Gene: PGSC0003DMG400029006
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400029006
- Transcript Identifier PGSC0003DMT400074603
- Gene Type Coding gene
- Location ST4.03ch09 : 35516605-35523753 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D011642
- #Genes/#Species 30/4
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pacid 37457435
- id PGSC0003DMG400029006.v4.03
- uniprot M1CTX8
Descriptions
- Description T2-type RNase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
| GO:0090502 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, endonucleolytic | |
| GO:0006401 | IBA | GOA Database | RNA catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0033897 | IEA | GOA Database | ribonuclease T2 activity | |
| GO:0033897 | IEA | InterPro | ribonuclease T2 activity | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004521 | IBA | GOA Database | endoribonuclease activity | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IBA | GOA Database | extracellular region |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.5.11.1 | RNA processing.RNA modification.tRNA-derived fragment biogenesis.T2-type RNase (RNS) |