Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g028870.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 5.8e-39 163.7 79 100.0
CAN.G559.2 Capsicum annuum HOM05D000216 ORTHO05D003638 2.6e-31 138.3 93 76.3
Migut.D01337 Erythranthe guttata HOM05D000216 ORTHO05D003638 2.6e-31 138.3 93 76.3
SalBow1G2877 Salvia bowleyana HOM05D000216 ORTHO05D003638 2.6e-31 138.3 93 76.3
CAN.G993.7 Capsicum annuum HOM05D000216 ORTHO05D003638 7.6e-31 136.7 93 75.3
PGR111G0049 Punica granatum HOM05D000216 ORTHO05D003638 1.7e-30 135.6 93 74.2
Lsat_1_v5_gn_8_19261 Lactuca sativa HOM05D000216 ORTHO05D003638 2.2e-30 135.2 93 74.2
Lsat_1_v5_gn_2_1641 Lactuca sativa HOM05D000216 ORTHO05D003638 2.9e-30 134.8 93 73.1
Oeu028759.1 Olea europaea HOM05D000216 ORTHO05D003638 3.8e-30 134.4 93 74.2
CSS0018496 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003638 4.9e-30 134.0 93 73.1
HanXRQChr00c0492g0575101 Helianthus annuus HOM05D000216 ORTHO05D003638 4.9e-30 134.0 93 73.1
HanXRQChr08g0210201 Helianthus annuus HOM05D000216 ORTHO05D003638 4.9e-30 134.0 93 73.1
HanXRQChr10g0282501 Helianthus annuus HOM05D000216 ORTHO05D003638 4.9e-30 134.0 93 73.1
HanXRQChr11g0326631 Helianthus annuus HOM05D000216 ORTHO05D003638 4.9e-30 134.0 93 73.1
HanXRQChr12g0380621 Helianthus annuus HOM05D000216 ORTHO05D003638 4.9e-30 134.0 93 73.1
HanXRQCPg0579821 Helianthus annuus HOM05D000216 ORTHO05D003638 4.9e-30 134.0 93 73.1
DCAR_032472 Daucus carota HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 73.1
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-29 132.9 93 72.0
MELO3C000995.2 Cucumis melo HOM05D000216 ORTHO05D003638 1.4e-29 132.5 93 73.1
PSO548G0039 Papaver somniferum HOM05D000216 ORTHO05D003638 1.4e-29 132.5 93 72.0
Sed0012920 Sechium edule HOM05D000216 ORTHO05D003638 1.9e-29 132.1 93 72.0
Sed0015108 Sechium edule HOM05D000216 ORTHO05D003638 1.9e-29 132.1 93 72.0
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.9e-29 132.1 93 72.0
Sed0025462 Sechium edule HOM05D000216 ORTHO05D003638 1.9e-29 132.1 93 72.0
Ciclev10013984m.g Citrus clementina HOM05D000216 ORTHO05D003638 3.2e-29 131.3 93 71.0
CsaV3_UNG207830 Cucumis sativus L. HOM05D000216 ORTHO05D003638 3.2e-29 131.3 90 74.4
Nitab4.5_0001639g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 4.1e-29 131.0 93 72.0
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 5.4e-29 130.6 93 72.0
HanXRQChr14g0427991 Helianthus annuus HOM05D000216 ORTHO05D003638 9.2e-29 129.8 93 71.0
HanXRQChr14g0428011 Helianthus annuus HOM05D000216 ORTHO05D003638 9.2e-29 129.8 93 71.0
unitig_91.g26494 Utricularia gibba HOM05D000216 ORTHO05D003638 9.2e-29 129.8 93 72.0
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 1.6e-28 129.0 93 68.8
RcHm_v2.0_CPg0502431 Rosa chinensis HOM05D000216 ORTHO05D003638 1.6e-28 129.0 93 72.0
Sed0022034 Sechium edule HOM05D000216 ORTHO05D003638 1.6e-28 129.0 90 73.3
Ah.10g027620 Amaranthus hybridus HOM05D000216 ORTHO05D003638 2.1e-28 128.6 93 69.9
Ah.10g027780 Amaranthus hybridus HOM05D000216 ORTHO05D003638 2.1e-28 128.6 93 69.9
Ah.10g028520 Amaranthus hybridus HOM05D000216 ORTHO05D003638 2.1e-28 128.6 93 69.9
CDE02G3154 Ceratophyllum demersum HOM05D000216 ORTHO05D003638 2.1e-28 128.6 93 68.8
CAN.G1185.18 Capsicum annuum HOM05D000216 ORTHO05D003638 2.7e-28 128.3 93 72.0
Zm00001eb435250 Zea mays HOM05D000216 ORTHO05D003638 3.5e-28 127.9 93 68.8
Zm00001eb435460 Zea mays HOM05D000216 ORTHO05D003638 3.5e-28 127.9 93 68.8
Zm00001eb435730 Zea mays HOM05D000216 ORTHO05D003638 3.5e-28 127.9 93 68.8
Zm00001eb436810 Zea mays HOM05D000216 ORTHO05D003638 3.5e-28 127.9 93 68.8
Zm00001eb437240 Zea mays HOM05D000216 ORTHO05D003638 3.5e-28 127.9 93 68.8
Zm00001eb438330 Zea mays HOM05D000216 ORTHO05D003638 3.5e-28 127.9 93 68.8
Zm00001eb441010 Zea mays HOM05D000216 ORTHO05D003638 3.5e-28 127.9 93 68.8
Zm00001eb442740 Zea mays HOM05D000216 ORTHO05D003638 3.5e-28 127.9 93 68.8
Lsat_1_v5_gn_3_17360 Lactuca sativa HOM05D000216 ORTHO05D003638 4.6e-28 127.5 93 69.9
Potri.013G139080 Populus trichocarpa HOM05D000216 ORTHO05D003638 7.8e-28 126.7 93 69.9
QL93p0837_0003 Quercus lobata HOM05D000216 ORTHO05D003638 7.8e-28 126.7 93 69.9
Ah.05g176550 Amaranthus hybridus HOM05D000216 ORTHO05D003638 1.0e-27 126.3 93 68.8
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 1.0e-27 126.3 93 68.8
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 1.0e-27 126.3 93 68.8
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 1.0e-27 126.3 93 68.8
ATCG00150 Arabidopsis thaliana HOM05D000216 ORTHO05D003638 1.3e-27 125.9 95 69.5
Solyc10g044560.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 1.3e-27 125.9 90 72.2
Oeu022568.1 Olea europaea HOM05D000216 ORTHO05D003638 1.7e-27 125.6 93 71.0
Solyc00g500335.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 2.3e-27 125.2 84 76.2
BNapus_Darmor_BZH_scaffold_253p00040 Brassica napus HOM05D000216 ORTHO05D003638 3.0e-27 124.8 95 69.5
BolSC29t60571H Brassica oleracea HOM05D000216 ORTHO05D003638 3.0e-27 124.8 95 69.5
BolSC37t60770H Brassica oleracea HOM05D000216 ORTHO05D003638 3.0e-27 124.8 95 69.5
BolSC45t60878H Brassica oleracea HOM05D000216 ORTHO05D003638 3.0e-27 124.8 95 69.5
BolSC45t60935H Brassica oleracea HOM05D000216 ORTHO05D003638 3.0e-27 124.8 95 69.5
BolSC46t60985H Brassica oleracea HOM05D000216 ORTHO05D003638 3.0e-27 124.8 95 69.5
BraSC140t45590Z Brassica rapa HOM05D000216 ORTHO05D003638 3.0e-27 124.8 95 69.5
BraSC143t45679Z Brassica rapa HOM05D000216 ORTHO05D003638 3.0e-27 124.8 95 69.5
BraSC151t45693Z Brassica rapa HOM05D000216 ORTHO05D003638 3.0e-27 124.8 95 69.5
BraSC59t46515Z Brassica rapa HOM05D000216 ORTHO05D003638 3.0e-27 124.8 95 69.5
Lalb_Chr07g0192171 Lupinus albus HOM05D000216 ORTHO05D003638 3.0e-27 124.8 93 69.9
Lalb_Chr09g0335341 Lupinus albus HOM05D000216 ORTHO05D003638 3.0e-27 124.8 93 69.9
CARHR281900 Cardamine hirsuta HOM05D000216 ORTHO05D003638 3.9e-27 124.4 95 68.4
LjContig00489g0001571 Lotus japonicus HOM05D000216 ORTHO05D003638 3.3e-26 121.3 93 68.8
LjContig00318g0018562 Lotus japonicus HOM05D000216 ORTHO05D003638 7.3e-26 120.2 93 66.7
Hund15942 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.6e-26 119.8 93 66.7
Psat0s2754g0240 Pisum sativum HOM05D000216 ORTHO05D003638 2.1e-25 118.6 93 66.7
Psat0s2961g0080 Pisum sativum HOM05D000216 ORTHO05D003638 2.1e-25 118.6 93 66.7
Psat0s3650g0160 Pisum sativum HOM05D000216 ORTHO05D003638 2.1e-25 118.6 93 66.7
Psat1g003880 Pisum sativum HOM05D000216 ORTHO05D003638 2.1e-25 118.6 93 66.7
Psat6g219400 Pisum sativum HOM05D000216 ORTHO05D003638 2.1e-25 118.6 93 66.7
Psat7g033680 Pisum sativum HOM05D000216 ORTHO05D003638 2.1e-25 118.6 93 66.7
Phvul.003G256800 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 6.2e-25 117.1 93 65.6
Lalb_Chr01g0008441 Lupinus albus HOM05D000216 ORTHO05D003638 8.1e-25 116.7 89 68.5
Gohir.A05G086000 Gossypium hirsutum HOM05D000216 ORTHO05D003638 1.8e-24 115.5 85 69.4
Medtr4g051103 Medicago truncatula HOM05D000216 ORTHO05D003638 2.4e-24 115.2 93 66.7
Lalb_Chr06g0173061 Lupinus albus HOM05D000216 ORTHO05D003638 5.2e-24 114.0 90 67.8
BraSC140t45596Z Brassica rapa HOM05D000216 ORTHO05D003638 1.5e-23 112.5 95 63.2
Gohir.A03G085501 Gossypium hirsutum HOM05D000216 ORTHO05D003638 2.6e-23 111.7 85 67.1
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 7.6e-23 110.2 80 71.2
Psat7g038960 Pisum sativum HOM05D000216 ORTHO05D003638 9.9e-23 109.8 93 63.4
Migut.D01412 Erythranthe guttata HOM05D000216 ORTHO05D003638 3.2e-21 104.8 93 64.5
Psat5g134680 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-21 104.8 118 52.5
Sc12g0006390 Simmondsia chinensis HOM05D000216 ORTHO05D004083 3.2e-21 104.8 81 65.4
CAN.G386.26 Capsicum annuum HOM05D000216 ORTHO05D003638 5.4e-21 104.0 77 70.1
CARHR056700 Cardamine hirsuta HOM05D000216 ORTHO05D003638 7.1e-21 103.6 80 63.8
Gorai.001G035800 Gossypium raimondii HOM05D000216 ORTHO05D003638 2.1e-20 102.1 82 62.2
Gohir.D07G034200 Gossypium hirsutum HOM05D000216 ORTHO05D003638 2.7e-20 101.7 84 64.3
SEGI_39734 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 7.8e-20 100.1 90 55.6
SEGI_31125 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.0e-19 99.8 90 54.4
Nitab4.5_0001140g0200 Nicotiana tabacum HOM05D000216 ORTHO05D003638 1.7e-19 99.0 81 64.2
SEGI_36364 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.3e-19 98.6 90 54.4
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 2.3e-19 98.6 78 66.7
HanXRQChr00c0601g0576511 Helianthus annuus HOM05D000216 ORTHO05D003638 1.1e-16 89.7 69 66.7
Sed0006587 Sechium edule HOM05D000216 ORTHO05D003638 1.5e-15 85.9 93 52.7
Lalb_Chr06g0172981 Lupinus albus HOM05D000216 ORTHO05D003638 4.5e-15 84.3 75 61.3
Lsat_1_v5_gn_3_44020 Lactuca sativa HOM05D000216 ORTHO05D003638 2.2e-14 82.0 78 59.0
Solyc01g017520.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 2.9e-14 81.6 41 90.2
HanXRQChr00c0300g0573211 Helianthus annuus HOM05D000216 ORTHO05D003638 8.4e-14 80.1 65 66.2
HanXRQChr07g0188301 Helianthus annuus HOM05D000216 ORTHO05D003638 5.4e-13 77.4 62 66.1
Gohir.D08G103720 Gossypium hirsutum HOM05D000216 ORTHO05D003518 6.7e-11 70.5 82 50.0
Hund30661 Selenicereus undatus HOM05D000216 ORTHO05D003518 6.7e-11 70.5 66 59.1
Hund30710 Selenicereus undatus HOM05D000216 ORTHO05D003518 6.7e-11 70.5 66 59.1
Gorai.013G017800 Gossypium raimondii HOM05D000216 ORTHO05D003638 1.1e-10 69.7 61 60.7
BraSC25t45884Z Brassica rapa HOM05D000216 ORTHO05D003638 1.5e-10 69.3 43 83.7
Nn092s42878 Nelumbo nucifera HOM05D000216 ORTHO05D003638 1.9e-10 68.9 42 76.2
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.3e-10 68.2 42 76.2
Ah.11g051390 Amaranthus hybridus HOM05D000013 ORTHO05D000011 4.3e-10 67.8 42 76.2
arahy.Tifrunner.gnm1.ann1.T8J8BP Arachis hypogaea HOM05D000216 ORTHO05D003638 4.3e-10 67.8 69 50.7
HanXRQChr13g0415501 Helianthus annuus HOM05D000216 ORTHO05D003638 4.3e-10 67.8 40 80.0
Medtr7g116680 Medicago truncatula HOM05D000216 ORTHO05D003638 4.3e-10 67.8 52 67.3
Psat0s1586g0120 Pisum sativum HOM05D000216 ORTHO05D003638 5.6e-10 67.4 61 60.7
Sed0017816 Sechium edule HOM05D000216 ORTHO05D003518 5.6e-10 67.4 39 79.5
HPP92_028442 Vanilla planifolia HOM05D000216 ORTHO05D000634 5.6e-10 67.4 43 72.1
HanXRQChr13g0425811 Helianthus annuus HOM05D000216 ORTHO05D003638 7.4e-10 67.0 59 61.0
CDE02G2969 Ceratophyllum demersum HOM05D000216 ORTHO05D003638 9.6e-10 66.6 42 73.8
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 9.6e-10 66.6 42 76.2
Lj2C1238G11 Lonicera japonica HOM05D000216 ORTHO05D003638 9.6e-10 66.6 42 76.2
Medtr3g029550 Medicago truncatula HOM05D000216 ORTHO05D003638 1.6e-09 65.9 39 76.9
TPR.G20776 Trifolium pratense HOM05D000216 ORTHO05D003638 2.8e-09 65.1 36 83.3
Nitab4.5_0002175g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 3.7e-09 64.7 38 78.9
BolC2t10572H Brassica oleracea HOM05D000216 ORTHO05D003638 4.8e-09 64.3 43 79.1
AUR62012105 Chenopodium quinoa HOM05D000216 ORTHO05D003638 4.8e-09 64.3 42 73.8
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 4.8e-09 64.3 42 73.8
MD16G1263300 Malus domestica HOM05D000216 ORTHO05D003638 4.8e-09 64.3 39 76.9
Manes.13G021650 Manihot esculenta HOM05D000216 ORTHO05D003638 6.2e-09 63.9 36 83.3
arahy.Tifrunner.gnm1.ann1.M78D68 Arachis hypogaea HOM05D000216 ORTHO05D003638 1.8e-08 62.4 36 80.6
HPP92_007916 Vanilla planifolia HOM05D000216 ORTHO05D003638 1.8e-08 62.4 71 47.9
Gohir.A10G169433 Gossypium hirsutum HOM05D000216 ORTHO05D003638 5.3e-08 60.8 34 79.4
TPR.G8668 Trifolium pratense HOM05D000216 ORTHO05D003638 5.3e-08 60.8 36 75.0
SMO086G0032 Selaginella moellendorffii HOM05D000216 ORTHO05D003638 6.9e-08 60.5 81 43.2
CAN.G517.19 Capsicum annuum HOM05D000216 ORTHO05D003638 9.0e-08 60.1 31 87.1
Hund01856 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.0e-08 60.1 61 52.5
arahy.Tifrunner.gnm1.ann1.TG7LSU Arachis hypogaea HOM05D000216 ORTHO05D003638 1.2e-07 59.7 39 69.2
Lalb_Chr18g0049741 Lupinus albus HOM05D000216 ORTHO05D003638 1.2e-07 59.7 57 54.4
Medtr3g029530 Medicago truncatula HOM05D000001 ORTHO05D000003 1.2e-07 59.7 40 75.0
MD16G1100100 Malus domestica HOM05D000216 ORTHO05D003638 1.5e-07 59.3 39 71.8
Hund01860 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.5e-07 59.3 62 50.0
Hund30593 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.5e-07 59.3 62 50.0
BraA07t28397Z Brassica rapa HOM05D000216 ORTHO05D028337 3.4e-07 58.2 34 82.4
Psat2g044440 Pisum sativum HOM05D000216 ORTHO05D003518 7.6e-07 57.0 36 75.0
SEGI_01684 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 6.4e-06 53.9 46 52.2
SEGI_13281 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 6.4e-06 53.9 50 52.0
SEGI_23567 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 6.4e-06 53.9 46 52.2
SEGI_02904 Sequoiadendron giganteum HOM05D000743 ORTHO05D000580 8.4e-06 53.5 46 52.2


User provided reference genes

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