Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g013070.3 Solanum lycopersicum HOM05D006607 ORTHO05D008166 1.4e-74 282.7 132 100.0
Sopen09g006910 Solanum pennellii HOM05D006607 ORTHO05D008166 8.1e-62 240.4 113 99.1
PGSC0003DMG400020353 Solanum tuberosum HOM05D006607 ORTHO05D008166 3.1e-61 238.4 113 97.3
CAN.G284.7 Capsicum annuum HOM05D006607 ORTHO05D008166 3.5e-49 198.4 115 78.3
DCAR_015459 Daucus carota HOM05D006607 ORTHO05D008166 5.8e-44 181.0 112 71.4
Sabra16G0107200 Salix brachista HOM05D006607 ORTHO05D008166 1.4e-42 176.4 110 73.6
Cfa017259 Carpinus fangiana HOM05D006607 ORTHO05D008166 5.5e-42 174.5 114 69.3
Manes.08G087200 Manihot esculenta HOM05D006607 ORTHO05D008166 6.0e-41 171.0 115 67.0
Potri.016G110600 Populus trichocarpa HOM05D006607 ORTHO05D008166 1.3e-40 169.9 109 70.6
Haze_20943 Corylus avellana HOM05D006607 ORTHO05D008166 1.8e-40 169.5 114 68.4
COL.COLO4_14612 Corchorus olitorius HOM05D006607 ORTHO05D008166 2.3e-40 169.1 102 73.5
Hma1.2p1_0915F.1_g236410 Hydrangea macrophylla HOM05D006607 ORTHO05D008166 2.3e-40 169.1 115 65.2
Lsat_1_v5_gn_5_155401 Lactuca sativa HOM05D006607 ORTHO05D008166 6.7e-40 167.5 110 68.2
COL.COLO4_14613 Corchorus olitorius HOM05D006607 ORTHO05D008166 2.5e-39 165.6 105 72.4
Lj3P942T23 Lonicera japonica HOM05D006607 ORTHO05D008166 3.3e-39 165.2 111 66.7
Peaxi162Scf00330g00043 Petunia axillaris HOM05D006607 ORTHO05D008166 3.3e-39 165.2 113 67.3
CiPaw.09G205500 Carya illinoinensis HOM05D006607 ORTHO05D008166 9.7e-39 163.7 113 66.4
Rhsim05G0205400 Rhododendron simsii HOM05D006607 ORTHO05D008166 9.7e-39 163.7 113 65.5
TWI53G2038 Tripterygium wilfordii HOM05D006607 ORTHO05D008166 9.7e-39 163.7 111 68.5
CSS0045140 Camellia sinensis var. sinensis HOM05D006607 ORTHO05D008166 2.2e-38 162.5 113 65.5
Eucgr.D02079 Eucalyptus grandis HOM05D006607 ORTHO05D008166 2.8e-38 162.2 104 71.2
Oeu040800.1 Olea europaea HOM05D006607 ORTHO05D008166 4.8e-38 161.4 123 60.2
Prupe.6G270300 Prunus persica HOM05D006607 ORTHO05D008166 4.8e-38 161.4 113 64.6
FAN05G5656 Fragaria x ananassa HOM05D006607 ORTHO05D008166 8.2e-38 160.6 111 66.7
FAN02G3588 Fragaria x ananassa HOM05D006607 ORTHO05D008166 1.1e-37 160.2 111 67.6
Lj1g0013091 Lotus japonicus HOM05D006607 ORTHO05D008166 1.1e-37 160.2 113 62.8
AL4G35050 Arabidopsis lyrata HOM05D006607 ORTHO05D008166 1.8e-37 159.5 111 63.1
Cpa.g.sc56.108 Carica papaya HOM05D006607 ORTHO05D008166 1.8e-37 159.5 111 63.1
Medtr4g064025 Medicago truncatula HOM05D006607 ORTHO05D008166 1.8e-37 159.5 110 67.3
MD04G1146500 Malus domestica HOM05D006607 ORTHO05D008166 2.4e-37 159.1 112 63.4
FAN09G0328 Fragaria x ananassa HOM05D006607 ORTHO05D008166 3.1e-37 158.7 111 66.7
Psat0s1978g0160 Pisum sativum HOM05D006607 ORTHO05D008166 3.1e-37 158.7 116 62.9
Aa31LG5G23660 Aethionema arabicum HOM05D006607 ORTHO05D008166 4.1e-37 158.3 111 64.0
Thecc.05G022900 Theobroma cacao HOM05D006607 ORTHO05D008166 4.1e-37 158.3 111 65.8
Carub.0004s2002 Capsella rubella HOM05D006607 ORTHO05D008166 5.3e-37 157.9 111 65.8
Medtr7g066760 Medicago truncatula HOM05D006607 ORTHO05D008166 5.3e-37 157.9 110 65.5
Sp4g20370 Schrenkiella parvula HOM05D006607 ORTHO05D008166 5.3e-37 157.9 111 63.1
Lalb_Chr19g0124781 Lupinus albus HOM05D006607 ORTHO05D008166 6.9e-37 157.5 113 61.1
Cc06_g01710 Coffea canephora HOM05D006607 ORTHO05D008166 9.0e-37 157.1 123 59.3
RcHm_v2.0_Chr3g0463931 Rosa chinensis HOM05D006607 ORTHO05D008166 9.0e-37 157.1 111 64.9
BcaC02g12928 Brassica carinata HOM05D006607 ORTHO05D008166 1.5e-36 156.4 111 63.1
A04p29160 Brassica napus HOM05D006607 ORTHO05D008166 1.5e-36 156.4 111 63.1
C04p66370 Brassica napus HOM05D006607 ORTHO05D008166 1.5e-36 156.4 111 63.1
BolC4t28142H Brassica oleracea HOM05D006607 ORTHO05D008166 1.5e-36 156.4 111 63.1
BraA04t18385Z Brassica rapa HOM05D006607 ORTHO05D008166 1.5e-36 156.4 111 63.1
Migut.J00229 Erythranthe guttata HOM05D006607 ORTHO05D008166 2.0e-36 156.0 114 61.4
MSTRG.19034 Avicennia marina HOM05D006607 ORTHO05D008166 2.6e-36 155.6 114 61.4
Gohir.A04G088000 Gossypium hirsutum HOM05D006607 ORTHO05D008166 3.4e-36 155.2 113 63.7
TPR.G10863 Trifolium pratense HOM05D006607 ORTHO05D008166 3.4e-36 155.2 115 60.9
Thhalv10017092m.g Eutrema salsugineum HOM05D006607 ORTHO05D008166 4.5e-36 154.8 111 62.2
BcaC02g12917 Brassica carinata HOM05D006607 ORTHO05D008166 5.9e-36 154.5 111 62.2
CANSAT35G1770 Cannabis sativa HOM05D006607 ORTHO05D008166 5.9e-36 154.5 105 64.8
Ciclev10013348m.g Citrus clementina HOM05D006607 ORTHO05D008166 5.9e-36 154.5 113 63.7
FAN23G2586 Fragaria x ananassa HOM05D006607 ORTHO05D008166 7.6e-36 154.1 111 64.9
Aqoxy7G01420 Aquilegia oxysepala HOM05D006607 ORTHO05D008166 1.3e-35 153.3 114 60.5
CARHR132620 Cardamine hirsuta HOM05D006607 ORTHO05D008166 1.3e-35 153.3 111 63.1
FvH4_6g12130 Fragaria vesca HOM05D006607 ORTHO05D008166 1.3e-35 153.3 111 64.9
Gorai.012G111500 Gossypium raimondii HOM05D006607 ORTHO05D008166 1.3e-35 153.3 103 67.0
Nn2g13597 Nelumbo nucifera HOM05D006607 ORTHO05D008166 1.3e-35 153.3 113 61.9
Ca_23721_v3 Cicer arietinum L. HOM05D006607 ORTHO05D008166 1.7e-35 152.9 113 59.3
Duzib128G1357 Durio zibethinus HOM05D006607 ORTHO05D008166 2.9e-35 152.1 113 60.2
ECA248G0524 Erigeron canadensis HOM05D006607 ORTHO05D008166 2.9e-35 152.1 104 60.6
AT2G38050 Arabidopsis thaliana HOM05D006607 ORTHO05D008166 3.8e-35 151.8 111 61.3
SGA_v2.0_scaffold85G26768 Striga asiatica HOM05D006607 ORTHO05D008166 6.5e-35 151.0 114 59.6
SalBow4G0305 Salvia bowleyana HOM05D006607 ORTHO05D008166 1.1e-34 150.2 113 61.9
VMungo1383G1434 Vigna mungo HOM05D006607 ORTHO05D008166 1.1e-34 150.2 110 63.6
GSVIVG01034016001 Vitis vinifera HOM05D006607 ORTHO05D008166 1.1e-34 150.2 110 61.8
Gohir.D04G128400 Gossypium hirsutum HOM05D006607 ORTHO05D008166 1.4e-34 149.8 103 66.0
Atru.chr8.2182 Acer truncatum HOM05D006607 ORTHO05D008166 1.9e-34 149.4 111 61.3
ClCG10G021810 Citrullus lanatus HOM05D006607 ORTHO05D008166 1.9e-34 149.4 113 61.1
unitig_27.g24814 Utricularia gibba HOM05D006607 ORTHO05D008166 4.2e-34 148.3 115 58.3
Glyma.07G144400 Glycine max HOM05D006607 ORTHO05D008166 7.2e-34 147.5 113 61.9
Glyma.11G010000 Glycine max HOM05D006607 ORTHO05D008166 7.2e-34 147.5 112 59.8
THA.LOC104806524 Tarenaya hassleriana HOM05D006607 ORTHO05D008166 7.2e-34 147.5 110 59.1
CsaV3_3G034190 Cucumis sativus L. HOM05D006607 ORTHO05D008166 1.2e-33 146.7 110 60.0
PGR031G1704 Punica granatum HOM05D006607 ORTHO05D008166 2.7e-33 145.6 108 61.1
MELO3C009194.2 Cucumis melo HOM05D006607 ORTHO05D008166 3.6e-33 145.2 110 59.1
SHI12779 Sapria himalayana HOM05D006607 ORTHO05D008166 6.1e-33 144.4 112 58.9
Phvul.008G108600 Phaseolus vulgaris HOM05D006607 ORTHO05D008166 7.9e-33 144.1 110 60.0
Sed0009010 Sechium edule HOM05D006607 ORTHO05D008166 7.9e-33 144.1 97 66.0
Potri.013G134433 Populus trichocarpa HOM05D006607 ORTHO05D008166 3.0e-32 142.1 112 57.1
ATR0618G398 Amborella trichopoda HOM05D006607 ORTHO05D008166 3.3e-31 138.7 113 57.5
Solyc10g086500.1 Solanum lycopersicum HOM05D006607 ORTHO05D008166 1.7e-30 136.3 108 60.2
CDE04G3256 Ceratophyllum demersum HOM05D006607 ORTHO05D008166 4.8e-30 134.8 98 62.2
PSO063G7329 Papaver somniferum HOM05D006607 ORTHO05D008166 8.2e-30 134.0 96 60.4
Potri.005G047800 Populus trichocarpa HOM05D006607 ORTHO05D008166 1.1e-29 133.7 101 56.4
PSO832G1405 Papaver somniferum HOM05D006607 ORTHO05D008166 3.1e-29 132.1 111 54.1
Sc07g0006860 Simmondsia chinensis HOM05D006607 ORTHO05D008166 2.6e-28 129.0 110 54.5
Sopen10g035880 Solanum pennellii HOM05D006607 ORTHO05D008166 1.7e-27 126.3 90 67.8
PGSC0003DMG400019202 Solanum tuberosum HOM05D006607 ORTHO05D008166 1.9e-26 122.9 96 62.5
MBI05_g03439_MAGBIO Magnolia biondii HOM05D006607 ORTHO05D008166 2.5e-26 122.5 111 53.2
CAN.G1195.9 Capsicum annuum HOM05D006607 ORTHO05D008166 5.5e-26 121.3 98 58.2
CAN.G1195.8 Capsicum annuum HOM05D006607 ORTHO05D008166 2.1e-25 119.4 98 57.1
CDE02G1809 Ceratophyllum demersum HOM05D000642 ORTHO05D008166 2.7e-25 119.0 106 49.1
Ah.09g227670 Amaranthus hybridus HOM05D006607 ORTHO05D008166 6.1e-25 117.9 110 50.0
AUR62033432 Chenopodium quinoa HOM05D006607 ORTHO05D008166 6.1e-25 117.9 107 48.6
AUR62011054 Chenopodium quinoa HOM05D006607 ORTHO05D008166 3.0e-24 115.5 108 47.2
ATR0582G138 Amborella trichopoda HOM05D006607 ORTHO05D008166 5.7e-23 111.3 84 59.5
HPP92_018606 Vanilla planifolia HOM05D006607 ORTHO05D008166 3.7e-22 108.6 96 51.0
SEGI_31326 Sequoiadendron giganteum HOM05D006607 ORTHO05D008166 1.7e-19 99.8 97 45.4
Nitab4.5_0000008g0640 Nicotiana tabacum HOM05D006607 ORTHO05D008166 2.5e-18 95.9 67 71.6
Nitab4.5_0004827g0020 Nicotiana tabacum HOM05D006607 ORTHO05D008166 2.5e-18 95.9 67 71.6
Os11g0184100 Oryza sativa ssp. japonica HOM05D006607 ORTHO05D008166 2.6e-15 85.9 97 45.4
Nitab4.5_0001911g0020 Nicotiana tabacum HOM05D006607 ORTHO05D008166 7.4e-15 84.3 54 70.4
Mapoly0170s0018 Marchantia polymorpha HOM05D006607 ORTHO05D008166 9.7e-15 84.0 102 37.3
AagrBONN_evm.TU.Sc2ySwM_344.4222 Anthoceros agrestis HOM05D006607 ORTHO05D008166 1.3e-14 83.6 102 32.4
Os01g0851600 Oryza sativa ssp. japonica HOM05D006607 ORTHO05D008166 2.2e-14 82.8 98 41.8
Atru.chr7.292 Acer truncatum HOM05D006607 ORTHO05D008166 3.7e-14 82.0 55 65.5
HanXRQChr12g0376101 Helianthus annuus HOM05D006607 ORTHO05D008166 2.6e-12 75.9 57 59.6
SMO244G0091 Selaginella moellendorffii HOM05D006607 ORTHO05D008166 2.9e-11 72.4 83 38.6
Pp3c6_28890 Physcomitrium patens HOM05D006607 ORTHO05D008166 7.2e-10 67.8 113 31.0


User provided reference genes

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