Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 8.8e-165 583.6 296 100.0
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 3.7e-163 578.2 296 99.3
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 5.5e-143 511.1 294 89.1
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 3.0e-141 505.4 292 88.4
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 2.0e-140 502.7 295 89.5
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 7.5e-116 421.0 296 73.0
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 1.1e-114 417.2 299 73.2
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 3.2e-114 415.6 294 73.5
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 1.0e-112 410.6 292 72.9
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 2.5e-111 406.0 238 85.7
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 5.6e-111 404.8 299 71.2
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 2.8e-110 402.5 299 69.6
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 2.8e-110 402.5 299 71.2
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 2.3e-109 399.4 263 75.7
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 8.9e-109 397.5 295 69.2
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 1.5e-108 396.7 304 70.1
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 2.0e-108 396.4 257 77.0
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 4.4e-108 395.2 241 82.2
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 5.8e-108 394.8 302 70.5
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 7.5e-108 394.4 257 76.7
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 2.2e-107 392.9 293 69.6
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 2.2e-107 392.9 293 69.6
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 2.9e-107 392.5 294 69.4
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 6.4e-107 391.3 257 75.5
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 1.4e-106 390.2 287 71.1
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.9e-106 389.8 273 71.4
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 3.2e-106 389.0 295 68.8
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 4.1e-106 388.7 246 78.0
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 4.1e-106 388.7 240 78.3
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 9.2e-106 387.5 275 71.6
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 2.7e-105 386.0 254 77.6
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 4.6e-105 385.2 295 67.8
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 6.0e-105 384.8 297 67.7
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 1.7e-104 383.3 260 73.5
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 6.6e-104 381.3 295 68.8
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 1.5e-103 380.2 288 70.5
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 2.5e-103 379.4 264 72.7
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 4.3e-103 378.6 305 69.2
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 7.3e-103 377.9 254 74.4
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 2.1e-102 376.3 291 68.0
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 4.7e-102 375.2 245 75.5
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 4.7e-102 375.2 245 75.5
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 4.7e-102 375.2 248 73.0
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 4.7e-102 375.2 254 73.6
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 6.2e-102 374.8 285 68.1
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 8.1e-102 374.4 299 65.9
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 8.1e-102 374.4 249 74.3
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 8.1e-102 374.4 249 74.3
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 8.1e-102 374.4 249 74.3
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 1.8e-101 373.2 256 73.8
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 3.1e-101 372.5 250 76.4
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 8.9e-101 370.9 293 65.9
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 1.2e-100 370.5 290 66.9
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 1.5e-100 370.2 260 72.3
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 5.8e-100 368.2 254 73.2
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 7.6e-100 367.9 298 65.1
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 1.7e-99 366.7 304 64.8
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 1.7e-99 366.7 286 65.7
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 2.9e-99 365.9 307 64.2
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 6.4e-99 364.8 284 65.1
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 8.4e-99 364.4 256 71.9
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 1.9e-98 363.2 284 64.8
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 4.1e-98 362.1 271 66.8
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 2.7e-97 359.4 219 79.9
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 2.7e-97 359.4 288 64.9
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 3.5e-97 359.0 284 64.1
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 4.6e-97 358.6 253 72.3
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 1.7e-96 356.7 248 73.0
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 3.0e-96 355.9 262 67.6
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 5.1e-96 355.1 285 68.8
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 5.6e-95 351.7 289 64.0
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.6e-94 350.1 303 60.7
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 4.7e-94 348.6 292 61.0
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.4e-93 347.1 315 59.7
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 2.4e-93 346.3 247 69.6
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 2.4e-93 346.3 301 61.8
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 8.9e-93 344.4 305 61.3
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 5.8e-92 341.7 244 69.3
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 1.1e-90 337.4 314 60.2
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 3.2e-90 335.9 314 60.2
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 3.5e-89 332.4 269 62.8
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 4.6e-89 332.0 287 59.2
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 1.7e-88 330.1 324 56.2
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 2.5e-87 326.2 294 58.8
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 1.6e-86 323.6 257 66.1
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 6.9e-85 318.2 248 66.9
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 1.3e-83 313.9 250 63.2
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 7.1e-82 308.1 260 63.8
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 1.8e-80 303.5 270 59.3
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 2.3e-80 303.1 215 72.1
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 8.7e-80 301.2 253 62.8
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 6.2e-78 295.0 286 59.4
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 4.5e-76 288.9 242 62.4
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 7.1e-74 281.6 185 72.4
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 7.1e-74 281.6 310 51.6
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.3e-72 276.6 289 54.0
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 5.1e-72 275.4 244 62.3
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.3e-71 272.7 261 57.5
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 1.6e-70 270.4 159 84.9
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 1.0e-67 261.2 205 62.4
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 1.7e-67 260.4 204 65.2
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 2.1e-65 253.4 293 52.2
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 4.6e-65 252.3 253 52.6
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 3.9e-56 222.6 177 66.7
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 2.9e-43 179.9 102 82.4
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 1.8e-40 170.6 131 65.6
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 2.9e-35 153.3 108 70.4
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 1.9e-34 150.6 270 36.7
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 3.6e-25 119.8 197 36.5
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 3.5e-12 76.6 58 67.2
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 1.7e-11 74.3 81 49.4
Aa31LG10G10340 Aethionema arabicum HOM05D002933 ORTHO05D007742 2.6e-07 60.5 266 24.8
VMungo1383G1673 Vigna mungo HOM05D002933 ORTHO05D007742 6.4e-06 55.8 230 23.0


User provided reference genes

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