Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g013745.1 Solanum lycopersicum HOM05D000147 ORTHO05D033978 8.4e-76 287.0 147 100.0
Sopen11g008620 Solanum pennellii HOM05D000147 ORTHO05D004360 1.4e-62 243.0 149 87.2
Sopen11g008690 Solanum pennellii HOM05D000147 ORTHO05D004360 1.3e-60 236.5 131 92.4
Solyc11g013633.1 Solanum lycopersicum HOM05D000147 ORTHO05D033978 4.1e-54 214.9 123 88.6
Solyc12g040520.2 Solanum lycopersicum HOM05D000147 ORTHO05D004360 7.5e-32 141.0 135 60.0
Sopen11g022070 Solanum pennellii HOM05D000147 ORTHO05D004360 2.0e-29 132.9 129 58.9
Sopen10g012360 Solanum pennellii HOM05D000147 ORTHO05D004360 7.7e-29 131.0 125 58.4
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 4.8e-23 111.7 100 54.0
Solyc11g050880.2 Solanum lycopersicum HOM05D000147 ORTHO05D004360 7.5e-16 87.8 57 73.7
Nitab4.5_0001562g0010 Nicotiana tabacum HOM05D000147 ORTHO05D004360 1.6e-13 80.1 81 46.9
Nitab4.5_0007446g0020 Nicotiana tabacum HOM05D000147 ORTHO05D004360 1.6e-13 80.1 81 48.1
Solyc10g019190.2 Solanum lycopersicum HOM05D000147 ORTHO05D004360 1.3e-12 77.0 91 51.6
Peaxi162Scf00207g00838 Petunia axillaris HOM05D000147 ORTHO05D004360 4.3e-11 72.0 74 48.6
Lsat_1_v5_gn_5_26081 Lactuca sativa HOM05D003747 ORTHO05D005080 1.1e-06 57.4 89 31.5
Aa31LG1G19600 Aethionema arabicum HOM05D003747 ORTHO05D005080 2.4e-06 56.2 91 29.7
TAR376G0166 Trochodendron aralioides HOM05D003747 ORTHO05D005080 2.4e-06 56.2 91 30.8
ECA246G3046 Erigeron canadensis HOM05D003747 ORTHO05D005080 3.2e-06 55.8 91 29.7
Migut.N03134 Erythranthe guttata HOM05D003747 ORTHO05D005080 3.2e-06 55.8 103 29.1
CAN.G851.8 Capsicum annuum HOM05D003747 ORTHO05D005080 4.1e-06 55.5 91 29.7
Solyc11g013700.2 Solanum lycopersicum HOM05D000147 ORTHO05D004360 4.1e-06 55.5 35 91.4
EL10Ac1g00554 Beta vulgaris HOM05D003747 ORTHO05D005080 5.4e-06 55.1 89 31.5
CDE10G1342 Ceratophyllum demersum HOM05D003747 ORTHO05D005080 5.4e-06 55.1 96 29.2
Haze_22585 Corylus avellana HOM05D003747 ORTHO05D005080 5.4e-06 55.1 91 29.7
Manes.05G152300 Manihot esculenta HOM05D003747 ORTHO05D005080 5.4e-06 55.1 91 30.8
Peaxi162Scf00287g00127 Petunia axillaris HOM05D003747 ORTHO05D005080 5.4e-06 55.1 91 29.7
Cfa013905 Carpinus fangiana HOM05D003747 ORTHO05D005080 7.0e-06 54.7 91 29.7
CiPaw.07G154200 Carya illinoinensis HOM05D003747 ORTHO05D005080 7.0e-06 54.7 106 28.3
Nn5g29219 Nelumbo nucifera HOM05D003747 ORTHO05D005080 7.0e-06 54.7 92 32.6
Nn6g32245 Nelumbo nucifera HOM05D003747 ORTHO05D005080 7.0e-06 54.7 88 31.8
Potri.005G234900 Populus trichocarpa HOM05D003747 ORTHO05D005080 9.2e-06 54.3 91 28.6
SGA_v2.0_scaffold326G48749 Striga asiatica HOM05D003747 ORTHO05D005080 9.2e-06 54.3 98 28.6


User provided reference genes

Program Settings