Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 4.8e-168 594.3 286 100.0
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 1.1e-159 566.6 283 96.5
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 2.0e-142 509.2 287 87.8
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 2.0e-142 509.2 285 87.0
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 9.4e-140 500.4 285 85.3
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 1.5e-108 396.7 288 66.3
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 4.7e-107 391.7 284 65.5
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 2.6e-105 386.0 288 64.6
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 2.2e-104 382.9 288 63.2
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 4.9e-104 381.7 283 64.7
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 8.3e-104 380.9 289 64.0
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 1.6e-102 376.7 290 62.8
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 1.2e-99 367.1 289 60.6
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 7.6e-97 357.8 290 59.0
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 1.6e-94 350.1 289 59.9
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 1.6e-94 350.1 271 63.8
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 3.5e-94 349.0 289 56.7
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 7.8e-94 347.8 287 58.5
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.0e-93 347.4 286 60.1
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 3.0e-93 345.9 290 59.3
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 1.1e-92 344.0 185 87.6
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 1.6e-91 340.1 316 56.3
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 2.1e-91 339.7 280 59.6
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 6.2e-91 338.2 287 54.7
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 1.8e-90 336.7 294 56.1
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 5.8e-89 331.6 297 55.6
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 1.3e-88 330.5 277 58.8
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 1.7e-88 330.1 287 57.1
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 2.2e-88 329.7 294 56.5
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 2.2e-88 329.7 287 56.8
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 2.2e-88 329.7 292 56.5
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 2.9e-88 329.3 283 60.4
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 3.8e-88 328.9 287 56.8
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 4.9e-88 328.6 285 58.6
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 4.9e-88 328.6 288 56.6
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.4e-87 327.0 286 57.0
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 1.9e-87 326.6 289 54.7
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 4.2e-87 325.5 288 58.3
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 4.2e-87 325.5 286 57.0
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 1.2e-86 323.9 286 56.3
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 2.7e-86 322.8 286 56.6
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 6.0e-86 321.6 289 54.7
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 6.0e-86 321.6 284 56.3
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 3.0e-85 319.3 282 56.0
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 1.6e-83 313.5 284 56.0
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 2.8e-83 312.8 290 55.5
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 6.2e-83 311.6 342 48.5
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 8.1e-83 311.2 269 57.2
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 5.8e-81 305.1 288 54.9
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 9.9e-81 304.3 340 48.2
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 6.4e-80 301.6 284 53.9
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 8.4e-80 301.2 293 54.9
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 9.3e-79 297.7 286 54.2
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 1.0e-77 294.3 287 53.7
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 8.7e-77 291.2 290 53.4
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.9e-76 290.0 281 52.3
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 6.2e-75 285.0 280 52.9
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 1.1e-74 284.3 287 48.8
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 2.4e-74 283.1 268 55.6
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 3.4e-73 279.3 199 66.8
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 4.9e-72 275.4 339 47.2
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 4.9e-72 275.4 336 44.9
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 1.4e-71 273.9 318 45.0
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 7.9e-70 268.1 209 61.7
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 8.7e-69 264.6 289 48.4
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 4.3e-68 262.3 291 47.4
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 2.1e-67 260.0 289 44.6
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 2.4e-66 256.5 217 59.4
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 5.3e-66 255.4 288 44.4
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 2.6e-65 253.1 290 43.8
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 2.6e-65 253.1 285 44.9
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 5.8e-65 251.9 287 44.3
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 1.3e-64 250.8 288 45.5
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 1.3e-64 250.8 289 44.6
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 2.2e-64 250.0 280 44.6
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 2.9e-64 249.6 288 43.8
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 3.2e-63 246.1 289 45.7
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 4.2e-63 245.7 290 43.1
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 2.7e-62 243.0 321 40.2
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 4.6e-62 242.3 310 41.6
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 6.7e-61 238.4 296 40.9
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 8.7e-61 238.0 187 63.6
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.5e-60 237.3 240 51.7
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.8e-58 230.3 244 50.8
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.2e-57 227.6 261 47.5
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 2.9e-56 223.0 265 41.5
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 6.5e-56 221.9 274 43.8
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 1.9e-55 220.3 292 41.4
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 3.2e-55 219.5 230 52.2
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 3.2e-55 219.5 290 42.8
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 4.2e-55 219.2 275 42.9
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 3.9e-53 212.6 183 55.2
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 2.8e-51 206.5 161 60.2
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 6.3e-51 205.3 331 39.6
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 1.4e-50 204.1 216 50.0
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 3.8e-48 196.1 161 61.5
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 3.6e-46 189.5 277 42.2
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 3.3e-44 183.0 286 33.2
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 3.9e-37 159.5 280 35.0
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 4.8e-35 152.5 138 55.1
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 2.4e-34 150.2 255 32.5
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 2.2e-32 143.7 261 31.8
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 5.0e-24 115.9 103 49.5
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-23 114.4 198 33.8
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.5e-23 113.6 71 70.4
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 3.7e-19 99.8 84 56.0
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 1.8e-10 70.9 35 88.6
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 4.1e-10 69.7 97 40.2
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 1.0e-08 65.1 81 42.0
QL01p005881 Quercus lobata HOM05D006389 ORTHO05D007863 3.6e-06 56.6 79 39.2


User provided reference genes

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