Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g012000.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 2.7e-103 378.6 185 100.0
Sopen10g005760 Solanum pennellii HOM05D008877 ORTHO05D006370 1.2e-84 316.6 167 94.0
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.2e-28 129.8 138 45.7
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.8e-28 129.4 138 45.7
Solyc01g060160.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 6.5e-25 118.2 108 54.6
PGSC0003DMG400035061 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.7e-23 112.1 93 58.1
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.0e-22 109.0 88 54.5
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.0e-22 109.0 91 53.8
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 3.3e-21 105.9 133 41.4
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.4e-21 105.5 118 44.1
PGSC0003DMG400014749 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.3e-20 101.7 64 64.1
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-19 99.8 92 51.1
PGSC0003DMG400041897 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.4e-19 99.8 162 37.0
PGSC0003DMG400013120 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.1e-19 99.0 89 56.2
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.0e-19 98.2 83 54.2
PGSC0003DMG400023316 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.2e-16 88.2 110 40.9
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.6e-15 85.9 130 33.8
PGSC0003DMG400027492 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.1e-15 85.1 60 60.0
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.4e-14 84.0 133 36.1
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.3e-14 83.2 81 43.2
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 6.8e-14 81.6 52 63.5
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 8.8e-14 81.3 81 43.2
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.5e-13 80.5 104 40.4
PGSC0003DMG400045208 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.3e-12 77.4 71 46.5
PGSC0003DMG401029166 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.3e-12 77.4 76 46.1
PGSC0003DMG400020925 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.7e-12 77.0 80 51.2
PGSC0003DMG400027282 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.3e-12 75.1 64 57.8
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.3e-12 74.7 70 47.1
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.1e-11 74.3 104 34.6
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 4.1e-11 72.4 117 31.6
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.4e-11 72.0 89 36.0
Solyc05g017910.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 7.0e-11 71.6 124 31.5
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 9.1e-11 71.2 75 42.7
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 9.1e-11 71.2 142 31.0
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 2.0e-10 70.1 84 38.1
CAN.G795.3 Capsicum annuum HOM05D008877 ORTHO05D006370 4.5e-10 68.9 67 53.7
PGSC0003DMG400007963 Solanum tuberosum HOM05D002332 ORTHO05D002509 4.5e-10 68.9 87 40.2
PGSC0003DMG400009170 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.0e-09 67.8 69 47.8
Rhsim10G0065700 Rhododendron simsii HOM05D008877 ORTHO05D006370 1.3e-09 67.4 74 41.9
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.3e-09 67.4 45 57.8
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 1.7e-09 67.0 104 32.7
Sopen07g007680 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-09 67.0 65 50.8
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.3e-09 66.6 52 50.0
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 1.5e-08 63.9 91 37.4
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 1.5e-08 63.9 75 42.7
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 1.9e-08 63.5 128 29.7
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 2.5e-08 63.2 135 33.3
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 3.2e-08 62.8 85 36.5
PGSC0003DMG400043524 Solanum tuberosum HOM05D008032 ORTHO05D000006 4.2e-08 62.4 80 37.5
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 4.2e-08 62.4 83 34.9
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 7.2e-08 61.6 107 31.8
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 7.2e-08 61.6 107 31.8
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 7.2e-08 61.6 107 31.8
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 7.2e-08 61.6 107 31.8
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 9.5e-08 61.2 85 34.1
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 1.2e-07 60.8 81 38.3
Dinv30257 Davidia involucrata HOM05D001880 ORTHO05D004730 1.6e-07 60.5 71 39.4
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 2.1e-07 60.1 75 36.0
PGSC0003DMG400040082 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.8e-07 59.7 54 48.1
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 4.7e-07 58.9 128 28.9
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 2.3e-06 56.6 48 45.8
Peaxi162Scf00097g00028 Petunia axillaris HOM05D000251 ORTHO05D000414 2.3e-06 56.6 46 58.7
PGSC0003DMG400029006 Solanum tuberosum HOM05D000001 ORTHO05D011642 2.3e-06 56.6 69 40.6
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 5.2e-06 55.5 73 31.5


User provided reference genes

Program Settings