Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 4.8e-244 847.4 439 100.0
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 1.5e-240 835.9 439 98.6
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 5.3e-235 817.4 439 95.7
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 6.2e-207 724.2 445 86.5
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 8.3e-204 713.8 445 84.3
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 2.7e-202 708.8 451 82.9
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 4.3e-192 674.9 453 79.7
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 9.1e-142 507.7 438 62.1
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 6.5e-140 501.5 372 70.7
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 5.7e-136 488.4 383 67.9
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 1.7e-135 486.9 425 64.0
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 6.3e-135 485.0 373 67.6
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 5.3e-134 481.9 409 63.6
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.6e-133 479.6 369 68.6
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 2.6e-133 479.6 374 67.1
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 3.5e-133 479.2 344 71.2
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.7e-132 476.9 369 68.0
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 6.5e-132 474.9 374 67.6
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 6.5e-132 474.9 369 68.0
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 1.1e-131 474.2 376 68.1
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 1.5e-131 473.8 443 58.0
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 4.2e-131 472.2 450 58.7
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 9.4e-131 471.1 378 65.6
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 1.0e-129 467.6 376 64.6
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 3.0e-129 466.1 382 64.1
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 5.2e-129 465.3 379 64.4
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 1.1e-128 464.2 380 63.4
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 7.4e-128 461.5 432 60.6
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 1.7e-127 460.3 372 64.8
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 4.8e-127 458.8 425 59.8
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 8.2e-127 458.0 376 63.3
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 2.4e-126 456.4 371 64.7
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 7.0e-126 454.9 344 68.9
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.6e-125 453.0 417 58.8
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 3.5e-125 452.6 402 61.2
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 3.5e-125 452.6 372 64.0
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 1.0e-124 451.1 398 61.1
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 1.3e-124 450.7 481 54.1
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 1.7e-124 450.3 347 66.0
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 1.7e-124 450.3 438 58.0
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 2.9e-124 449.5 426 58.7
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 5.0e-124 448.7 412 59.7
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 1.1e-123 447.6 437 56.8
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 1.1e-123 447.6 434 57.6
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 3.0e-121 439.5 433 58.0
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 6.8e-121 438.3 405 57.3
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 1.5e-120 437.2 335 66.3
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 1.5e-120 437.2 362 66.0
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 2.0e-120 436.8 380 62.6
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 2.6e-120 436.4 445 56.2
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 9.7e-120 434.5 424 57.5
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 1.7e-119 433.7 389 60.4
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 1.7e-119 433.7 380 61.8
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 1.7e-119 433.7 380 61.8
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 2.2e-119 433.3 345 66.4
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 4.1e-118 429.1 349 64.8
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 7.0e-118 428.3 412 57.3
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 9.1e-118 427.9 443 56.7
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 9.1e-118 427.9 384 61.2
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 2.0e-117 426.8 405 57.3
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 2.0e-117 426.8 349 63.6
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 5.9e-117 425.2 343 65.9
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 7.7e-117 424.9 338 66.0
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 1.0e-116 424.5 378 61.6
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 8.5e-116 421.4 386 60.4
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 2.5e-115 419.9 409 56.0
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 3.2e-115 419.5 414 54.8
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 5.5e-115 418.7 354 61.0
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 9.4e-115 417.9 385 59.7
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.6e-114 417.2 386 58.0
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 4.7e-114 415.6 354 60.7
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 6.1e-114 415.2 387 58.7
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 6.8e-113 411.8 416 56.0
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 1.5e-112 410.6 371 60.4
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 4.4e-112 409.1 380 57.6
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 4.4e-112 409.1 349 62.5
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 7.5e-112 408.3 381 58.8
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 9.8e-112 407.9 370 59.5
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 1.3e-111 407.5 369 58.8
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 2.2e-111 406.8 380 57.4
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 3.7e-111 406.0 376 57.2
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 1.1e-110 404.4 376 58.2
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 7.0e-110 401.7 419 53.2
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 2.0e-109 400.2 353 60.1
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 1.7e-108 397.1 419 54.2
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 3.8e-108 396.0 389 56.0
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 8.6e-108 394.8 314 66.9
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 1.1e-107 394.4 353 58.9
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 3.3e-107 392.9 377 56.5
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 2.8e-106 389.8 354 58.8
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 5.7e-104 382.1 341 58.4
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 6.1e-98 362.1 299 63.5
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 3.9e-92 342.8 381 53.5
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 1.8e-89 334.0 406 50.0
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 9.8e-88 328.2 406 46.3
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.7e-87 327.4 239 69.9
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 1.5e-83 314.3 360 48.9
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 6.2e-82 308.9 232 71.6
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 7.6e-80 302.0 269 60.2
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.2e-77 294.7 213 71.8
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 6.6e-76 288.9 207 72.5
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 8.1e-66 255.4 210 65.7
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 7.6e-64 248.8 349 43.0
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 2.7e-61 240.4 371 39.1
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 1.0e-60 238.4 366 41.0
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.5e-59 234.6 220 55.0
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 2.6e-56 223.8 351 41.3
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 3.4e-56 223.4 214 57.9
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 6.9e-33 146.0 213 45.1
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.1e-25 122.1 320 32.2
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 2.0e-24 117.9 91 65.9
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 1.3e-23 115.2 102 57.8
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 3.8e-23 113.6 93 61.3
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 7.0e-17 92.8 100 51.0
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.2e-16 92.0 157 43.3
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.9e-14 84.7 122 42.6
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 4.2e-14 83.6 355 27.3
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 9.4e-14 82.4 352 26.7
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 3.3e-11 73.9 120 40.8


User provided reference genes

Program Settings