Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 5.9e-124 447.6 234 100.0
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 1.6e-121 439.5 234 98.3
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 3.3e-66 255.8 210 67.1
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 1.6e-65 253.4 237 61.2
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 1.5e-58 230.3 237 57.8
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 1.1e-53 214.2 154 77.9
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 1.1e-45 187.6 205 53.2
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 7.2e-45 184.9 208 50.0
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 2.3e-43 179.9 213 49.3
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 9.7e-42 174.5 207 51.7
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 4.8e-41 172.2 185 50.3
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 6.3e-41 171.8 212 47.2
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 1.8e-40 170.2 213 47.9
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 4.1e-40 169.1 212 45.3
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 6.9e-40 168.3 184 51.1
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 2.0e-39 166.8 212 46.2
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 3.4e-39 166.0 228 42.5
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 3.4e-39 166.0 211 47.4
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 4.5e-39 165.6 240 45.8
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 5.9e-39 165.2 228 42.5
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 5.9e-39 165.2 214 48.1
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 1.0e-38 164.5 212 44.8
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 2.9e-38 162.9 212 44.3
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 6.5e-38 161.8 234 45.3
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 6.5e-38 161.8 220 45.0
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.4e-37 160.6 241 45.6
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 1.9e-37 160.2 208 48.1
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 1.9e-37 160.2 187 48.7
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 7.2e-37 158.3 233 45.5
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 1.2e-36 157.5 179 46.9
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 1.8e-35 153.7 217 44.2
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 3.0e-35 152.9 213 43.2
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 5.2e-35 152.1 178 47.8
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.5e-34 150.6 223 43.0
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 2.0e-34 150.2 208 44.7
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 2.0e-34 150.2 213 43.2
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 3.3e-34 149.4 227 43.6
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 4.4e-34 149.1 235 42.1
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 5.7e-34 148.7 235 42.6
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 2.8e-33 146.4 178 46.6
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 4.8e-33 145.6 229 40.2
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 4.8e-33 145.6 216 41.2
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 1.1e-32 144.4 151 51.7
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.8e-32 143.7 182 46.2
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 3.1e-32 142.9 202 44.1
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 5.3e-32 142.1 216 41.2
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 7.0e-32 141.7 189 44.4
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 9.1e-32 141.4 178 46.1
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 1.6e-31 140.6 208 40.9
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 2.0e-31 140.2 190 41.6
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 2.6e-31 139.8 224 37.9
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 3.5e-31 139.4 208 43.8
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 4.5e-31 139.0 216 40.3
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 4.5e-31 139.0 187 42.2
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 4.5e-31 139.0 175 45.1
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 7.7e-31 138.3 186 45.2
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 1.3e-30 137.5 216 42.1
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 1.7e-30 137.1 206 41.7
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.8e-30 136.0 186 45.2
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 6.5e-30 135.2 242 40.5
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 8.5e-30 134.8 209 40.7
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 1.1e-29 134.4 184 41.3
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 3.2e-29 132.9 204 39.2
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 3.2e-29 132.9 188 41.5
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 4.2e-29 132.5 209 39.7
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 5.5e-29 132.1 186 43.5
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 5.5e-29 132.1 186 38.7
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 7.2e-29 131.7 180 43.3
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 7.2e-29 131.7 230 39.1
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 1.2e-28 131.0 209 41.1
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 2.1e-28 130.2 206 41.7
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 3.6e-28 129.4 223 39.9
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 3.6e-28 129.4 195 41.0
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 3.6e-28 129.4 195 41.0
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 4.7e-28 129.0 209 40.7
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 4.7e-28 129.0 209 40.7
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 4.7e-28 129.0 209 40.7
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 4.7e-28 129.0 214 41.1
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 6.1e-28 128.6 211 39.8
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 2.3e-27 126.7 209 37.8
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 2.3e-27 126.7 246 36.2
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 4.0e-27 125.9 188 44.7
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 5.2e-27 125.6 213 40.8
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 6.7e-27 125.2 164 44.5
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 6.7e-27 125.2 216 38.4
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 6.7e-27 125.2 183 39.3
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 6.7e-27 125.2 219 37.9
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 8.8e-27 124.8 217 37.3
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 1.3e-25 120.9 194 40.7
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 8.2e-25 118.2 231 38.1
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 3.5e-23 112.8 232 34.1
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 2.5e-21 106.7 114 51.8
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 9.4e-21 104.8 187 35.3
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 3.6e-20 102.8 185 39.5
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 8.0e-20 101.7 209 34.4
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 1.8e-19 100.5 219 36.5
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 2.3e-19 100.1 107 50.5
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.5e-18 97.4 188 34.6
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 4.4e-18 95.9 218 33.9
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 1.8e-16 90.5 228 31.6
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 1.0e-14 84.7 152 34.2
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 1.7e-14 84.0 155 34.2
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 1.7e-09 67.4 121 36.4
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 7.0e-08 62.0 180 30.0
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 2.7e-07 60.1 182 29.7


User provided reference genes

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