Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 1.5e-89 332.8 166 100.0
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 4.4e-89 331.3 166 99.4
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 6.6e-85 317.4 166 95.2
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 5.6e-76 287.7 165 86.1
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 7.3e-76 287.3 165 86.1
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 8.3e-72 273.9 165 81.8
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 1.4e-66 256.5 175 74.3
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 1.3e-64 250.0 162 72.8
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 1.4e-63 246.5 165 72.1
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 9.2e-63 243.8 162 71.0
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 1.2e-62 243.4 163 71.8
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 4.6e-62 241.5 162 71.0
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 7.8e-62 240.7 162 71.6
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 1.0e-61 240.4 163 67.5
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 1.7e-61 239.6 162 70.4
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 3.0e-61 238.8 162 69.1
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 3.0e-61 238.8 165 70.9
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 3.9e-61 238.4 163 70.6
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 3.9e-61 238.4 163 70.6
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 8.6e-61 237.3 163 70.6
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 8.6e-61 237.3 163 70.6
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 2.1e-59 232.6 163 68.7
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 3.6e-59 231.9 163 69.9
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 2.4e-58 229.2 162 67.3
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 3.1e-58 228.8 162 67.3
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 8.9e-58 227.3 163 68.7
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 2.6e-57 225.7 163 66.9
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 2.6e-57 225.7 162 66.7
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 3.4e-57 225.3 163 66.9
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 9.9e-57 223.8 163 67.5
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 2.2e-56 222.6 164 65.9
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 3.8e-56 221.9 162 64.2
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 6.4e-56 221.1 163 63.8
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 8.4e-56 220.7 163 65.0
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 1.4e-55 219.9 198 54.5
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 1.9e-55 219.5 163 65.6
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 3.2e-55 218.8 163 65.6
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 3.2e-55 218.8 163 65.6
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 1.2e-54 216.9 154 68.8
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 1.2e-54 216.9 154 68.8
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 1.6e-54 216.5 163 63.8
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 1.6e-54 216.5 161 66.5
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 4.6e-54 214.9 163 64.4
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 1.7e-53 213.0 162 62.3
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 2.3e-53 212.6 163 62.0
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 5.1e-53 211.5 164 62.8
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 1.1e-52 210.3 154 66.2
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 1.5e-52 209.9 164 64.0
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 9.6e-52 207.2 154 64.9
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 2.8e-51 205.7 150 65.3
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 2.8e-51 205.7 163 60.7
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 8.1e-51 204.1 175 60.0
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.8e-50 203.0 166 60.8
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 1.5e-49 199.9 164 61.6
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 2.6e-49 199.1 163 60.1
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 3.4e-49 198.7 163 58.9
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 4.4e-49 198.4 162 59.9
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 4.4e-49 198.4 162 60.5
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 4.4e-49 198.4 162 62.3
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 2.2e-48 196.1 163 58.9
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 2.9e-48 195.7 164 61.6
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 2.4e-47 192.6 164 57.3
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 2.4e-47 192.6 164 59.8
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 5.4e-47 191.4 162 56.2
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 1.2e-46 190.3 163 58.9
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 1.2e-46 190.3 164 55.5
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 2.1e-46 189.5 164 55.5
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 2.7e-46 189.1 162 58.6
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 2.7e-46 189.1 164 57.3
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 3.5e-46 188.7 154 59.7
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 7.8e-46 187.6 162 59.9
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 1.3e-45 186.8 123 71.5
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 3.9e-45 185.3 164 58.5
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 5.1e-45 184.9 162 56.2
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 6.6e-45 184.5 162 56.8
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 6.6e-45 184.5 162 56.8
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 6.6e-45 184.5 162 56.8
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 8.7e-45 184.1 163 57.7
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 8.7e-45 184.1 162 56.8
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 8.7e-45 184.1 162 56.8
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 1.5e-44 183.3 162 56.8
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 2.5e-44 182.6 162 57.4
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 2.5e-44 182.6 162 54.9
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 3.3e-44 182.2 161 59.0
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 1.3e-43 180.3 163 55.8
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 1.3e-43 180.3 163 55.8
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 2.1e-43 179.5 162 55.6
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 6.2e-43 177.9 162 54.9
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 9.0e-42 174.1 165 55.2
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 9.0e-42 174.1 165 55.2
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 9.0e-42 174.1 165 55.2
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 9.9e-41 170.6 165 55.2
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 2.2e-40 169.5 124 66.1
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 4.9e-40 168.3 168 51.8
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.9e-39 166.4 152 58.6
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 1.3e-37 160.2 113 67.3
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 5.6e-36 154.8 165 46.7
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 1.8e-34 149.8 164 51.2
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 2.6e-33 146.0 179 45.8
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.0e-32 144.1 162 43.2
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 2.9e-32 142.5 179 45.8
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 3.3e-28 129.0 165 44.8
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 3.7e-27 125.6 173 39.9
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 9.0e-26 120.9 177 42.4
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 4.5e-25 118.6 177 42.9
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 5.5e-23 111.7 128 50.0
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 2.7e-22 109.4 175 38.3
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 7.9e-22 107.8 101 51.5
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 2.3e-21 106.3 165 41.8
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 3.0e-21 105.9 114 50.0
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-20 103.6 177 35.0
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-19 100.1 185 36.2
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 2.2e-19 99.8 70 70.0
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 2.8e-19 99.4 178 32.0
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 4.8e-19 98.6 175 38.9
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 1.1e-18 97.4 159 35.8
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 2.4e-18 96.3 68 63.2
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 3.1e-18 95.9 170 35.9
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-17 93.6 165 33.9
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.5e-17 93.6 164 32.3
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 7.7e-17 91.3 144 35.4
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-16 90.5 136 39.7
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 2.9e-16 89.4 75 58.7
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 5.0e-16 88.6 174 32.8
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 5.0e-16 88.6 108 50.0
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 1.9e-15 86.7 71 62.0
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 1.0e-13 80.9 126 38.1
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.4e-13 80.5 109 40.4
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 3.9e-13 79.0 156 34.0
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 8.8e-13 77.8 153 28.8
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 2.5e-12 76.3 176 31.8
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 3.3e-12 75.9 172 26.7
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 9.7e-12 74.3 173 29.5
Atru.chr4.1970 Acer truncatum HOM05D004737 ORTHO05D005623 2.2e-11 73.2 172 26.7
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 2.8e-11 72.8 181 29.3
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 3.7e-11 72.4 164 26.8
Atru.chr3.997 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-10 70.9 176 30.7
Atru.chr7.1970 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-10 70.9 146 32.2
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 9.1e-10 67.8 111 39.6
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 2.0e-09 66.6 113 37.2
Atru.chr1.4012 Acer truncatum HOM05D004737 ORTHO05D005623 4.5e-09 65.5 145 29.7
Atru.chr5.3478 Acer truncatum HOM05D004737 ORTHO05D005623 7.7e-09 64.7 126 31.7
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 1.0e-08 64.3 166 27.7
QL12p033469 Quercus lobata HOM05D004737 ORTHO05D005623 1.0e-08 64.3 39 74.4
Atru.chr12.1688 Acer truncatum HOM05D004737 ORTHO05D005623 8.5e-08 61.2 131 29.8
Atru.chr12.1697 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-06 57.0 158 25.3
Atru.chr6.94 Acer truncatum HOM05D004737 ORTHO05D005623 6.1e-06 55.1 64 48.4


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