Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 1.5e-286 988.8 496 100.0
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 9.5e-281 969.5 496 98.2
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.3e-253 879.4 496 88.7
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 5.4e-252 874.0 493 88.4
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 2.6e-230 802.0 489 83.0
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 2.4e-215 752.3 409 91.4
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.2e-182 643.7 493 67.3
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 8.6e-181 637.5 504 67.1
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 2.5e-172 609.4 424 69.3
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 4.3e-172 608.6 494 65.6
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 2.1e-171 606.3 485 63.3
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 1.0e-170 604.0 495 62.8
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 1.8e-170 603.2 425 69.2
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.0e-165 587.4 471 65.2
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 2.1e-163 579.7 426 68.3
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.1e-162 577.4 424 66.7
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.8e-162 576.6 462 63.0
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 8.9e-162 574.3 483 60.7
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 1.5e-161 573.5 430 67.0
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 3.4e-161 572.4 494 60.3
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 5.8e-161 571.6 427 66.3
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 7.5e-161 571.2 433 64.2
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 1.4e-159 567.0 457 62.6
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 1.9e-159 566.6 424 67.0
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 2.4e-159 566.2 554 54.9
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 3.2e-159 565.8 434 64.7
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 5.4e-159 565.1 423 66.2
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 7.1e-159 564.7 453 62.7
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 1.2e-158 563.9 456 61.6
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 1.2e-158 563.9 480 61.0
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 1.2e-158 563.9 424 64.2
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 1.6e-158 563.5 453 62.7
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 2.1e-158 563.1 434 64.1
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 1.7e-157 560.1 434 63.6
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 1.7e-157 560.1 455 61.8
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 6.6e-157 558.1 427 62.3
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 8.6e-157 557.8 423 64.8
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 2.5e-156 556.2 448 62.7
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 2.5e-156 556.2 421 63.7
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 7.3e-156 554.7 449 61.0
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 9.5e-156 554.3 433 64.7
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 2.1e-155 553.1 487 58.9
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 3.6e-155 552.4 481 58.0
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 4.7e-155 552.0 437 63.6
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 8.1e-155 551.2 481 58.0
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 1.1e-154 550.8 429 62.2
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 1.8e-154 550.1 424 63.0
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 1.8e-154 550.1 493 57.2
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 5.2e-154 548.5 423 63.8
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 6.8e-154 548.1 421 62.7
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 1.2e-153 547.4 436 62.6
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 1.5e-153 547.0 455 61.5
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 1.3e-152 543.9 427 62.8
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 1.7e-152 543.5 423 63.8
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 4.9e-152 542.0 428 62.6
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 6.4e-152 541.6 423 63.6
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 8.4e-152 541.2 430 62.8
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 3.2e-151 539.3 455 62.0
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 3.2e-151 539.3 421 63.9
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 5.4e-151 538.5 427 61.6
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.7e-149 533.5 470 57.4
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 2.5e-148 529.6 430 62.3
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 5.6e-148 528.5 512 53.9
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 5.6e-148 528.5 428 61.2
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 7.3e-148 528.1 426 62.2
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 9.6e-148 527.7 429 60.1
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 2.1e-147 526.6 422 60.7
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 6.2e-147 525.0 442 60.4
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 8.1e-147 524.6 430 62.1
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.1e-146 524.2 474 56.5
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.8e-146 523.5 423 60.3
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.4e-146 523.1 422 60.7
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 1.2e-145 520.8 458 59.4
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 2.6e-145 519.6 429 59.2
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 6.4e-144 515.0 433 59.8
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 1.9e-143 513.5 419 62.8
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 2.7e-142 509.6 458 57.6
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 3.0e-141 506.1 393 64.1
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 1.1e-140 504.2 520 53.1
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 1.6e-139 500.4 482 57.3
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 5.3e-138 495.4 426 58.2
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.7e-136 490.3 475 54.5
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 6.4e-136 488.4 448 56.0
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 3.2e-135 486.1 396 61.1
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 1.0e-133 481.1 368 63.6
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 2.3e-133 479.9 374 62.6
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 3.3e-132 476.1 419 57.3
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 1.4e-130 470.7 414 57.5
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 3.4e-129 466.1 421 57.0
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 7.6e-129 464.9 459 52.7
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 2.9e-128 463.0 420 55.5
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 6.0e-126 455.3 368 59.0
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 3.3e-124 449.5 364 59.9
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 1.3e-117 427.6 374 61.8
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.9e-116 423.7 422 53.1
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 8.2e-107 391.7 285 70.2
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.7e-104 384.0 430 48.6
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.8e-104 382.9 427 49.2
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 6.3e-99 365.5 443 44.2
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 1.2e-94 351.3 486 40.7
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.1e-90 338.2 222 73.9
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.8e-88 329.7 302 54.0
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 5.0e-88 329.3 407 44.7
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.1e-87 328.2 441 40.8
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 5.2e-85 319.3 372 48.4
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 9.5e-71 271.9 251 59.0
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.8e-69 267.7 307 48.2
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.1e-63 248.4 201 62.7
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 3.7e-51 206.8 458 34.3
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 3.7e-51 206.8 221 48.4
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 1.2e-49 201.8 442 32.1
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 3.1e-37 160.6 139 61.9
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 1.9e-34 151.4 101 70.3
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 4.6e-33 146.7 111 64.0
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 8.7e-32 142.5 125 57.6
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.9e-29 132.9 149 49.0
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 1.5e-28 131.7 106 57.5
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.9e-24 117.1 406 24.9
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 6.6e-24 116.3 81 70.4
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 1.8e-21 108.2 142 46.5
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.1e-14 84.7 79 58.2
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 4.8e-14 83.6 90 42.2
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 1.5e-12 78.6 75 53.3
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 9.9e-12 75.9 86 59.3
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.9e-11 74.3 53 62.3
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 4.6e-09 67.0 59 66.1


User provided reference genes

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