Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g074600.3 Solanum lycopersicum HOM05D001620 ORTHO05D005461 1.3e-85 319.7 167 100.0
Sopen10g027090 Solanum pennellii HOM05D001620 ORTHO05D005461 1.1e-63 246.9 136 94.1
CAN.G234.1 Capsicum annuum HOM05D001620 ORTHO05D005461 5.5e-55 218.0 128 85.9
Nitab4.5_0008172g0010 Nicotiana tabacum HOM05D001620 ORTHO05D005461 6.0e-54 214.5 136 81.6
Peaxi162Scf00374g00732 Petunia axillaris HOM05D001620 ORTHO05D005461 6.7e-53 211.1 129 83.7
Nitab4.5_0001700g0020 Nicotiana tabacum HOM05D001620 ORTHO05D005461 6.9e-50 201.1 138 76.1
PGSC0003DMG400016831 Solanum tuberosum HOM05D001620 ORTHO05D005461 6.3e-43 177.9 98 92.9
Cc00_g29970 Coffea canephora HOM05D001620 ORTHO05D005461 1.4e-37 160.2 129 65.1
Lj5P170T30 Lonicera japonica HOM05D001620 ORTHO05D005461 2.3e-37 159.5 128 64.8
Actinidia17986 Actinidia chinensis HOM05D001620 ORTHO05D005461 8.8e-37 157.5 128 62.5
Dinv14184 Davidia involucrata HOM05D001620 ORTHO05D005461 3.7e-35 152.1 128 60.2
TAR376G0870 Trochodendron aralioides HOM05D001620 ORTHO05D005461 2.6e-33 146.0 128 56.2
QL11p056803 Quercus lobata HOM05D001620 ORTHO05D005461 1.7e-32 143.3 134 54.5
SalBow1G8418 Salvia bowleyana HOM05D001620 ORTHO05D005461 2.2e-32 142.9 131 55.7
Prupe.8G182100 Prunus persica HOM05D001620 ORTHO05D005461 8.5e-32 141.0 128 52.3
MD10G1143100 Malus domestica HOM05D001620 ORTHO05D005461 3.2e-31 139.0 128 50.8
Migut.B00943 Erythranthe guttata HOM05D001620 ORTHO05D005461 7.2e-31 137.9 125 56.8
MSTRG.16958 Avicennia marina HOM05D001620 ORTHO05D005461 3.6e-30 135.6 121 56.2
Nn6g31636 Nelumbo nucifera HOM05D001620 ORTHO05D005461 3.6e-30 135.6 128 52.3
Rhsim07G0221500 Rhododendron simsii HOM05D001620 ORTHO05D005461 1.0e-29 134.0 127 55.1
Thecc.02G148000 Theobroma cacao HOM05D001620 ORTHO05D005461 1.0e-29 134.0 128 50.8
RcHm_v2.0_Chr6g0281221 Rosa chinensis HOM05D001620 ORTHO05D005461 5.1e-29 131.7 128 50.8
GSVIVG01023856001 Vitis vinifera HOM05D001620 ORTHO05D005461 6.7e-29 131.3 128 50.8
Cfa005393 Carpinus fangiana HOM05D001620 ORTHO05D005461 8.8e-29 131.0 135 51.9
DCAR_029911 Daucus carota HOM05D001620 ORTHO05D005461 8.8e-29 131.0 127 48.8
Gorai.005G216000 Gossypium raimondii HOM05D001620 ORTHO05D005461 1.1e-28 130.6 128 49.2
Haze_01957 Corylus avellana HOM05D001620 ORTHO05D005461 1.5e-28 130.2 128 53.1
Gohir.D02G193200 Gossypium hirsutum HOM05D001620 ORTHO05D005461 2.6e-28 129.4 128 48.4
CiPaw.05G094900 Carya illinoinensis HOM05D001620 ORTHO05D005461 4.4e-28 128.6 130 51.5
Eucgr.H05004 Eucalyptus grandis HOM05D001620 ORTHO05D005461 4.4e-28 128.6 128 50.0
FAN15G2752 Fragaria x ananassa HOM05D001620 ORTHO05D005461 4.4e-28 128.6 128 48.4
Lsat_1_v5_gn_4_71240 Lactuca sativa HOM05D001620 ORTHO05D005461 5.7e-28 128.3 129 50.4
Gohir.A03G170100 Gossypium hirsutum HOM05D001620 ORTHO05D005461 9.7e-28 127.5 128 48.4
CsaV3_7G002140 Cucumis sativus L. HOM05D001620 ORTHO05D005461 1.3e-27 127.1 128 49.2
Sed0027002 Sechium edule HOM05D001620 ORTHO05D005461 2.8e-27 125.9 128 47.7
Manes.15G113700 Manihot esculenta HOM05D001620 ORTHO05D005461 3.7e-27 125.6 129 49.6
ClCG02G003250 Citrullus lanatus HOM05D001620 ORTHO05D005461 4.8e-27 125.2 133 48.9
COL.COLO4_03849 Corchorus olitorius HOM05D001620 ORTHO05D005461 4.8e-27 125.2 128 46.9
FAN27G0152 Fragaria x ananassa HOM05D001620 ORTHO05D005461 4.8e-27 125.2 128 47.7
PSO541G2761 Papaver somniferum HOM05D001620 ORTHO05D005461 4.8e-27 125.2 133 47.4
Hma1.2p1_0619F.1_g190430 Hydrangea macrophylla HOM05D001620 ORTHO05D005461 8.2e-27 124.4 128 50.0
SGA_v2.0_scaffold104G30256 Striga asiatica HOM05D001620 ORTHO05D005461 8.2e-27 124.4 126 51.6
Ciclev10029031m.g Citrus clementina HOM05D001620 ORTHO05D005461 1.1e-26 124.0 129 47.3
MELO3C015694.2 Cucumis melo HOM05D001620 ORTHO05D005461 2.4e-26 122.9 128 47.7
Thhalv10012815m.g Eutrema salsugineum HOM05D003132 ORTHO05D003736 6.9e-26 121.3 128 46.9
PSO675G1501 Papaver somniferum HOM05D001620 ORTHO05D005461 1.5e-25 120.2 131 45.8
MBI01_g28400_MAGBIO Magnolia biondii HOM05D001620 ORTHO05D005461 2.0e-25 119.8 131 48.1
HanXRQChr03g0093541 Helianthus annuus HOM05D001620 ORTHO05D005461 1.7e-24 116.7 129 48.1
THA.LOC104800065 Tarenaya hassleriana HOM05D001620 ORTHO05D005461 2.9e-24 115.9 133 43.6
Sp6g34000 Schrenkiella parvula HOM05D001620 ORTHO05D005461 3.8e-24 115.5 131 43.5
C09p68030 Brassica napus HOM05D003132 ORTHO05D003736 8.5e-24 114.4 128 43.8
AT5G09315 Arabidopsis thaliana HOM05D001620 ORTHO05D005461 4.2e-23 112.1 128 42.2
BolC9t59562H Brassica oleracea HOM05D003132 ORTHO05D003736 5.5e-23 111.7 128 43.0
AL6G19720 Arabidopsis lyrata HOM05D001620 ORTHO05D005461 9.4e-23 110.9 128 41.4
Carub.0006s0787 Capsella rubella HOM05D003132 ORTHO05D003736 9.4e-23 110.9 131 41.2
BcaB08g37218 Brassica carinata HOM05D001620 ORTHO05D005461 1.6e-22 110.2 128 42.2
TWI79G0573 Tripterygium wilfordii HOM05D001620 ORTHO05D005461 3.6e-22 109.0 125 44.8
BraA10t44841Z Brassica rapa HOM05D003132 ORTHO05D003736 8.0e-22 107.8 128 41.4
Actinidia20585 Actinidia chinensis HOM05D001620 ORTHO05D005461 1.0e-21 107.5 91 60.4
CDE08G0732 Ceratophyllum demersum HOM05D001619 ORTHO05D001541 1.4e-21 107.1 133 42.9
Aqoxy6G02985 Aquilegia oxysepala HOM05D001620 ORTHO05D005461 3.0e-21 105.9 131 45.8
ATR0605G201 Amborella trichopoda HOM05D001620 ORTHO05D005461 3.9e-21 105.5 127 45.7
Os04g0475500 Oryza sativa ssp. japonica HOM05D001620 ORTHO05D005461 3.9e-21 105.5 127 48.0
Atru.chr5.3578 Acer truncatum HOM05D001620 ORTHO05D005461 8.8e-21 104.4 126 44.4
Oeu048110.1 Olea europaea HOM05D001620 ORTHO05D005461 8.8e-21 104.4 88 60.2
HPP92_015473 Vanilla planifolia HOM05D002051 ORTHO05D002041 1.5e-20 103.6 136 45.6
Sabra09G0131500 Salix brachista HOM05D001620 ORTHO05D005461 2.0e-20 103.2 132 44.7
Zm00001eb079800 Zea mays HOM05D001620 ORTHO05D005461 3.3e-20 102.4 135 48.1
CSS0013600 Camellia sinensis var. sinensis HOM05D001620 ORTHO05D005461 2.2e-19 99.8 84 58.3
ECA234G1622 Erigeron canadensis HOM05D000443 ORTHO05D006935 8.2e-19 97.8 106 50.9
Potri.009G169600 Populus trichocarpa HOM05D001620 ORTHO05D005461 1.8e-18 96.7 133 42.9
FvH4_2g17040 Fragaria vesca HOM05D001620 ORTHO05D005461 4.1e-18 95.5 128 39.8
FAN24G0497 Fragaria x ananassa HOM05D001620 ORTHO05D005461 4.1e-18 95.5 128 39.8
Sc18g0005700 Simmondsia chinensis HOM05D001620 ORTHO05D005461 7.0e-18 94.7 128 39.8
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 5.0e-16 88.6 110 39.1
Haze_01411 Corylus avellana HOM05D001620 ORTHO05D005461 9.4e-15 84.3 145 35.9
Dinv44168 Davidia involucrata HOM05D001620 ORTHO05D005461 2.7e-14 82.8 136 34.6
Haze_12936 Corylus avellana HOM05D001620 ORTHO05D005461 8.0e-14 81.3 129 36.4
Hund03188 Selenicereus undatus HOM05D001620 ORTHO05D005461 1.4e-13 80.5 132 34.1
Prupe.1G201600 Prunus persica HOM05D001620 ORTHO05D005461 1.8e-13 80.1 129 35.7
Sc19g0002780 Simmondsia chinensis HOM05D001620 ORTHO05D005461 4.0e-13 79.0 132 34.8
Potri.007G134300 Populus trichocarpa HOM05D001620 ORTHO05D005461 5.2e-13 78.6 131 32.1
Oeu015935.2 Olea europaea HOM05D001620 ORTHO05D005461 8.8e-13 77.8 127 34.6
SalBow6G2343 Salvia bowleyana HOM05D001620 ORTHO05D005461 2.0e-12 76.6 129 34.1
SEGI_37669 Sequoiadendron giganteum HOM05D001620 ORTHO05D005461 9.7e-12 74.3 129 31.8
MSTRG.22018 Avicennia marina HOM05D001620 ORTHO05D005461 2.8e-11 72.8 136 31.6
ClCG07G015080 Citrullus lanatus HOM05D001620 ORTHO05D005461 3.7e-11 72.4 129 32.6
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 1.1e-10 70.9 132 32.6
ATR0605G005 Amborella trichopoda HOM05D001620 ORTHO05D005461 2.4e-10 69.7 97 42.3
Ciclev10021852m.g Citrus clementina HOM05D001620 ORTHO05D005461 3.1e-10 69.3 134 31.3
Dinv25389 Davidia involucrata HOM05D001620 ORTHO05D005461 3.1e-10 69.3 110 33.6
SEGI_06390 Sequoiadendron giganteum HOM05D001620 ORTHO05D005461 7.0e-10 68.2 115 34.8
Lsat_1_v5_gn_3_109820 Lactuca sativa HOM05D001620 ORTHO05D005461 2.7e-09 66.2 132 28.8
CDE02G0743 Ceratophyllum demersum HOM05D001620 ORTHO05D005461 3.5e-09 65.9 127 33.1
Solyc11g045220.2 Solanum lycopersicum HOM05D001620 ORTHO05D005461 3.5e-09 65.9 137 30.7
Sopen11g020680 Solanum pennellii HOM05D001620 ORTHO05D005461 3.5e-09 65.9 137 30.7
PGSC0003DMG400022873 Solanum tuberosum HOM05D001620 ORTHO05D005461 3.5e-09 65.9 137 30.7
arahy.Tifrunner.gnm1.ann1.G0W8DL Arachis hypogaea HOM05D001620 ORTHO05D005461 3.8e-08 62.4 133 25.6
MBI14_g25895_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D009379 1.1e-07 60.8 113 31.9
MBI14_g37138_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D009379 1.9e-07 60.1 113 31.9
CANSAT25G0192 Cannabis sativa HOM05D001620 ORTHO05D005461 2.5e-07 59.7 62 40.3
Cc00_g03540 Coffea canephora HOM05D001620 ORTHO05D005461 4.2e-07 58.9 139 27.3
Cc03_g12150 Coffea canephora HOM05D001620 ORTHO05D005461 5.5e-07 58.5 118 29.7
COL.COLO4_28387 Corchorus olitorius HOM05D001620 ORTHO05D005461 5.5e-07 58.5 117 30.8
Thecc.04G171200 Theobroma cacao HOM05D001620 ORTHO05D005461 7.2e-07 58.2 134 26.9
CSS0003033 Camellia sinensis var. sinensis HOM05D002908 ORTHO05D009379 9.4e-07 57.8 120 32.5
Phvul.005G155600 Phaseolus vulgaris HOM05D001620 ORTHO05D005461 1.2e-06 57.4 140 26.4
Nitab4.5_0001481g0050 Nicotiana tabacum HOM05D001620 ORTHO05D005461 2.1e-06 56.6 127 30.7
ECA240G4634 Erigeron canadensis HOM05D001620 ORTHO05D005461 2.7e-06 56.2 100 31.0
CDE05G0493 Ceratophyllum demersum HOM05D002908 ORTHO05D009379 6.1e-06 55.1 121 30.6


User provided reference genes

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