Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g009290.3 Solanum lycopersicum HOM05D007469 ORTHO05D003360 1.7e-97 360.1 318 100.0
Sopen09g004030 Solanum pennellii HOM05D007469 ORTHO05D003360 1.8e-94 350.1 318 98.7
PGSC0003DMG400002708 Solanum tuberosum HOM05D007469 ORTHO05D003360 1.9e-72 276.9 321 89.1
CAN.G824.9 Capsicum annuum HOM05D007469 ORTHO05D003360 7.2e-64 248.4 316 79.4
Nitab4.5_0001969g0030 Nicotiana tabacum HOM05D007469 ORTHO05D003360 1.7e-57 227.3 334 76.6
Nitab4.5_0004567g0040 Nicotiana tabacum HOM05D007469 ORTHO05D003360 4.2e-56 222.6 329 76.9
Peaxi162Scf00290g00012 Petunia axillaris HOM05D007469 ORTHO05D003360 5.3e-43 179.1 320 66.2
CANSAT64G0136 Cannabis sativa HOM05D007469 ORTHO05D003360 1.5e-29 134.4 252 75.0
CANSAT64G2834 Cannabis sativa HOM05D007469 ORTHO05D003360 2.0e-29 134.0 317 65.3
Cc02_g31090 Coffea canephora HOM05D007469 ORTHO05D003360 1.4e-27 127.9 285 67.7
Lj7C409T15 Lonicera japonica HOM05D007469 ORTHO05D003360 5.4e-27 125.9 304 53.9
Dinv33523 Davidia involucrata HOM05D007469 ORTHO05D003360 1.0e-25 121.7 252 72.2
Eucgr.J02176 Eucalyptus grandis HOM05D007469 ORTHO05D003360 2.3e-25 120.6 259 71.0
Dinv35031 Davidia involucrata HOM05D000028 ORTHO05D000390 2.9e-25 120.2 122 53.3
HanXRQChr15g0488381 Helianthus annuus HOM05D007469 ORTHO05D003360 2.9e-25 120.2 163 46.6
Oeu047333.1 Olea europaea HOM05D007469 ORTHO05D003360 2.9e-25 120.2 252 60.7
Haze_14632 Corylus avellana HOM05D007469 ORTHO05D003360 3.9e-25 119.8 327 61.8
CiPaw.03G035300 Carya illinoinensis HOM05D007469 ORTHO05D003360 1.9e-24 117.5 250 67.2
TWI56G0985 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 2.5e-24 117.1 135 48.9
TAR371G0800 Trochodendron aralioides HOM05D007469 ORTHO05D003360 4.3e-24 116.3 200 76.5
DCAR_013974 Daucus carota HOM05D007469 ORTHO05D003360 1.2e-23 114.8 249 71.9
MSTRG.15502 Avicennia marina HOM05D007469 ORTHO05D003360 3.6e-23 113.2 180 47.2
Lsat_1_v5_gn_4_181880 Lactuca sativa HOM05D007469 ORTHO05D003360 3.6e-23 113.2 330 60.6
Manes.15G180348 Manihot esculenta HOM05D007469 ORTHO05D003360 3.6e-23 113.2 252 61.5
A04p13090 Brassica napus HOM05D007469 ORTHO05D003360 4.7e-23 112.8 140 47.1
Cfa007462 Carpinus fangiana HOM05D007469 ORTHO05D003360 8.0e-23 112.1 315 62.5
EL10Ac8g18402 Beta vulgaris HOM05D007469 ORTHO05D003360 1.0e-22 111.7 168 40.5
BcaB06g27455 Brassica carinata HOM05D007469 ORTHO05D003360 1.0e-22 111.7 137 47.4
C04p46840 Brassica napus HOM05D007469 ORTHO05D003360 3.1e-22 110.2 146 48.6
BolC4t26272H Brassica oleracea HOM05D007469 ORTHO05D003360 3.1e-22 110.2 146 48.6
BraA04t16968Z Brassica rapa HOM05D007469 ORTHO05D003360 6.8e-22 109.0 140 50.7
Sabra16G0184600 Salix brachista HOM05D007469 ORTHO05D003360 8.9e-22 108.6 253 61.7
Sc18g0006210 Simmondsia chinensis HOM05D007469 ORTHO05D003360 8.9e-22 108.6 304 34.2
AL7G49850 Arabidopsis lyrata HOM05D007469 ORTHO05D003360 1.2e-21 108.2 137 52.6
PGR083G2689 Punica granatum HOM05D007469 ORTHO05D003360 1.5e-21 107.8 122 51.6
Sp7g01840 Schrenkiella parvula HOM05D007469 ORTHO05D003360 2.0e-21 107.5 140 50.7
Thhalv10027842m.g Eutrema salsugineum HOM05D007469 ORTHO05D003360 2.6e-21 107.1 137 46.7
Ciclev10013529m.g Citrus clementina HOM05D007469 ORTHO05D003360 3.4e-21 106.7 116 62.1
AT5G40160 Arabidopsis thaliana HOM05D007469 ORTHO05D003360 4.4e-21 106.3 137 46.7
Hma1.2p1_0697F.1_g204960 Hydrangea macrophylla HOM05D007469 ORTHO05D003360 4.4e-21 106.3 228 68.4
Thecc.04G004300 Theobroma cacao HOM05D007469 ORTHO05D003360 7.5e-21 105.5 248 61.7
CsaV3_5G037380 Cucumis sativus L. HOM05D007469 ORTHO05D003360 1.3e-20 104.8 178 44.9
MELO3C021518.2 Cucumis melo HOM05D007469 ORTHO05D003360 1.7e-20 104.4 178 41.0
THA.LOC104805414 Tarenaya hassleriana HOM05D007469 ORTHO05D003360 1.7e-20 104.4 152 39.5
Carub.0007s3552 Capsella rubella HOM05D007469 ORTHO05D003360 2.2e-20 104.0 138 52.9
CARHR261930 Cardamine hirsuta HOM05D007469 ORTHO05D003360 2.9e-20 103.6 137 46.0
Sed0015996 Sechium edule HOM05D007469 ORTHO05D003360 2.9e-20 103.6 182 47.3
SGA_v2.0_scaffold30G12492 Striga asiatica HOM05D007469 ORTHO05D003360 2.9e-20 103.6 121 50.4
GSVIVG01032525001 Vitis vinifera HOM05D007469 ORTHO05D003360 2.9e-20 103.6 229 68.1
Ah.10g030590 Amaranthus hybridus HOM05D007469 ORTHO05D003360 4.9e-20 102.8 249 64.7
MBI14_g12788_MAGBIO Magnolia biondii HOM05D007469 ORTHO05D003360 6.4e-20 102.4 307 62.9
Duzib264G1016 Durio zibethinus HOM05D007469 ORTHO05D003360 8.3e-20 102.1 248 66.1
Atru.chr8.2427 Acer truncatum HOM05D007469 ORTHO05D003360 1.1e-19 101.7 313 55.9
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 1.1e-19 101.7 248 61.3
Lalb_Chr08g0233251 Lupinus albus HOM05D007469 ORTHO05D003360 1.9e-19 100.9 249 70.7
QL02p077481 Quercus lobata HOM05D007469 ORTHO05D003360 1.9e-19 100.9 324 56.2
Hund20037 Selenicereus undatus HOM05D007469 ORTHO05D009499 4.1e-19 99.8 118 47.5
Aqoxy3G00905 Aquilegia oxysepala HOM05D007469 ORTHO05D003360 5.4e-19 99.4 116 44.8
Gohir.D07G225500 Gossypium hirsutum HOM05D007469 ORTHO05D003360 7.0e-19 99.0 251 64.9
Gorai.001G259900 Gossypium raimondii HOM05D007469 ORTHO05D003360 7.0e-19 99.0 251 65.3
Prupe.3G132600 Prunus persica HOM05D007469 ORTHO05D003360 7.0e-19 99.0 251 64.1
Actinidia06038 Actinidia chinensis HOM05D007469 ORTHO05D003360 9.2e-19 98.6 248 65.3
Glyma.11G211316 Glycine max HOM05D007469 ORTHO05D003360 1.2e-18 98.2 253 71.5
Potri.001G295200 Populus trichocarpa HOM05D007469 ORTHO05D003360 1.2e-18 98.2 254 65.4
Gohir.A07G218400 Gossypium hirsutum HOM05D007469 ORTHO05D003360 1.6e-18 97.8 252 67.1
ClCG00G005290 Citrullus lanatus HOM05D007469 ORTHO05D003360 2.0e-18 97.4 180 45.6
ClCG09G018690 Citrullus lanatus HOM05D007469 ORTHO05D003360 2.0e-18 97.4 180 45.6
ClCG09G018760 Citrullus lanatus HOM05D007469 ORTHO05D003360 2.0e-18 97.4 180 45.6
ECA232G1734 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.0e-18 97.4 191 35.6
Ca_02547_v3 Cicer arietinum L. HOM05D007469 ORTHO05D003360 3.5e-18 96.7 251 68.5
MD05G1026500 Malus domestica HOM05D007469 ORTHO05D003360 3.5e-18 96.7 259 72.6
Rhsim10G0026300 Rhododendron simsii HOM05D007469 ORTHO05D003360 6.0e-18 95.9 131 55.0
SalBow7G0002 Salvia bowleyana HOM05D007469 ORTHO05D003360 6.0e-18 95.9 120 55.8
TPR.G666 Trifolium pratense HOM05D007469 ORTHO05D003360 6.0e-18 95.9 290 54.5
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 7.8e-18 95.5 133 49.6
unitig_0.g2798 Utricularia gibba HOM05D007469 ORTHO05D003360 7.8e-18 95.5 197 37.6
VMungo0540G0432 Vigna mungo HOM05D007469 ORTHO05D003360 7.8e-18 95.5 121 45.5
Nn4g22877 Nelumbo nucifera HOM05D007469 ORTHO05D003360 1.0e-17 95.1 68 64.7
Aa31LG9G1510 Aethionema arabicum HOM05D007469 ORTHO05D003360 1.3e-17 94.7 130 46.9
Rhsim10G0026800 Rhododendron simsii HOM05D007469 ORTHO05D003360 2.3e-17 94.0 68 64.7
Medtr2g048680 Medicago truncatula HOM05D007469 ORTHO05D003360 3.9e-17 93.2 142 41.5
Lj1g0016351 Lotus japonicus HOM05D007469 ORTHO05D003360 5.0e-17 92.8 329 59.9
Phvul.006G086600 Phaseolus vulgaris HOM05D007469 ORTHO05D003360 6.6e-17 92.4 122 46.7
Psat0s5166g0040 Pisum sativum HOM05D007469 ORTHO05D003360 8.6e-17 92.0 269 59.1
FvH4_5g31250 Fragaria vesca HOM05D007469 ORTHO05D003360 1.1e-16 91.7 260 64.6
CSS0038198 Camellia sinensis var. sinensis HOM05D007469 ORTHO05D003360 2.5e-16 90.5 261 63.2
AUR62021431 Chenopodium quinoa HOM05D007469 ORTHO05D003360 2.5e-16 90.5 268 63.1
Glyma.18G044300 Glycine max HOM05D007469 ORTHO05D003360 2.5e-16 90.5 258 67.4
arahy.Tifrunner.gnm1.ann1.5026CX Arachis hypogaea HOM05D007469 ORTHO05D003360 3.3e-16 90.1 164 44.5
Migut.K01363 Erythranthe guttata HOM05D007469 ORTHO05D003360 3.3e-16 90.1 71 59.2
CSS0050487 Camellia sinensis var. sinensis HOM05D007469 ORTHO05D003360 4.3e-16 89.7 92 50.0
PSO161G0131 Papaver somniferum HOM05D007469 ORTHO05D003360 4.3e-16 89.7 272 62.1
RcHm_v2.0_Chr7g0226491 Rosa chinensis HOM05D007469 ORTHO05D003360 1.2e-15 88.2 123 48.8
Cpa.g.sc88.45 Carica papaya HOM05D007469 ORTHO05D003360 1.6e-15 87.8 63 66.7
Actinidia36064 Actinidia chinensis HOM05D007469 ORTHO05D003360 4.7e-15 86.3 210 68.1
arahy.Tifrunner.gnm1.ann1.RR2C2G Arachis hypogaea HOM05D007469 ORTHO05D003360 4.7e-15 86.3 199 39.2
HPP92_010841 Vanilla planifolia HOM05D007469 ORTHO05D003360 8.0e-15 85.5 253 64.0
Zm00001eb208780 Zea mays HOM05D007469 ORTHO05D003360 8.0e-15 85.5 246 64.6
COL.COLO4_32001 Corchorus olitorius HOM05D005889 ORTHO05D007495 1.4e-14 84.7 63 65.1
ATR1159G025 Amborella trichopoda HOM05D007469 ORTHO05D003360 2.3e-14 84.0 125 41.6
SEGI_15817 Sequoiadendron giganteum HOM05D005999 ORTHO05D003360 2.3e-09 67.4 63 47.6
VMungo1215G1128 Vigna mungo HOM05D005999 ORTHO05D003360 1.4e-06 58.2 57 40.4
CANSAT01G1435 Cannabis sativa HOM05D005999 ORTHO05D003360 3.1e-06 57.0 58 41.4
CANSAT25G3254 Cannabis sativa HOM05D005999 ORTHO05D003360 6.8e-06 55.8 57 42.1
Zm00001eb170850 Zea mays HOM05D005999 ORTHO05D003360 8.9e-06 55.5 68 38.2


User provided reference genes

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