Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 1.5e-195 686.0 358 100.0
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 7.0e-193 677.2 358 98.9
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 4.0e-180 634.8 383 89.3
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 2.0e-171 605.9 359 90.0
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.4e-163 578.6 382 81.7
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.4e-140 503.4 424 67.9
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 2.0e-131 473.0 364 73.4
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 2.6e-131 472.6 334 76.0
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 5.9e-131 471.5 385 68.3
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 1.3e-130 470.3 379 67.5
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.2e-130 469.5 387 69.5
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 3.6e-128 462.2 361 70.1
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 3.6e-128 462.2 320 76.6
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 1.0e-127 460.7 402 65.4
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 1.0e-127 460.7 381 67.5
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 1.0e-127 460.7 316 78.2
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 3.9e-127 458.8 355 71.8
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 5.1e-127 458.4 388 67.3
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 6.7e-127 458.0 371 67.9
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 2.0e-126 456.4 404 66.8
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 5.7e-126 454.9 352 70.5
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 7.4e-126 454.5 387 66.7
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 4.8e-125 451.8 390 66.2
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 1.8e-124 449.9 273 84.6
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 2.4e-124 449.5 385 66.2
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 3.1e-124 449.1 369 67.8
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 9.1e-124 447.6 381 65.4
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 9.1e-124 447.6 370 67.8
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 9.1e-124 447.6 381 65.9
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 1.2e-123 447.2 369 67.8
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.2e-123 447.2 370 67.8
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.5e-123 446.8 278 83.5
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 2.6e-123 446.0 270 84.8
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 4.5e-123 445.3 370 67.3
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 5.9e-123 444.9 357 67.8
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 5.9e-123 444.9 369 67.8
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 2.2e-122 443.0 377 65.0
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 3.8e-122 442.2 370 66.2
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 3.8e-122 442.2 283 82.3
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 3.8e-122 442.2 409 61.6
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 5.0e-122 441.8 377 65.0
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 5.0e-122 441.8 274 83.2
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 5.0e-122 441.8 296 78.0
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 6.5e-122 441.4 384 65.4
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 8.5e-122 441.0 386 64.5
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.1e-121 440.7 270 83.7
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.1e-121 440.7 270 83.7
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.1e-121 440.7 373 67.8
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 1.4e-121 440.3 392 63.3
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 4.2e-121 438.7 380 66.1
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 4.2e-121 438.7 380 66.1
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 5.5e-121 438.3 326 71.5
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 7.2e-121 438.0 373 67.6
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 1.2e-120 437.2 290 79.0
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 3.6e-120 435.6 326 70.9
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 4.7e-120 435.3 399 63.4
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 6.1e-120 434.9 279 80.3
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 1.0e-119 434.1 281 79.4
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 1.4e-119 433.7 274 81.8
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.4e-119 433.7 362 66.9
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 5.2e-119 431.8 369 65.9
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 2.0e-118 429.9 272 81.6
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 2.6e-118 429.5 381 62.5
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 2.6e-118 429.5 389 66.6
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 4.4e-118 428.7 288 77.8
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 4.4e-118 428.7 381 63.5
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 1.3e-117 427.2 367 64.9
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 2.2e-117 426.4 368 63.6
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 6.3e-117 424.9 367 66.2
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 6.3e-117 424.9 360 65.8
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 1.8e-116 423.3 308 73.1
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.1e-116 422.2 259 83.8
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 5.3e-116 421.8 369 66.1
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 5.3e-116 421.8 368 65.5
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 5.3e-116 421.8 364 64.3
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.6e-115 420.2 376 64.9
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 5.9e-115 418.3 286 76.6
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 3.8e-114 415.6 286 76.6
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 1.5e-113 413.7 247 85.8
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 7.2e-113 411.4 390 62.3
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 9.4e-113 411.0 366 64.5
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 3.7e-109 399.1 329 68.4
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 3.7e-109 399.1 268 76.5
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 3.7e-109 399.1 281 72.6
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.1e-108 397.5 268 76.1
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 1.4e-108 397.1 269 74.7
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 1.6e-107 393.7 371 60.6
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 1.0e-106 391.0 295 72.5
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 1.1e-105 387.5 262 80.5
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 1.5e-105 387.1 279 72.0
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 5.5e-105 385.2 285 73.3
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 5.9e-99 365.2 290 70.7
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 2.3e-98 363.2 393 56.5
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 3.8e-98 362.5 335 60.3
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 6.5e-98 361.7 410 52.9
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 4.2e-97 359.0 415 51.8
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 4.2e-97 359.0 269 69.5
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 7.5e-94 348.2 268 67.9
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 4.5e-91 339.0 268 64.2
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.3e-90 337.4 206 83.0
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 1.7e-90 337.0 344 58.1
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.1e-89 334.3 215 80.0
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 3.0e-87 326.2 229 73.8
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 6.8e-87 325.1 323 61.6
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 3.7e-85 319.3 177 93.8
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 1.0e-82 311.2 295 62.4
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 4.4e-78 295.8 424 48.8
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 5.8e-78 295.4 271 56.5
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 2.2e-77 293.5 299 58.5
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 2.4e-76 290.0 263 57.0
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 1.5e-70 270.8 187 73.3
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 4.4e-70 269.2 291 54.0
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 5.8e-70 268.9 259 56.4
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 1.7e-66 257.3 157 84.7
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 8.1e-64 248.4 327 47.4
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 4.4e-62 242.7 258 53.9
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.9e-57 227.3 256 54.3
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.8e-56 223.4 129 87.6
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 1.9e-52 210.7 130 83.8
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 7.8e-51 205.3 136 77.2
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 2.8e-48 196.8 123 85.4
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 3.9e-42 176.4 108 79.6
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 9.0e-39 165.2 253 37.5
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 8.4e-29 132.1 179 43.6
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 5.1e-26 122.9 145 55.9
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 8.7e-26 122.1 187 38.5
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 1.3e-24 118.2 90 68.9
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.1e-12 78.6 150 40.0
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 1.9e-12 77.8 41 97.6
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 1.8e-10 71.2 66 65.2
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 6.7e-10 69.3 245 24.1
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 7.4e-09 65.9 36 88.9
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 4.1e-07 60.1 51 58.8


User provided reference genes

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