Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g038100.1 Solanum lycopersicum HOM05D000943 ORTHO05D024933 6.3e-67 257.3 129 100.0
Nitab4.5_0000667g0060 Nicotiana tabacum HOM05D000943 ORTHO05D010024 4.4e-44 181.4 131 73.3
Nitab4.5_0002550g0030 Nicotiana tabacum HOM05D000943 ORTHO05D010024 1.6e-41 172.9 135 69.6
Peaxi162Scf02228g00005 Petunia axillaris HOM05D000943 ORTHO05D010024 4.5e-41 171.4 140 66.4
CAN.G284.3 Capsicum annuum HOM05D000943 ORTHO05D010024 2.5e-39 165.6 139 64.0
Peaxi162Scf00011g01123 Petunia axillaris HOM05D000943 ORTHO05D010024 3.7e-35 151.8 134 59.7
Nitab4.5_0007295g0040 Nicotiana tabacum HOM05D000943 ORTHO05D010024 6.3e-35 151.0 136 61.8
Nitab4.5_0000787g0260 Nicotiana tabacum HOM05D000943 ORTHO05D010024 2.4e-34 149.1 136 60.3
CAN.G2125.2 Capsicum annuum HOM05D000943 ORTHO05D010024 2.7e-33 145.6 136 59.6
Hma1.2p1_2174F.1_g316050 Hydrangea macrophylla HOM05D000943 ORTHO05D010024 2.7e-33 145.6 132 57.6
Sopen01g046020 Solanum pennellii HOM05D000943 ORTHO05D024933 6.5e-32 141.0 139 58.3
Dinv19403 Davidia involucrata HOM05D000943 ORTHO05D010024 1.5e-31 139.8 137 55.5
vmacro19866 Vaccinium macrocarpon HOM05D000943 ORTHO05D010024 4.2e-31 138.3 130 60.0
CSS0044087 Camellia sinensis var. sinensis HOM05D000943 ORTHO05D010024 1.8e-29 132.9 133 55.6
SGA_v2.0_scaffold42G15906 Striga asiatica HOM05D000943 ORTHO05D010024 6.8e-29 131.0 144 53.5
Rhsim04G0110500 Rhododendron simsii HOM05D000943 ORTHO05D010024 2.0e-28 129.4 134 56.7
Actinidia01604 Actinidia chinensis HOM05D000943 ORTHO05D010024 4.4e-28 128.3 137 50.4
PGR142G1561 Punica granatum HOM05D000943 ORTHO05D010024 5.7e-28 127.9 75 80.0
Duzib132G0520 Durio zibethinus HOM05D000943 ORTHO05D010024 9.8e-28 127.1 133 50.4
Gohir.A04G133500 Gossypium hirsutum HOM05D000943 ORTHO05D010024 9.8e-28 127.1 120 54.2
Migut.N00828 Erythranthe guttata HOM05D000943 ORTHO05D010024 1.3e-27 126.7 141 46.1
SalBow3G1699 Salvia bowleyana HOM05D000943 ORTHO05D010024 6.3e-27 124.4 131 48.9
Ciclev10001198m.g Citrus clementina HOM05D000943 ORTHO05D010024 8.3e-27 124.0 135 50.4
Gohir.D04G176600 Gossypium hirsutum HOM05D000943 ORTHO05D010024 8.3e-27 124.0 111 59.5
Lj5A262G66 Lonicera japonica HOM05D000943 ORTHO05D010024 8.3e-27 124.0 122 54.9
Atru.chr6.800 Acer truncatum HOM05D000943 ORTHO05D010024 1.4e-26 123.2 73 76.7
Gorai.012G169500 Gossypium raimondii HOM05D000943 ORTHO05D010024 1.4e-26 123.2 121 55.4
Manes.10G118900 Manihot esculenta HOM05D000943 ORTHO05D010024 1.4e-26 123.2 114 59.6
Thecc.02G019300 Theobroma cacao HOM05D000943 ORTHO05D010024 1.8e-26 122.9 133 53.4
MBI09_g28076_MAGBIO Magnolia biondii HOM05D000943 ORTHO05D010024 2.4e-26 122.5 73 80.8
Cc02_g23100 Coffea canephora HOM05D000943 ORTHO05D010024 4.1e-26 121.7 120 55.8
Lsat_1_v5_gn_9_120381 Lactuca sativa HOM05D000943 ORTHO05D010024 1.2e-25 120.2 150 48.0
Manes.07G023600 Manihot esculenta HOM05D000943 ORTHO05D010024 1.2e-25 120.2 136 50.0
TAR628G1147 Trochodendron aralioides HOM05D000943 ORTHO05D010024 1.6e-25 119.8 132 49.2
CDE06G2531 Ceratophyllum demersum HOM05D000943 ORTHO05D024933 3.5e-25 118.6 125 48.0
HanXRQChr01g0027191 Helianthus annuus HOM05D000943 ORTHO05D010024 5.9e-25 117.9 147 44.2
Ah.02g128290 Amaranthus hybridus HOM05D000943 ORTHO05D010024 1.0e-24 117.1 122 50.8
Sed0011001 Sechium edule HOM05D000943 ORTHO05D010024 2.9e-24 115.5 69 81.2
CsaV3_3G006360 Cucumis sativus L. HOM05D000943 ORTHO05D010024 5.0e-24 114.8 71 74.6
MELO3C016505.2 Cucumis melo HOM05D000943 ORTHO05D010024 8.6e-24 114.0 128 49.2
Nn8g40352 Nelumbo nucifera HOM05D000943 ORTHO05D010024 1.1e-23 113.6 73 69.9
Prupe.1G578600 Prunus persica HOM05D000943 ORTHO05D010024 2.5e-23 112.5 99 60.6
ClCG10G007030 Citrullus lanatus HOM05D000943 ORTHO05D010024 5.6e-23 111.3 71 73.2
MELO3C016503.2 Cucumis melo HOM05D000943 ORTHO05D010024 1.6e-22 109.8 73 67.1
ClCG10G007050 Citrullus lanatus HOM05D000943 ORTHO05D010024 2.8e-22 109.0 73 68.5
CsaV3_3G006370 Cucumis sativus L. HOM05D000943 ORTHO05D010024 2.8e-22 109.0 73 68.5
EL10Ac4g08445 Beta vulgaris HOM05D000943 ORTHO05D010024 3.6e-22 108.6 74 68.9
Haze_10048 Corylus avellana HOM05D000943 ORTHO05D010024 1.0e-21 107.1 73 67.1
Potri.003G008700 Populus trichocarpa HOM05D000943 ORTHO05D010024 1.0e-21 107.1 68 75.0
Hund15466 Selenicereus undatus HOM05D000943 ORTHO05D010024 1.4e-21 106.7 69 75.4
ATR0584G051 Amborella trichopoda HOM05D000943 ORTHO05D010024 6.8e-21 104.4 71 67.6
QL02p100337 Quercus lobata HOM05D000943 ORTHO05D010024 1.5e-20 103.2 69 69.6
Sabra03G0004300 Salix brachista HOM05D000943 ORTHO05D010024 1.5e-20 103.2 68 73.5
HPP92_011385 Vanilla planifolia HOM05D000943 ORTHO05D010024 1.5e-20 103.2 73 65.8
Cpa.g.sc113.50 Carica papaya HOM05D000943 ORTHO05D010024 2.6e-20 102.4 135 45.2
DCAR_006674 Daucus carota HOM05D000943 ORTHO05D010024 3.4e-20 102.1 68 73.5
Cfa004493 Carpinus fangiana HOM05D000943 ORTHO05D010024 9.8e-20 100.5 166 41.0
GSVIVG01023255001 Vitis vinifera HOM05D000943 ORTHO05D010024 9.8e-20 100.5 68 67.6
unitig_22.g6855 Utricularia gibba HOM05D000943 ORTHO05D010024 2.7e-17 92.4 72 59.7
Pp3c7_7830 Physcomitrium patens HOM05D000943 ORTHO05D010024 4.6e-17 91.7 73 54.8
AagrBONN_evm.TU.Sc2ySwM_368.1065 Anthoceros agrestis HOM05D004447 ORTHO05D005973 1.0e-16 90.5 90 47.8
Sopen01g046030 Solanum pennellii HOM05D000943 ORTHO05D024933 1.7e-16 89.7 100 48.0
Oeu064607.2 Olea europaea HOM05D000943 ORTHO05D010024 8.0e-14 80.9 137 43.1
Os12g0170300 Oryza sativa ssp. japonica HOM05D000943 ORTHO05D010024 8.9e-13 77.4 65 58.5
SMO230G0059 Selaginella moellendorffii HOM05D000943 ORTHO05D010024 8.9e-13 77.4 71 52.1
Potri.017G069350 Populus trichocarpa HOM05D000943 ORTHO05D024933 5.0e-08 61.6 38 65.8
TPR.G35008 Trifolium pratense HOM05D000943 ORTHO05D008314 1.2e-06 57.0 125 35.2


User provided reference genes

Program Settings