Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g032180.1 Solanum lycopersicum HOM05D001876 ORTHO05D002002 5.6e-33 144.1 93 100.0
Sopen07g034150 Solanum pennellii HOM05D001876 ORTHO05D002002 3.2e-12 75.1 98 48.0
Peaxi162Scf00232g00036 Petunia axillaris HOM05D001876 ORTHO05D002002 6.6e-10 67.4 98 43.9
Nitab4.5_0001303g0100 Nicotiana tabacum HOM05D001876 ORTHO05D002002 1.1e-09 66.6 98 42.9
Nitab4.5_0000152g0190 Nicotiana tabacum HOM05D001876 ORTHO05D002002 2.5e-09 65.5 98 41.8
Dinv10376 Davidia involucrata HOM05D001876 ORTHO05D002002 5.6e-09 64.3 98 48.0
GSVIVG01014783001 Vitis vinifera HOM05D001876 ORTHO05D002002 9.6e-09 63.5 98 38.8
Cpa.g.sc27.194 Carica papaya HOM05D001876 ORTHO05D002002 1.6e-08 62.8 98 39.8
DCAR_017598 Daucus carota HOM05D001876 ORTHO05D002002 1.6e-08 62.8 98 39.8
Solyc03g071660.2 Solanum lycopersicum HOM05D001876 ORTHO05D002002 1.6e-08 62.8 97 41.2
FAN21G2243 Fragaria x ananassa HOM05D001876 ORTHO05D002002 2.8e-08 62.0 98 37.8
Hma1.2p1_0193F.1_g084140 Hydrangea macrophylla HOM05D001876 ORTHO05D002002 2.8e-08 62.0 98 39.8
Hma1.2p1_2995F.1_g331450 Hydrangea macrophylla HOM05D001876 ORTHO05D002002 2.8e-08 62.0 98 39.8
vmacro09608 Vaccinium macrocarpon HOM05D001876 ORTHO05D002002 2.8e-08 62.0 98 51.0
Rhsim06G0234000 Rhododendron simsii HOM05D001876 ORTHO05D002002 4.8e-08 61.2 98 38.8
TAR626G0018 Trochodendron aralioides HOM05D001876 ORTHO05D002002 4.8e-08 61.2 98 38.8
Solyc07g021140.1 Solanum lycopersicum HOM05D001876 ORTHO05D002002 6.2e-08 60.8 40 70.0
FvH4_3g41980 Fragaria vesca HOM05D001876 ORTHO05D002002 8.1e-08 60.5 98 46.9
FAN11G3885 Fragaria x ananassa HOM05D001876 ORTHO05D002002 8.1e-08 60.5 98 43.9
FAN16G1749 Fragaria x ananassa HOM05D001876 ORTHO05D002002 8.1e-08 60.5 98 44.9
FAN25G1930 Fragaria x ananassa HOM05D001876 ORTHO05D002002 8.1e-08 60.5 98 37.8
TAR629G2148 Trochodendron aralioides HOM05D001876 ORTHO05D002002 8.1e-08 60.5 98 37.8
MBI15_g41024_MAGBIO Magnolia biondii HOM05D001876 ORTHO05D002002 1.1e-07 60.1 98 37.8
Cfa000007 Carpinus fangiana HOM05D001876 ORTHO05D002002 1.4e-07 59.7 99 37.4
Lsat_1_v5_gn_7_116441 Lactuca sativa HOM05D001876 ORTHO05D002002 2.4e-07 58.9 98 34.7
Haze_07052 Corylus avellana HOM05D001876 ORTHO05D002002 3.1e-07 58.5 97 38.1
Dinv04380 Davidia involucrata HOM05D001876 ORTHO05D002002 3.1e-07 58.5 98 37.8
GSVIVG01006976001 Vitis vinifera HOM05D001876 ORTHO05D002002 3.1e-07 58.5 98 38.8
MBI14_g30654_MAGBIO Magnolia biondii HOM05D001876 ORTHO05D002002 5.3e-07 57.8 98 49.0
Solyc12g062490.1 Solanum lycopersicum HOM05D001876 ORTHO05D002002 5.3e-07 57.8 39 71.8
Ciclev10014046m.g Citrus clementina HOM05D001876 ORTHO05D002002 6.9e-07 57.4 39 61.5
Nn1g07691 Nelumbo nucifera HOM05D001876 ORTHO05D002002 6.9e-07 57.4 98 36.7
Cfa016942 Carpinus fangiana HOM05D001876 ORTHO05D002002 9.0e-07 57.0 98 34.7
Haze_09897 Corylus avellana HOM05D001876 ORTHO05D002002 9.0e-07 57.0 98 34.7
Rhsim04G0009400 Rhododendron simsii HOM05D001876 ORTHO05D002002 9.0e-07 57.0 98 49.0
SGA_v2.0_scaffold42G15938 Striga asiatica HOM05D001876 ORTHO05D002002 9.0e-07 57.0 98 35.7
CiPaw.10G084200 Carya illinoinensis HOM05D001876 ORTHO05D002002 1.2e-06 56.6 98 36.7
Eucgr.F02007 Eucalyptus grandis HOM05D001876 ORTHO05D002002 1.2e-06 56.6 39 66.7
Dinv06828 Davidia involucrata HOM05D001876 ORTHO05D002002 1.5e-06 56.2 98 36.7
HanXRQChr03g0077781 Helianthus annuus HOM05D001876 ORTHO05D002002 2.0e-06 55.8 98 42.9
Sopen02g009040 Solanum pennellii HOM05D001876 ORTHO05D002002 2.0e-06 55.8 39 69.2
TAR627G0307 Trochodendron aralioides HOM05D001876 ORTHO05D002002 2.0e-06 55.8 98 36.7
DCAR_013771 Daucus carota HOM05D001876 ORTHO05D002002 2.6e-06 55.5 94 37.2
HanXRQChr11g0334581 Helianthus annuus HOM05D001876 ORTHO05D002002 2.6e-06 55.5 98 33.7
RcHm_v2.0_Chr4g0386551 Rosa chinensis HOM05D001876 ORTHO05D002002 3.4e-06 55.1 39 64.1
Atru.chr2.3845 Acer truncatum HOM05D001876 ORTHO05D002002 4.4e-06 54.7 98 33.7
Actinidia30365 Actinidia chinensis HOM05D001876 ORTHO05D002002 4.4e-06 54.7 39 64.1
Peaxi162Scf00006g00717 Petunia axillaris HOM05D001876 ORTHO05D002002 4.4e-06 54.7 98 36.7
Potri.016G002100 Populus trichocarpa HOM05D001876 ORTHO05D002002 4.4e-06 54.7 98 34.7
CSS0030826 Camellia sinensis var. sinensis HOM05D001876 ORTHO05D002002 5.8e-06 54.3 39 61.5
Dinv40896 Davidia involucrata HOM05D001876 ORTHO05D002002 5.8e-06 54.3 39 61.5
Nitab4.5_0000611g0240 Nicotiana tabacum HOM05D001876 ORTHO05D002002 5.8e-06 54.3 39 64.1
QL05p066377 Quercus lobata HOM05D001876 ORTHO05D002002 7.6e-06 53.9 39 61.5
RcHm_v2.0_Chr5g0075171 Rosa chinensis HOM05D001876 ORTHO05D002002 7.6e-06 53.9 98 46.9
Solyc10g005920.4 Solanum lycopersicum HOM05D001876 ORTHO05D002002 7.6e-06 53.9 39 66.7
Sopen10g001880 Solanum pennellii HOM05D001876 ORTHO05D002002 7.6e-06 53.9 39 66.7
vmacro11629 Vaccinium macrocarpon HOM05D001876 ORTHO05D002002 7.6e-06 53.9 39 61.5
Actinidia03661 Actinidia chinensis HOM05D001876 ORTHO05D002002 9.9e-06 53.5 39 59.0
ECA240G3156 Erigeron canadensis HOM05D001876 ORTHO05D002002 9.9e-06 53.5 98 45.9
Migut.H01726 Erythranthe guttata HOM05D001876 ORTHO05D002002 9.9e-06 53.5 39 61.5
Migut.H01727 Erythranthe guttata HOM05D001876 ORTHO05D002002 9.9e-06 53.5 39 61.5
MD03G1039800 Malus domestica HOM05D001876 ORTHO05D002002 9.9e-06 53.5 39 59.0
Potri.011G166400 Populus trichocarpa HOM05D001876 ORTHO05D002002 9.9e-06 53.5 98 33.7


User provided reference genes

Program Settings