Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 0.0e+00 1269.2 673 100.0
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 0.0e+00 1263.1 673 99.1
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 0.0e+00 1236.1 673 97.5
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 0.0e+00 1177.5 674 93.2
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 0.0e+00 1154.0 676 90.8
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 0.0e+00 1149.4 674 89.5
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 0.0e+00 1124.4 674 88.1
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 0.0e+00 1110.5 678 88.1
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.9e-295 1018.8 675 82.4
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 1.5e-284 982.6 682 78.4
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 3.4e-257 891.7 734 71.7
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 5.5e-247 857.8 681 72.7
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 3.3e-244 848.6 694 70.0
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 9.7e-244 847.0 699 66.0
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 1.1e-239 833.6 692 70.8
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 3.3e-236 822.0 703 64.7
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 4.3e-236 821.6 718 65.6
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 3.7e-235 818.5 686 68.5
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 5.3e-234 814.7 709 69.0
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 5.0e-232 808.1 688 65.7
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 1.1e-231 807.0 689 69.8
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 9.4e-231 803.9 693 69.7
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 6.1e-230 801.2 691 69.6
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 2.6e-228 795.8 694 67.9
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 5.7e-228 794.7 679 66.7
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 7.4e-228 794.3 695 65.6
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 8.2e-227 790.8 695 63.7
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 2.4e-226 789.3 697 66.1
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 5.9e-225 784.6 694 65.1
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 2.6e-220 769.2 696 62.9
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 3.3e-220 768.8 692 63.3
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 4.4e-220 768.5 699 61.7
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 1.1e-218 763.8 695 64.9
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 1.1e-218 763.8 699 62.2
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 2.2e-216 756.1 688 65.6
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 8.5e-216 754.2 700 62.0
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 1.1e-215 753.8 711 60.2
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 4.2e-215 751.9 698 60.3
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 7.2e-215 751.1 679 65.7
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 2.1e-214 749.6 694 60.2
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 4.7e-214 748.4 700 61.7
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 4.7e-214 748.4 712 60.5
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 1.4e-210 736.9 717 59.1
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 2.4e-210 736.1 713 59.5
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 5.3e-210 734.9 681 62.0
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 2.2e-208 729.6 721 58.8
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 8.5e-208 727.6 697 59.8
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 8.5e-208 727.6 716 58.8
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 9.4e-207 724.2 677 61.9
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 4.7e-206 721.8 695 63.6
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 1.0e-205 720.7 714 58.5
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 1.4e-205 720.3 687 59.5
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 1.8e-205 719.9 695 61.9
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 4.0e-205 718.8 705 58.7
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 1.5e-204 716.8 702 58.8
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 2.0e-204 716.5 681 61.5
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 4.4e-204 715.3 696 58.9
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 9.1e-202 707.6 712 59.8
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 2.3e-200 703.0 695 58.4
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 1.5e-199 700.3 641 61.3
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 1.9e-199 699.9 681 63.9
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 2.5e-199 699.5 711 58.2
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 5.5e-199 698.4 709 57.5
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 2.1e-198 696.4 684 61.4
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 1.5e-196 690.3 711 60.9
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 9.8e-196 687.6 703 57.8
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 1.2e-193 680.6 708 57.2
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 1.2e-193 680.6 682 62.3
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 2.9e-192 676.0 742 55.3
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 3.9e-192 675.6 689 61.5
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 6.6e-192 674.9 695 59.7
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 1.9e-191 673.3 689 62.6
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.6e-190 670.2 696 56.8
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 2.8e-190 669.5 658 62.2
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 4.7e-190 668.7 703 55.9
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 6.1e-190 668.3 691 57.5
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 8.0e-190 667.9 713 60.7
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 1.4e-189 667.2 706 57.2
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 4.0e-189 665.6 695 56.5
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 4.0e-189 665.6 691 56.2
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 8.9e-189 664.5 681 61.4
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 2.6e-188 662.9 706 56.5
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 3.4e-188 662.5 600 60.8
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 2.9e-187 659.4 691 60.1
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 6.0e-185 651.7 689 58.6
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 3.1e-181 639.4 685 56.6
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 1.2e-180 637.5 705 53.6
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 1.5e-180 637.1 689 55.0
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 1.5e-180 637.1 689 55.0
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 4.1e-178 629.0 702 55.8
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 5.4e-178 628.6 513 63.7
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 2.1e-177 626.7 705 54.9
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 2.3e-176 623.2 689 54.6
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 3.3e-175 619.4 707 52.6
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 1.2e-166 590.9 548 61.7
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 4.7e-166 589.0 634 57.6
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 3.1e-165 586.3 552 58.3
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 2.0e-164 583.6 555 59.1
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 9.9e-164 581.3 557 59.4
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 2.9e-163 579.7 730 50.0
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 2.5e-159 566.6 720 51.4
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 4.9e-155 552.4 559 58.3
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 8.4e-155 551.6 522 59.6
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 4.3e-151 539.3 528 58.7
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 1.3e-150 537.7 549 55.9
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 1.4e-146 524.2 484 61.0
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 8.7e-144 515.0 595 52.4
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 1.1e-143 514.6 581 52.3
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 3.3e-143 513.1 424 72.9
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 3.5e-137 493.0 689 47.2
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 1.6e-121 441.0 349 65.9
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 1.3e-115 421.4 387 58.7
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 2.0e-111 407.5 327 67.6
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 4.1e-109 399.8 317 67.2
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 7.0e-109 399.1 550 44.9
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 8.8e-104 382.1 326 64.1
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 2.8e-102 377.1 351 62.1
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 1.6e-100 371.3 348 64.4
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 1.7e-91 341.3 803 33.4
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 1.5e-90 338.2 775 32.8
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 6.3e-86 322.8 365 51.2
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 6.6e-75 286.2 370 49.5
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 5.6e-66 256.5 298 51.3
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 4.7e-65 253.4 410 42.2
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 2.1e-60 238.0 365 46.8
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 2.1e-60 238.0 280 51.1
SHI01951 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-58 231.1 327 49.2
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 3.0e-51 207.6 125 83.2
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 1.6e-49 201.8 177 61.6
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 6.2e-49 199.9 143 72.0
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 9.6e-42 176.0 208 52.9
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 9.6e-42 176.0 269 40.9
CDE06G0583 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.1e-40 172.6 184 46.2
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 3.6e-33 147.5 137 59.9
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 1.9e-29 135.2 134 56.0
PGSC0003DMG400027627 Solanum tuberosum HOM05D005511 ORTHO05D006616 3.1e-24 117.9 78 69.2
Cre04.g222300 Chlamydomonas reinhardtii HOM05D005511 ORTHO05D006616 2.6e-23 114.8 399 26.1
Actinidia02692 Actinidia chinensis HOM05D005511 ORTHO05D006616 4.9e-22 110.5 79 77.2
Sc03g0008960 Simmondsia chinensis HOM05D005511 ORTHO05D006616 5.0e-14 84.0 143 60.8
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 8.5e-06 56.6 47 55.3


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