Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g012295.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 1.8e-60 235.7 121 100.0
Solyc08g068270.3 Solanum lycopersicum HOM05D006435 ORTHO05D008262 3.4e-46 188.3 189 60.3
PGSC0003DMG400014515 Solanum tuberosum HOM05D006435 ORTHO05D008262 3.1e-44 181.8 189 58.7
Sopen08g022120 Solanum pennellii HOM05D006435 ORTHO05D008262 9.1e-44 180.3 189 58.7
Solyc10g012245.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 2.7e-43 178.7 185 59.5
Nitab4.5_0000052g0140 Nicotiana tabacum HOM05D006435 ORTHO05D008262 5.5e-41 171.0 166 62.0
CAN.G797.1 Capsicum annuum HOM05D006435 ORTHO05D008262 1.5e-38 162.9 190 54.7
ClCG11G014010 Citrullus lanatus HOM05D006435 ORTHO05D008262 4.0e-31 138.3 113 65.5
Nitab4.5_0003338g0080 Nicotiana tabacum HOM05D006435 ORTHO05D008262 8.9e-31 137.1 207 46.9
Oeu063249.1 Olea europaea HOM05D006435 ORTHO05D008262 2.9e-29 132.1 91 75.8
SalBow4G2069 Salvia bowleyana HOM05D006435 ORTHO05D008262 4.9e-29 131.3 91 73.6
SGA_v2.0_scaffold280G46829 Striga asiatica HOM05D006435 ORTHO05D008262 4.9e-29 131.3 91 73.6
Peaxi162Scf00523g00529 Petunia axillaris HOM05D006435 ORTHO05D008262 6.4e-29 131.0 67 94.0
MSTRG.11716 Avicennia marina HOM05D006435 ORTHO05D008262 4.1e-28 128.3 91 71.4
DCAR_007705 Daucus carota HOM05D006435 ORTHO05D008262 4.1e-28 128.3 91 74.7
Dinv30253 Davidia involucrata HOM05D006435 ORTHO05D004219 4.1e-28 128.3 91 73.6
CSS0040195 Camellia sinensis var. sinensis HOM05D006435 ORTHO05D008262 5.4e-28 127.9 91 73.6
Thhalv10004692m.g Eutrema salsugineum HOM05D006435 ORTHO05D008262 5.4e-28 127.9 91 72.5
Hma1.2p1_0140F.1_g063520 Hydrangea macrophylla HOM05D006435 ORTHO05D008262 5.4e-28 127.9 91 73.6
HPP92_001799 Vanilla planifolia HOM05D006435 ORTHO05D008262 7.0e-28 127.5 91 72.5
GSVIVG01035670001 Vitis vinifera HOM05D006435 ORTHO05D008262 7.0e-28 127.5 91 72.5
Cc00_g17690 Coffea canephora HOM05D006435 ORTHO05D008262 9.2e-28 127.1 91 73.6
TAR624G0864 Trochodendron aralioides HOM05D006435 ORTHO05D008262 9.2e-28 127.1 91 72.5
Eucgr.L02138 Eucalyptus grandis HOM05D006435 ORTHO05D008262 1.2e-27 126.7 146 51.4
AL6G37530 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 1.6e-27 126.3 91 71.4
Carub.0006s2947 Capsella rubella HOM05D006435 ORTHO05D008262 1.6e-27 126.3 91 71.4
CARHR187680 Cardamine hirsuta HOM05D006435 ORTHO05D008262 1.6e-27 126.3 91 71.4
Lj8C603T5 Lonicera japonica HOM05D006435 ORTHO05D008262 1.6e-27 126.3 177 46.9
Sp2g21890 Schrenkiella parvula HOM05D006435 ORTHO05D008262 1.6e-27 126.3 91 71.4
Aqoxy7G01634 Aquilegia oxysepala HOM05D006435 ORTHO05D008262 3.5e-27 125.2 91 72.5
BcaB07g29986 Brassica carinata HOM05D006435 ORTHO05D008262 3.5e-27 125.2 66 89.4
BcaC03g17897 Brassica carinata HOM05D006435 ORTHO05D008262 3.5e-27 125.2 66 89.4
C02p59390 Brassica napus HOM05D006435 ORTHO05D008262 3.5e-27 125.2 66 89.4
BraA02t08928Z Brassica rapa HOM05D006435 ORTHO05D008262 3.5e-27 125.2 66 89.4
QL12p026394 Quercus lobata HOM05D006435 ORTHO05D008262 3.5e-27 125.2 91 72.5
TWI32G0701 Tripterygium wilfordii HOM05D006435 ORTHO05D008262 3.5e-27 125.2 66 90.9
Atru.chr7.2160 Acer truncatum HOM05D006435 ORTHO05D008262 4.6e-27 124.8 186 45.2
Cfa013344 Carpinus fangiana HOM05D006435 ORTHO05D008262 4.6e-27 124.8 91 71.4
CiPaw.07G207200 Carya illinoinensis HOM05D006435 ORTHO05D008262 4.6e-27 124.8 91 72.5
Haze_21849 Corylus avellana HOM05D006435 ORTHO05D008262 4.6e-27 124.8 91 71.4
Glyma.17G190400 Glycine max HOM05D006435 ORTHO05D008262 4.6e-27 124.8 91 71.4
Aa31LG11G4730 Aethionema arabicum HOM05D006435 ORTHO05D008262 5.9e-27 124.4 91 70.3
arahy.Tifrunner.gnm1.ann1.463B8J Arachis hypogaea HOM05D006435 ORTHO05D008262 5.9e-27 124.4 91 71.4
arahy.Tifrunner.gnm1.ann1.W16L9Q Arachis hypogaea HOM05D006435 ORTHO05D008262 5.9e-27 124.4 91 71.4
CsaV3_3G047410 Cucumis sativus L. HOM05D006435 ORTHO05D008262 5.9e-27 124.4 91 71.4
Duzib187G0700 Durio zibethinus HOM05D006435 ORTHO05D008262 5.9e-27 124.4 91 69.2
Nn2g11721 Nelumbo nucifera HOM05D006435 ORTHO05D008262 5.9e-27 124.4 91 69.2
Sed0025420 Sechium edule HOM05D006435 ORTHO05D008262 5.9e-27 124.4 91 71.4
Ciclev10009372m.g Citrus clementina HOM05D006435 ORTHO05D008262 7.8e-27 124.0 91 71.4
MELO3C003582.2 Cucumis melo HOM05D006435 ORTHO05D008262 7.8e-27 124.0 91 71.4
ECA233G4084 Erigeron canadensis HOM05D006435 ORTHO05D008262 7.8e-27 124.0 91 71.4
Eucgr.C01580 Eucalyptus grandis HOM05D006435 ORTHO05D008262 7.8e-27 124.0 66 90.9
MD15G1097700 Malus domestica HOM05D006435 ORTHO05D008262 7.8e-27 124.0 91 71.4
CANSAT80G2129 Cannabis sativa HOM05D006435 ORTHO05D008262 1.0e-26 123.6 66 89.4
THA.LOC104815054 Tarenaya hassleriana HOM05D006435 ORTHO05D008262 1.0e-26 123.6 91 69.2
Migut.A00245 Erythranthe guttata HOM05D006435 ORTHO05D008262 1.3e-26 123.2 91 69.2
Gohir.A05G048400 Gossypium hirsutum HOM05D006435 ORTHO05D008262 1.3e-26 123.2 91 70.3
Gohir.D05G050300 Gossypium hirsutum HOM05D006435 ORTHO05D008262 1.3e-26 123.2 91 70.3
Gorai.009G051800 Gossypium raimondii HOM05D006435 ORTHO05D008262 1.3e-26 123.2 91 70.3
Rhsim02G0182200 Rhododendron simsii HOM05D006435 ORTHO05D008262 1.3e-26 123.2 91 70.3
Lsat_1_v5_gn_6_10980 Lactuca sativa HOM05D006435 ORTHO05D008262 1.7e-26 122.9 167 48.5
Prupe.1G452600 Prunus persica HOM05D006435 ORTHO05D008262 1.7e-26 122.9 91 70.3
Thecc.09G039800 Theobroma cacao HOM05D006435 ORTHO05D008262 1.7e-26 122.9 91 69.2
Glyma.14G141900 Glycine max HOM05D006435 ORTHO05D008262 2.3e-26 122.5 66 87.9
Manes.03G062800 Manihot esculenta HOM05D006435 ORTHO05D008262 2.3e-26 122.5 66 87.9
Potri.018G037300 Populus trichocarpa HOM05D006435 ORTHO05D008262 2.3e-26 122.5 66 87.9
Lj1g0009240 Lotus japonicus HOM05D006435 ORTHO05D008262 3.0e-26 122.1 91 70.3
Lalb_Chr22g0360991 Lupinus albus HOM05D006435 ORTHO05D008262 3.0e-26 122.1 91 69.2
MBI01_g28042_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 3.0e-26 122.1 66 87.9
Phvul.001G078600 Phaseolus vulgaris HOM05D006435 ORTHO05D008262 3.0e-26 122.1 91 70.3
vmacro11085 Vaccinium macrocarpon HOM05D006435 ORTHO05D008262 3.0e-26 122.1 184 44.0
VMungo0647G0379 Vigna mungo HOM05D006435 ORTHO05D008262 3.0e-26 122.1 91 70.3
VMungo1215G1854 Vigna mungo HOM05D006435 ORTHO05D008262 3.0e-26 122.1 91 70.3
Hund19545 Selenicereus undatus HOM05D006435 ORTHO05D008262 3.9e-26 121.7 91 70.3
Actinidia31221 Actinidia chinensis HOM05D006435 ORTHO05D008262 5.0e-26 121.3 199 43.2
Ah.16g105260 Amaranthus hybridus HOM05D006435 ORTHO05D008262 5.0e-26 121.3 91 71.4
AUR62009330 Chenopodium quinoa HOM05D006435 ORTHO05D008262 6.6e-26 120.9 91 71.4
AUR62023016 Chenopodium quinoa HOM05D006435 ORTHO05D008262 6.6e-26 120.9 91 71.4
PSO782G5114 Papaver somniferum HOM05D006435 ORTHO05D008262 6.6e-26 120.9 91 69.2
PGR031G0325 Punica granatum HOM05D006435 ORTHO05D008262 6.6e-26 120.9 66 86.4
PSO832G3386 Papaver somniferum HOM05D006435 ORTHO05D008262 8.6e-26 120.6 91 69.2
Medtr1g008300 Medicago truncatula HOM05D006435 ORTHO05D008262 1.1e-25 120.2 91 70.3
Psat6g034280 Pisum sativum HOM05D006435 ORTHO05D008262 1.1e-25 120.2 91 70.3
EL10Ac2g04073 Beta vulgaris HOM05D006435 ORTHO05D008262 1.5e-25 119.8 91 70.3
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.5e-25 119.8 66 86.4
Cpa.g.sc78.80 Carica papaya HOM05D006435 ORTHO05D008262 1.9e-25 119.4 91 68.1
SEGI_13627 Sequoiadendron giganteum HOM05D006435 ORTHO05D008262 1.9e-25 119.4 66 84.8
TPR.G12017 Trifolium pratense HOM05D006435 ORTHO05D008262 1.9e-25 119.4 91 69.2
AagrBONN_evm.TU.Sc2ySwM_117.700 Anthoceros agrestis HOM05D006435 ORTHO05D008262 2.5e-25 119.0 91 65.9
FvH4_2g36120 Fragaria vesca HOM05D006435 ORTHO05D008262 3.3e-25 118.6 91 67.0
HanXRQChr02g0048091 Helianthus annuus HOM05D006435 ORTHO05D008262 5.6e-25 117.9 91 67.0
FAN20G0337 Fragaria x ananassa HOM05D006435 ORTHO05D008262 7.3e-25 117.5 66 83.3
FAN27G2865 Fragaria x ananassa HOM05D006435 ORTHO05D008262 7.3e-25 117.5 91 65.9
Ca_12811_v3 Cicer arietinum L. HOM05D006435 ORTHO05D008262 9.5e-25 117.1 66 84.8
SMO116G0425 Selaginella moellendorffii HOM05D006435 ORTHO05D008262 9.5e-25 117.1 66 81.8
CDE05G2477 Ceratophyllum demersum HOM05D006435 ORTHO05D008262 1.2e-24 116.7 91 67.0
Zm00001eb350490 Zea mays HOM05D006435 ORTHO05D008262 1.6e-24 116.3 66 83.3
RcHm_v2.0_Chr6g0305751 Rosa chinensis HOM05D006435 ORTHO05D008262 2.8e-24 115.5 91 65.9
Pp3c15_3110 Physcomitrium patens HOM05D006435 ORTHO05D008262 3.6e-24 115.2 66 84.8
Mapoly0109s0030 Marchantia polymorpha HOM05D006435 ORTHO05D008262 4.7e-24 114.8 91 62.6
Os05g0220600 Oryza sativa ssp. japonica HOM05D006435 ORTHO05D008262 4.7e-24 114.8 66 80.3
ATR0315G035 Amborella trichopoda HOM05D006435 ORTHO05D008262 8.9e-23 110.5 188 42.0
Sc09g0009090 Simmondsia chinensis HOM05D006435 ORTHO05D008262 1.5e-22 109.8 66 83.3
Ciclev10010273m.g Citrus clementina HOM05D006435 ORTHO05D008262 2.0e-22 109.4 66 80.3
AL6G37520 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 1.9e-20 102.8 91 60.4
MBI01_g28043_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 7.0e-20 100.9 69 75.4
AT5G25640 Arabidopsis thaliana HOM05D006435 ORTHO05D008262 7.8e-19 97.4 91 57.1
Sabra18G0038100 Salix brachista HOM05D006435 ORTHO05D008262 6.6e-18 94.4 113 50.4
Carub.0006s2351 Capsella rubella HOM05D006435 ORTHO05D008262 4.3e-17 91.7 66 65.2
MBI01_g46977_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 7.3e-17 90.9 74 68.9
PSO782G2728 Papaver somniferum HOM05D006435 ORTHO05D008262 8.1e-16 87.4 66 60.6
COL.COLO4_18696 Corchorus olitorius HOM05D006435 ORTHO05D008262 1.1e-15 87.0 54 81.5
PSO782G5630 Papaver somniferum HOM05D006435 ORTHO05D008262 4.4e-14 81.6 63 58.7
Cre16.g664801 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D008262 5.1e-10 68.2 96 39.6
Peaxi162Scf00523g00528 Petunia axillaris HOM05D006435 ORTHO05D008262 1.9e-09 66.2 52 75.0
PRCOL_00005434 Prasinoderma coloniale HOM05D006435 ORTHO05D008262 2.1e-08 62.8 71 42.3


User provided reference genes

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