374 44.4
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 2.9e-75 286.6 373 46.9
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 3.8e-75 286.2 371 45.3
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 5.0e-75 285.8 350 48.3
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 1.5e-74 284.3 385 43.6
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.9e-74 283.9 385 43.9
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 2.5e-74 283.5 352 47.4
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 7.3e-74 282.0 374 45.5
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 2.1e-73 280.4 376 46.0
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 8.0e-73 278.5 372 44.1
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 7.5e-71 271.9 393 42.7
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 7.5e-71 271.9 367 42.8
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.1e-69 268.1 380 40.5
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 4.1e-69 266.2 379 40.4
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 4.1e-69 266.2 374 44.4
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 5.4e-69 265.8 376 43.6
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.6e-68 264.2 316 48.4
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 3.5e-68 263.1 374 40.9
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 3.5e-68 263.1 380 40.5
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 7.8e-68 261.9 380 42.1
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 6.6e-67 258.8 379 40.6
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.2e-65 254.6 381 39.9
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.6e-65 254.2 381 39.6
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 4.7e-65 252.7 379 40.1
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 1.1e-64 251.5 379 41.2
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 1.1e-64 251.5 416 37.3
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.8e-64 250.8 380 39.5
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.8e-64 250.8 380 39.5
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 2.3e-64 250.4 338 44.7
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 3.1e-64 250.0 337 43.6
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 8.9e-64 248.4 381 39.4
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 2.6e-63 246.9 377 43.2
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.2e-61 240.0 285 45.6
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.7e-60 236.9 337 43.3
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 7.8e-60 235.3 325 40.9
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 6.8e-56 222.2 352 42.3
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.0e-51 208.4 301 42.5
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 1.0e-51 208.4 381 36.5
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 8.9e-48 195.3 327 40.1
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 1.1e-42 178.3 342 38.9
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 1.4e-40 171.4 209 42.6
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 2.6e-39 167.2 161 55.9
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 4.6e-36 156.4 158 51.9
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 7.3e-34 149.1 144 52.8
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 1.3e-33 148.3 414 28.7
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 9.6e-26 122.1 169 41.4
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 6.2e-25 119.4 381 28.9
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 1.2e-23 115.2 112 51.8
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 3.8e-22 110.2 133 47.4
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 9.3e-21 105.5 434 24.7
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 4.8e-17 93.2 66 69.7
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 4.5e-15 86.7 160 35.6
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.0e-14 85.5 126 47.6
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 7.9e-12 75.9 117 39.3
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 7.9e-12 75.9 80 51.2
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.9e-10 71.2 366 23.5
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 6.9e-08 62.8 56 50.0
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 2.2e-06 57.8 44 59.1
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 5.0e-06 56.6 63 52.4


User provided reference genes

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