Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007810.3 Solanum lycopersicum HOM05D004569 ORTHO05D005333 1.7e-41 172.6 106 100.0
Sopen11g003670 Solanum pennellii HOM05D004569 ORTHO05D005333 4.9e-41 171.0 106 99.1
PGSC0003DMG400027326 Solanum tuberosum HOM05D004569 ORTHO05D005333 6.8e-27 124.0 106 80.2
Nitab4.5_0004412g0030 Nicotiana tabacum HOM05D004569 ORTHO05D005333 4.7e-20 101.3 100 59.0
Peaxi162Scf00192g01617 Petunia axillaris HOM05D004569 ORTHO05D005333 5.2e-19 97.8 72 70.8
Nitab4.5_0004743g0130 Nicotiana tabacum HOM05D004569 ORTHO05D005333 2.0e-18 95.9 97 58.8
Nitab4.5_0000321g0230 Nicotiana tabacum HOM05D004569 ORTHO05D005333 9.8e-18 93.6 102 56.9
CAN.G135.33 Capsicum annuum HOM05D004569 ORTHO05D005333 4.1e-16 88.2 74 64.9
Peaxi162Scf00904g00217 Petunia axillaris HOM05D004569 ORTHO05D005333 8.6e-14 80.5 72 63.9
TAR636G3114 Trochodendron aralioides HOM05D004569 ORTHO05D005333 2.0e-10 69.3 72 55.6
TAR365G0299 Trochodendron aralioides HOM05D004569 ORTHO05D005333 2.6e-10 68.9 72 54.2
CSS0049273 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 7.6e-10 67.4 74 47.3
Hma1.2p1_0549F.1_g176970 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 1.7e-09 66.2 95 42.1
Oeu058961.1 Olea europaea HOM05D004569 ORTHO05D005333 2.2e-09 65.9 80 43.8
CSS0021073 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 2.9e-09 65.5 70 51.4
Dinv07545 Davidia involucrata HOM05D004569 ORTHO05D005333 3.8e-09 65.1 74 48.6
CANSAT78G0168 Cannabis sativa HOM05D004569 ORTHO05D005333 2.4e-08 62.4 72 50.0
Rhsim01G0189100 Rhododendron simsii HOM05D004569 ORTHO05D005333 3.2e-08 62.0 74 45.9
COL.COLO4_21559 Corchorus olitorius HOM05D004569 ORTHO05D005333 7.1e-08 60.8 72 44.4
CSS0011446 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 9.2e-08 60.5 74 43.2
Rhsim04G0197700 Rhododendron simsii HOM05D004569 ORTHO05D005333 1.6e-07 59.7 74 43.2
Sc19g0003960 Simmondsia chinensis HOM05D004569 ORTHO05D005333 2.1e-07 59.3 73 43.8
Nn1g01867 Nelumbo nucifera HOM05D004569 ORTHO05D005333 2.7e-07 58.9 76 51.3
Thecc.04G238000 Theobroma cacao HOM05D004569 ORTHO05D005333 7.8e-07 57.4 72 43.1
CiPaw.01G195800 Carya illinoinensis HOM05D004569 ORTHO05D005333 1.7e-06 56.2 57 52.6
ECA246G0155 Erigeron canadensis HOM05D004569 ORTHO05D005333 1.7e-06 56.2 56 51.8
Duzib052G0452 Durio zibethinus HOM05D004569 ORTHO05D005333 5.1e-06 54.7 67 44.8
Haze_03750 Corylus avellana HOM05D004569 ORTHO05D005333 6.6e-06 54.3 57 52.6


User provided reference genes

Program Settings