Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 8.9e-53 209.9 100 100.0
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.6e-28 128.6 98 69.4
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 1.1e-26 123.2 98 67.3
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 9.3e-26 120.2 98 66.3
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 9.3e-26 120.2 98 65.3
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 9.3e-26 120.2 98 65.3
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.2e-25 119.8 98 66.3
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 4.6e-25 117.9 98 65.3
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 4.6e-25 117.9 98 65.3
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 4.6e-25 117.9 98 65.3
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 6.0e-25 117.5 98 64.3
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 1.0e-24 116.7 98 63.3
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 1.0e-24 116.7 98 63.3
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 1.7e-24 115.9 98 63.3
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 1.7e-24 115.9 98 63.3
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 1.7e-24 115.9 98 63.3
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 3.0e-24 115.2 97 62.9
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 5.1e-24 114.4 98 63.3
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 1.1e-23 113.2 98 61.2
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 7.3e-23 110.5 98 61.2
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 9.6e-23 110.2 101 60.4
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 9.6e-23 110.2 98 63.3
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 6.2e-22 107.5 90 61.1
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 1.8e-21 105.9 101 60.4
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.8e-21 105.9 98 60.2
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 3.4e-20 101.7 98 57.1
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 4.5e-20 101.3 88 62.5
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 4.5e-20 101.3 110 51.8
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 4.5e-20 101.3 110 51.8
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 4.5e-20 101.3 110 51.8
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 4.5e-20 101.3 110 51.8
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 4.5e-20 101.3 110 51.8
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 5.8e-20 100.9 104 55.8
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 7.6e-20 100.5 88 61.4
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 7.6e-20 100.5 97 57.7
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.7e-19 99.4 100 56.0
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.7e-19 99.4 100 56.0
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 1.7e-19 99.4 100 56.0
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 1.7e-19 99.4 100 56.0
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 1.7e-19 99.4 100 56.0
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 2.2e-19 99.0 100 56.0
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 3.8e-19 98.2 99 55.6
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 4.9e-19 97.8 95 54.7
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 4.9e-19 97.8 95 54.7
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 1.1e-18 96.7 98 54.1
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 1.4e-18 96.3 89 57.3
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 1.9e-18 95.9 95 53.7
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 1.8e-16 89.4 121 47.9
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 1.9e-15 85.9 99 54.5
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 2.5e-15 85.5 85 56.5
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 6.2e-14 80.9 74 60.8
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 6.9e-13 77.4 52 73.1
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 1.1e-10 70.1 48 68.8
Lalb_Chr22g0353791 Lupinus albus HOM05D003517 ORTHO05D009798 4.6e-09 64.7 36 83.3
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 6.0e-09 64.3 34 85.3
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 8.7e-08 60.5 36 77.8
Nitab4.5_0006196g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 9.6e-07 57.0 64 48.4
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 6.2e-06 54.3 86 39.5


User provided reference genes

Program Settings